Asol106973.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720680.1:82072728-82074650[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.6e-10 3e-08 36.4 0.0 3 40 17 54 15 57 0.91
Sequence Information
- Coding Sequence
- ATGGTTCGAGTATATGAAAGAAAGACAAATAGGCAGTCCTGGTCAATCGAGTCGATGAGTAATGCTGTTGAAGCGGTGATTTCTGGACAATTGGGTTATGTAAAGGCTTCAGTTCAATTCAATGTTCCCCAAACTACGCTGGaacgatatgtgaagaaaaaaaggGAAAATCCTGAGCACTGTATTGACAAGACTGCTGGAAAATTCCAAGCAGTGTTTACCCAAGAGCAGGAACATGAGCTAGTAAACTACCTGAAAACTATGGAAGCACGATTATTCGGTTTGACAATGAAAGACTTACGTACTCTCGCGTATCAATTAGCGGCAAGAAATGGAATAGATCACAGATTTAAAAATCAAATGGCTGGCCAAGATTGGGCCAATGGATTTTTAAAGAGAAATCCTTCTCTTTCAATTCGTCAACCTGAGTCAACATCTGGCGCAAGGGCTATGGGATTTAACAAAGTAGCAGTTGATAATTTCTTTTCGTTGCTTACAAATTTGGTAGATAAGTACAAACTTACAGCTTCGCAAATATTTAATTGTGATGAAACTGGGGTTTCAGTAAATCCCAAGAATAATTCTAAAATCATTGCTTGTAAGGGCAAGCGACAAGTCGGTTCATTAACCTCGGCCGAAAGAGGTGAAACCGTAACTTGCCTTATTTGCATGTCTCCTAGTGGAGCATACATGCCACCGATGTTAATTTTTCCAAGGAAAAAAATGCAGAAAGAGTTTGAGCTGGGATTACCTCCAGGGAGTTGGGCTGAAGTGCACAGCACTGGATGGATGACTGCAGAGTTGTTTTTGATATGGTTTAAAAAGTTTGTAGGCATCAAAGGAATTCCCGGTTCTTCTCATTTAGACGGACACTCAACACACACAAAGAACCTTGAGGTTATAGACTATGCGAGAAAGAATGGCGTATCATTGCTGTGTTTACCACCGCACTGTTCTCACAGACTTCAGCCACTTGACGTGTCCTTCATGAAGCCTTTAAGTGTTCATTACACTGAAGAGCTTCGAAAGTGGCTACGTATGAATCCAGGGAAAGTCGTAACGTTGTTTCAAATTTCAACTCTTTTTGGATCAGCCTTTATTCAAAGCGCGACTATGAAGACAGCCATTAATGGATTTCAAGCTACAGGGATTTGGCCCACTGATCGATCTGTTTTCATTGAGTCTGATTTTCTCCCCGCGGATGTGACTGACATCGAACAAACTGTACCTTCAACGCAAGAGACTGTCTCATCTGAAAATGGACAATTGGAATCGTCTTCGTCTATCTTGCTTGGTGAAGAGAACGATGCATCAACATTGGGTGATAAAGGTGATAATAGTGAGGTTTCTACCCATGATATTAATGGTACACCAGCTAAAAAGGTCCTATTTGTTGAGAACATTAATGTCACACCTGGATGCTCATGGATGTCAACTAAGAAGGTTGACTCAGCATTTCCTGTTTCACCTGAAATTCAAATGCCTCTCCCTAAAGTCAAAGGAAGAACAAGAAGAACTAATCGAAAAAGAGGGAGGACTGCTGTCTTAACAGATTCGCCGTACAAAAGAGAGTTAGAGACTGCtataaaagagaaagaagaaaagaggatCGCCAAAGAAGAAAGAGCAAAactaaggctttttaaaaaagaaaacaaagataAGATTGGAAAAACTAAAGGACAGTGtctgaagaaaaataaaaacattaagaaGCCAAAGAAACAAACCGAAAATAACGAGTGTGATTCTGATGAATGCTCAGAGTGTGAGTGTTTATACTGCAACGAGTTCTACTCAAAGTCAAATGAGGGTTGGGTTGCGTGTTCAGTGTGTGGGAAATGGGCCCACAATTCCTGTGCCGGAGTGGACAGCGAGGACGATGAAGCTATACTTGTGTGTGAACTGTGTGAATCAGATTAA
- Protein Sequence
- MVRVYERKTNRQSWSIESMSNAVEAVISGQLGYVKASVQFNVPQTTLERYVKKKRENPEHCIDKTAGKFQAVFTQEQEHELVNYLKTMEARLFGLTMKDLRTLAYQLAARNGIDHRFKNQMAGQDWANGFLKRNPSLSIRQPESTSGARAMGFNKVAVDNFFSLLTNLVDKYKLTASQIFNCDETGVSVNPKNNSKIIACKGKRQVGSLTSAERGETVTCLICMSPSGAYMPPMLIFPRKKMQKEFELGLPPGSWAEVHSTGWMTAELFLIWFKKFVGIKGIPGSSHLDGHSTHTKNLEVIDYARKNGVSLLCLPPHCSHRLQPLDVSFMKPLSVHYTEELRKWLRMNPGKVVTLFQISTLFGSAFIQSATMKTAINGFQATGIWPTDRSVFIESDFLPADVTDIEQTVPSTQETVSSENGQLESSSSILLGEENDASTLGDKGDNSEVSTHDINGTPAKKVLFVENINVTPGCSWMSTKKVDSAFPVSPEIQMPLPKVKGRTRRTNRKRGRTAVLTDSPYKRELETAIKEKEEKRIAKEERAKLRLFKKENKDKIGKTKGQCLKKNKNIKKPKKQTENNECDSDECSECECLYCNEFYSKSNEGWVACSVCGKWAHNSCAGVDSEDDEAILVCELCESD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00065761;
- 90% Identity
- iTF_00065761; iTF_00065698; iTF_00065545; iTF_00065769; iTF_00065770; iTF_00065773; iTF_00065774; iTF_00065775; iTF_00065776; iTF_00065777; iTF_00065778; iTF_00065715; iTF_00065716; iTF_00065749; iTF_00065718; iTF_00065719; iTF_00065783; iTF_00065720; iTF_00065784; iTF_00065721; iTF_00065725; iTF_00065726; iTF_00065763; iTF_00066829; iTF_00065711; iTF_00065714; iTF_00065690; iTF_00065692; iTF_00065695;
- 80% Identity
- -