Asol085461.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720678.1:150999047-151000978[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.6e-10 1.9e-08 37.0 0.0 3 39 20 56 20 58 0.95
Sequence Information
- Coding Sequence
- ATGGTCCGCACCTACAAGAGGTTGCCTGGTCGCAAATTAAGGAGGGATTATCCATTAGACCACCTTGAAGATGCTCTCAGAGATGTTGTGGAAGGAAGTTTCTCTTTTGGACAAGCAGCAGAACGGCATGGGGTGCCGAAAACTACCCTTTATCGGCGGTATCGAGGTCTAAATTTGGACATATTGGGGAAACCACCAGTTCTGAGTCACAttgatgaaaaaaaaattgttcatgCCTTGTTAGTTGCGTCAAGTTTTGGATATCCATTTCCTCCGGGTTCGCTGAGATACTTTGTTCGAGAATATTTAAACAGAAGAGGGCTTACAATCAAATGTTTCCAAGATAATCTTCCTGGTAAAGAATGGGTACGAAATTTTATGACAAGACACAATGAATTATCTGTAAGAAATTCCGAGAATATTAAGAGAAGCCGGGCTGAACTATCACCTGAAATTGTTAACAATTATTTCAAtgaattagaagaatctattGGGGAGGTACCGCCACAGAATATCATTAATTATGATAAATCAGGACTAGTTGATGATCCCGAAAAACAGTCTGTAATTTTAAGAAAGGGAGTTAAGCATGCCTATAAAATTATCGACAGTTCAAAAGCTCACACTTCTGTGATGTTCGCAGCTGCTGCAGATGGGACTTTACTGCCCCCATACATTGTTTATAAAGCCACCAATTATTATCCCGAGTGGGTGGAGAGTGGTCCAACTGGAGCCTGTTATAATCGATCAACAAGCGGGTGGTTTGATGGCTTTATTTTTGAAGATTGGTTCAACAAAATAGCTTTACCATTTTTGAGGAGATTGGATTGTAAAAAGTTATTAATCGGAGATAATTTGTCTAGCCACCTTTCCGAAACTGTTGTACAAGCTtgtgaaagaaataatataagttttatatttttacccGCCAATAGCACCCACGTGTGTCAACCCCTAGATGTGGGATTTTTTGGTCCATTGAAGGGTGCTTGGAAAAAGACCCTATCtgcatggaaagaaaaaaataagggTACTTTATCCAAAACTGCTTTTCCAAGTGTGCTAAAAAAAACATTGGAAACGTTAGGCTCTAAAATAGAAGCGAACATTTTGGCAGGGTTTAGAGGAGCTGGAGTATTACCACTTGATAGACATCAGGTTCTCAAGCGATTGATCGGAGCAGCACCACCTGACATCGTAGGACAGGATGCAGCCTTAGTACAATCATTTACAAATATTATGGAGACAACAACTGGAGCTAAAGAAAAACCTAccacaaaaagaagaaaaaaaattaatgtgcCTCCAGGTAGATCAGTTACAACAAAcgatttttaccaaaataataataacgaaaCCGAAGAGACTGAAAGTATTTATGAGACTGAACAATGCAATGAAGATAGTCTGACTAATGCTAGTATTATAAATCAAGAAAatcaaagtattaaaaatataaacataaattacGAACCTTTGGAAGATacagatgaagaagaagaagaggaaacaTCTCAACTTCCAGAGTGCAGTGGAATAATAAATGTCTGTGATACAAACAATGATAAAAAACAACCTCAACCCAGCGATATTATTGTCAATACTTTTGTGATTGTTAGCTTTTTGTacaatatgaacacaaaaaaagaGACAAGCAAAGAATTTGTGTCAAAGATAGTTAAATGTTTGGAAAATCAAACATATGAAATTTTGTGCCTCAGAAATTATAATGGAAAAAAAGACACTTTTACTTTTCCATTAATAGAAGACAAAAACATTATTCcctttaaacaaataaaatggatTCTACCTCAGCCACTAGTTTTTAGAGGACGTTACAGAGATTTACATGTATTTGTTATGCGTTTTTACCAAAGAAATAAAGCATATGGAACGACAAATTTAGTGTTTCACCATTATAATACTTTTTGA
- Protein Sequence
- MVRTYKRLPGRKLRRDYPLDHLEDALRDVVEGSFSFGQAAERHGVPKTTLYRRYRGLNLDILGKPPVLSHIDEKKIVHALLVASSFGYPFPPGSLRYFVREYLNRRGLTIKCFQDNLPGKEWVRNFMTRHNELSVRNSENIKRSRAELSPEIVNNYFNELEESIGEVPPQNIINYDKSGLVDDPEKQSVILRKGVKHAYKIIDSSKAHTSVMFAAAADGTLLPPYIVYKATNYYPEWVESGPTGACYNRSTSGWFDGFIFEDWFNKIALPFLRRLDCKKLLIGDNLSSHLSETVVQACERNNISFIFLPANSTHVCQPLDVGFFGPLKGAWKKTLSAWKEKNKGTLSKTAFPSVLKKTLETLGSKIEANILAGFRGAGVLPLDRHQVLKRLIGAAPPDIVGQDAALVQSFTNIMETTTGAKEKPTTKRRKKINVPPGRSVTTNDFYQNNNNETEETESIYETEQCNEDSLTNASIINQENQSIKNININYEPLEDTDEEEEEETSQLPECSGIINVCDTNNDKKQPQPSDIIVNTFVIVSFLYNMNTKKETSKEFVSKIVKCLENQTYEILCLRNYNGKKDTFTFPLIEDKNIIPFKQIKWILPQPLVFRGRYRDLHVFVMRFYQRNKAYGTTNLVFHHYNTF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00065671; iTF_00065705; iTF_00065675; iTF_00065708; iTF_00065710; iTF_00065712; iTF_00065397; iTF_00066043; iTF_00065694; iTF_00065823; iTF_00065697; iTF_00065635; iTF_00065700; iTF_00065701; iTF_00065673; iTF_00065709; iTF_00066732; iTF_00065615; iTF_00065682; iTF_00065688; iTF_00065627;
- 90% Identity
- iTF_00065671;
- 80% Identity
- -