Asol003271.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720675.1:14242161-14242973[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-10 1.5e-08 37.4 0.0 4 41 18 56 15 59 0.88
Sequence Information
- Coding Sequence
- aTGGTTCGAACTTATGTTAGGAAGAGTGAGAGACAAAAATGGGATTCAAATGCAATGCAAATGGCAGTTGAAGCGGTTTTATCATCTGAAATGGGGTTTTTGAAGGCAGCTAAGCAATATAACGTACCGAAAACAAGTCTTGAAAGATATGTAAAAAAGGTAAAGAACAATCTTGACTACAAAGTagataaatcagatggaaaatataaaaacgTTTTCACATCAGAACAGGAAGAAGAACTTGCTTCGTATCTTAAAACGATGGAGTGTAGACTTTTTGGCCTCACAATGAAAGATCTTAGATCACTTGCCTATGAACTGGCAGAGAAAAATGGTATGGCGCACAGATTTAACAAAGACACGTGTCTAGCAGGGCAAGATTGGGTTAAAGGTTTCCTTTCTAGGCATCCTACCTTGTCAATTCGTACTCCAGAAAATACTAGTGGCGCACGTGCTATGGGGTTTAATAAAGTTTCAGTTGCACAATTCAATTCTCTTCTAAACAAAGTTATTGCTGAGCACAAGCTGACTgctgaaaaaatatttaacagcGATGAAACTGGTGTTTCGATCAACCCAAAAAGTCAGTCTAAGATAATAGCACTTAAAGGAAAAAGGCAAGTTGGATGTATAACATCTGCAGAACGCGGTGAGACAGTGACAGCGGAGGTATGCATCTCGGCATCTGGATTGTACATGCCTCCAATGCTTATCTTCCCAAGAAAGAAGAAACAGCAAGAGTTCGAATTGGGGCTGCCTCCAGGAGGTTGGTGGAGTAATCCTTCTATATCTCCCACCTCACACATCGCATAA
- Protein Sequence
- MVRTYVRKSERQKWDSNAMQMAVEAVLSSEMGFLKAAKQYNVPKTSLERYVKKVKNNLDYKVDKSDGKYKNVFTSEQEEELASYLKTMECRLFGLTMKDLRSLAYELAEKNGMAHRFNKDTCLAGQDWVKGFLSRHPTLSIRTPENTSGARAMGFNKVSVAQFNSLLNKVIAEHKLTAEKIFNSDETGVSINPKSQSKIIALKGKRQVGCITSAERGETVTAEVCISASGLYMPPMLIFPRKKKQQEFELGLPPGGWWSNPSISPTSHIA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00065933;
- 90% Identity
- iTF_00065801; iTF_00065702; iTF_00065933; iTF_00066065;
- 80% Identity
- -