Asol137376.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720683.1:12564250-12566941[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-10 9.8e-09 38.0 0.0 1 45 12 56 12 56 0.93
Sequence Information
- Coding Sequence
- ATGGAGCCAAAACGTTACCAAAGATTCTGTTACACAGAAGCCATATTACAAGAGGCATTAAATTTAATCCGAGAGGGTAAAATATCACTAAATAAAGCTCACAAAGATTATGGAATTCCAAAGGGCACATTGcacaacaaattaaaagaaaaggtccCACGGCAACGGAAAATGGGTCCTCCGACAGTTCTGACCGAGCAAGAGGAAAATAAGATTGAAGAATGGATTCTACAAAAtgccaaagttggttttcctctgCATCCTGATGCTGTGAGAGATTCGGTGCAAAAATTTTTAAAGAGCAGCAAGAGACCAAATCCATTTACTGATTCTAGACCTGGAGTAAAATGgtttaatttattcttgaaaCGTCACAAACATATTGTTTTGAAAAACGCCGAAGTAATTTCAAAATCTAGAGCTACAGTGAATGAAGAGAGCATAAGGAAATGGTTTAGTgagcttgaaatatttttaagagaaaataacTGCTTCGAAATGATGGAAGATCCAAGCAGAATTATGAACTGCGATGAAACCGGTGTACAAACTTGCCCAAAGAGTGGAAAACTGCTAGGacctaaaaacatgaaaaatttttatGAAGTGGTCACAGGTTCAGAAAAAGAAAGCATTACTGTGCTGTGCACCTTTAATGCTAACGGGGAACGGATACCACCGATGGTAATTTTTCCATTCAAAAGATTACCTACTCATATTATCAACAATATGTTCGATGACTGGGCGGTTGGTCGTTCGGATACAGGCTGGATGGTTTCTAGTACTTTTTACGAGTATGTTGCAAACGTACTTCATCCCTGGTTGCTAGATAAAAAAGTACAGTTCCCAGTCATCTTATTTTTAGATGGACATAAGAGTCATTTAAGTATAGAATTGGCAGATTTTTGCAGAGAAAAAGGAATTCATCTTTACTGTCTCCCCCCGAATGCGACGCATATCATTCAACCTTGCGACGTGGCTATATTTAAACCACTTAAAACCTATTGGATGAAAGCATGTCAAAGTCACAGATCTGAAAAGCCAAAAGTAcccataaacaaaacaaatttcacAGCTATTTTTAAAACGGCCTTCGATATGATATCTACTGACACCATAAAAAATGCCTTTAGAGTTTGTGGCCTATATAAATTGACCTCAGAAGAATCAGTTCCTGTGTCCAGTCAGTCACCAACTGCAGATGATTATAAAACGGCCAAAAGAGTTTTGGATTATGTAATCGGGCAGGAGAATTTAGGAAGCACAGGAAATAACGAACTTAAAGAAATttatacgaaaataaaaaaaagaagtatgATAAGACTACAAAACCTAAATGATGACACCAGTAGCGATCTATCCAGTGTTTTGGATATACAAAGTATGCCAATGGAAATAGACGGTGTATTCAGTCTACATGATTTTGACATTTCCgatacttttgaaaatattgatCTTTTTAATCCTGTACAAAGTGAACagaaaaaaattcatattttgcaaGACATAATTCTAAAGCCCCATAATACAAATACTCCTACTCAACTTCCTTGTATGAAAGAAAATACAACTTCAGAagaaaaagaaacagtaaaagcaGAAAGAGAAAGATATAACGCGGAAAGAGTGGAAGCTGGAGGAGCAAACAGCAATCTTGAAGATGAcaaacaagaagaaaaagaaatgaaaattgaaaaaaatgaagaACTAGAATTACCGGGAGAAGCACATTATTTCCAGTTAGAGAAGGAAGAGTGTCAAATGAAAAAAGTGGAAGAGAAAGAAGTAATACAAGAAACACAAAGTACTGATAAAAACGCTGAAAACGAAGACAATAATGTTGTTACTGAAGAGGAAGAATCTTCAGATGAACTTCTAGAAGAAGAAAACAACGTgaactttaatttacttttggCCGAGAAAAAAATAGATAAACCAAATACAACACCGGAAAAAGATCAATTAGGAAAAGAAAACGAGAATGCGGAAAGTTCCTCAGTAAATGATTTATGGACTAAACATCTCTCATGGCCCAGACTTGATGACAGTaatacaaaaaagaagtcaaaagaaaacaaagttaGAATACCATATGCTATAACGTCCAAGAAATGGAAAGAAATTCAGGAAAAGAAAGAATCTGAGCGTCTTGAGAAACAAAGATTAATTGAGAAAAAACGTGAAGCTAGGAAAAAGAGGAAGCTAGAACCGAATACTAAAAAAGATAAGACCCAAAAAAGAAAGGTTTCTGTTGATGATAAAATTGGTCCTACTTTGGACAAGAAAATGAAAACTCATGTACgagtaaaaaaaaatgtcatcGAAATTGAAGCAGAAAGTTGGCAAGAAAATCCAACAGataatagaaaagaaatattaagtgACAGTAAATATAACGCTGGTGACTATGTTATTGTGCAATATGAAAATTCACATTTTCCgggtgttattaaaaatataagaaaagctgAATACGAAGTTTCAGTTATGTGGCCTTGTGGAGACGATAAATTTAAATGGCCATCGAAAAGGGATGTGCTTTGGTATAAATTTAAatctatcaaagaaaaaataaacattcCCCAGGCATCGAACGATTTATTCTCTGTAccagaaatgaaaaaatatgcTAATGAATAA
- Protein Sequence
- MEPKRYQRFCYTEAILQEALNLIREGKISLNKAHKDYGIPKGTLHNKLKEKVPRQRKMGPPTVLTEQEENKIEEWILQNAKVGFPLHPDAVRDSVQKFLKSSKRPNPFTDSRPGVKWFNLFLKRHKHIVLKNAEVISKSRATVNEESIRKWFSELEIFLRENNCFEMMEDPSRIMNCDETGVQTCPKSGKLLGPKNMKNFYEVVTGSEKESITVLCTFNANGERIPPMVIFPFKRLPTHIINNMFDDWAVGRSDTGWMVSSTFYEYVANVLHPWLLDKKVQFPVILFLDGHKSHLSIELADFCREKGIHLYCLPPNATHIIQPCDVAIFKPLKTYWMKACQSHRSEKPKVPINKTNFTAIFKTAFDMISTDTIKNAFRVCGLYKLTSEESVPVSSQSPTADDYKTAKRVLDYVIGQENLGSTGNNELKEIYTKIKKRSMIRLQNLNDDTSSDLSSVLDIQSMPMEIDGVFSLHDFDISDTFENIDLFNPVQSEQKKIHILQDIILKPHNTNTPTQLPCMKENTTSEEKETVKAERERYNAERVEAGGANSNLEDDKQEEKEMKIEKNEELELPGEAHYFQLEKEECQMKKVEEKEVIQETQSTDKNAENEDNNVVTEEEESSDELLEEENNVNFNLLLAEKKIDKPNTTPEKDQLGKENENAESSSVNDLWTKHLSWPRLDDSNTKKKSKENKVRIPYAITSKKWKEIQEKKESERLEKQRLIEKKREARKKRKLEPNTKKDKTQKRKVSVDDKIGPTLDKKMKTHVRVKKNVIEIEAESWQENPTDNRKEILSDSKYNAGDYVIVQYENSHFPGVIKNIRKAEYEVSVMWPCGDDKFKWPSKRDVLWYKFKSIKEKINIPQASNDLFSVPEMKKYANE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00065386;
- 90% Identity
- iTF_00065563; iTF_00065541; iTF_00065386; iTF_00065556; iTF_00065557; iTF_00065565; iTF_00066174; iTF_00065539; iTF_00065542; iTF_00065831; iTF_00065554; iTF_00065560;
- 80% Identity
- -