Asol044944.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720676.1:189845832-189847487[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-10 1.2e-08 37.7 0.0 3 44 19 61 17 62 0.94
Sequence Information
- Coding Sequence
- ATGCCAACAGAGTATAAAAGAAAAGGAAGTACTAAAAGAGGTGAATGGACAATAGAACAGTTGTCTGCAGCAGTTGCTGCTATAGATAGGGGCGATATGGGAATCCGCGAAGCAGGTCGAGAATTTGGTATATCCGAAGGCACTTTACGACGTCGAAGAAAAAGCAGAGACCTCCAGACTAAAAAGCTTGGGCCGTCATCTACATTAGGAACAGAAAACGAGGCTAAAATTGTGGCacacataaaaaaattacaaaagcacGGGTTTGCACCCACACGGACTTCTGTAAGGTCAATGGCTTTTGAGCTAGCGGAAACTTTGACAATATCACACAAGTTTAATAAAGAATCTCGTAAGGCTGGCTATCCATGGCTAGATTCTTTTTTAAGACGAAATAAGGAACTCTCCATACGAAAATCTGAAGGAGTTTCTGCCGCACGTTCTTTAGCGATGACCAAGgaaaatgttgcatcttatttttcactcCTAGAGCGTACGTTGATTGAAAACGAGCTGATGAGTGAGCCTGGCTGCATTTTCAATATGGACGAGACGGGGCTCCAATTAAACAATCGTCCAGAACATGTTGTAGCTATCAAGGGGTCTAAAAACGTCGCGTCAGTTACTTCTTCTGAAAAAGGAGAGACTATTTCCGTTATTGTTTGCTGCAATGGTGAAGGAGTTTATATTCCGCCAACATgtatttttaaaggaaaaaacaaaaaacctGAGTATCAAGATGGAATGCCTCCTGGATCAACAGTTTATATGTCAAAAAAATCTGCCTATGTAAACAGTGAGATTTTCTTTACTTGGCTGAAGGAGCAATTTGTACCTCGGAAACCAGCAGGAAAAGTACTGTTGTTGTTAGATGGACACTCTTCCCATTGTAGCAACATTGAAATGCTTGAATATGCATCTCAAAATggcgttattttattttgcttgccGAGTCATAGTACTCAGTTTTTACAGCCTTTGGATAGAGGATTCTTTAGGTCCTTGAAGGGGTTTTATTATGAAGCTTGCGATTTGTTTTTAAGGGCAAATCCAGGAAGACGCATTACCAGGCTTCAGTTTGGGAAATTACTTAGTACTGCATGGGAAAAATCTGCCACAATAAAAAACGCAGTGTCCTCATTCAAGGCAACAGGCATAATCCCGTTTGATCCATCTATTATTCCTGATTATGCTTACCTAACAGAGGAGGCATCACAGGCAGAGTTACAATGTCGTCAAAATTCTTTGTCCAATATCATTATGAACAAAACCTCAGATGATCCCACGGTCAGGAGTCGGTCAATCTCACCGCAGCCTAGTTGTTCGACTGAAAAAAAACGTACTCCTGGAAAGCTGTTGGACCAGATATCTCCAGTGCCAGTTGCACGTGCTGTACAAACTACAAGGAAACGTAGTAAACAGCTTGCTGCTATTTTATCGAGCTATGAGCATATatcagaaaagaaaaagaaacaagaaaaaaagggaaGCAGGCGAAGCCATCAAAAGATGTTGAAAGGAAGTCAAGAGCTGGAaagcatattgaaaagaaaaaacaagaacgcATTTATGAATCTTCAGACGATGCAGAGGATGAATCTGAAATTATTTATGATGATTCTTCAACCTACGAAGATGAATCAGACCTTTGTGTAG
- Protein Sequence
- MPTEYKRKGSTKRGEWTIEQLSAAVAAIDRGDMGIREAGREFGISEGTLRRRRKSRDLQTKKLGPSSTLGTENEAKIVAHIKKLQKHGFAPTRTSVRSMAFELAETLTISHKFNKESRKAGYPWLDSFLRRNKELSIRKSEGVSAARSLAMTKENVASYFSLLERTLIENELMSEPGCIFNMDETGLQLNNRPEHVVAIKGSKNVASVTSSEKGETISVIVCCNGEGVYIPPTCIFKGKNKKPEYQDGMPPGSTVYMSKKSAYVNSEIFFTWLKEQFVPRKPAGKVLLLLDGHSSHCSNIEMLEYASQNGVILFCLPSHSTQFLQPLDRGFFRSLKGFYYEACDLFLRANPGRRITRLQFGKLLSTAWEKSATIKNAVSSFKATGIIPFDPSIIPDYAYLTEEASQAELQCRQNSLSNIIMNKTSDDPTVRSRSISPQPSCSTEKKRTPGKLLDQISPVPVARAVQTTRKRSKQLAAILSSYEHISEKKKKQEKKGSRRSHQKMLKGSQELESILKRKNKNAFMNLQTMQRMNLKLFMMILQPTKMNQTFV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00065569; iTF_00065618; iTF_00065620; iTF_00065664; iTF_00065633; iTF_00065634; iTF_00065636; iTF_00065637; iTF_00065638; iTF_00065639; iTF_00065640; iTF_00065641; iTF_00065642; iTF_00065643; iTF_00065644; iTF_00065645; iTF_00065646; iTF_00065647; iTF_00065648; iTF_00065649; iTF_00065650; iTF_00065651; iTF_00065652; iTF_00065653; iTF_00066165; iTF_00065622; iTF_00065654; iTF_00067894; iTF_00065591; iTF_00065655; iTF_00065687; iTF_00065624; iTF_00065656; iTF_00065657; iTF_00066105; iTF_00065658; iTF_00065659; iTF_00065628; iTF_00065660; iTF_00066077; iTF_00065662; iTF_00065663; iTF_00065632; iTF_00065602; iTF_00065613;
- 90% Identity
- iTF_00065628;
- 80% Identity
- iTF_00065591;