Asol102878.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720680.1:36566714-36567979[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-10 1.8e-08 37.2 0.0 3 40 17 54 15 57 0.91
Sequence Information
- Coding Sequence
- ATGGTTCGAGTATATGAAAGAAAGACAAATAGGCAGTCCTGGTCAATCGAGTCGATGAGTAATGCTGTTGAAGCGGTGATTTCTGGACAATTGGGTTATGTAAAGGCTTCAGTTCAATTCAATGTTCCCCAAACTACGCTGGaacgatatgtgaagaaaaaaaggGAAAATCCTGAGCACTGTATTGACAAGACTGCTGGAAAATTCCAAGCAGTGTTTACCCAAGAGCAGGAACATGAGCTAGTAAACTACCTGAAAACTATGGAAGCACGATTATTCGGTTTGACAATGAAAGACTTACTTACTCTCGCGTATCAATTAGCGGTAAGAAATGGAATAGATCACAGATTTAAAAATCAAATGGCTGGCCAAGATTGGGCCAATGGATTTTTAAAGAGAAATCCTTCTCTTTCAATTCGTCAACCTGAGTCAACATCTGGCGCAAGGGCTATGGGATTTAACAAAGTAGCAGTTGATAATTTCTTTTCGTTGCTTACAAATTTGGTAGATAAGTACAAACTTACAGCTTCGCAAATATTTAATTGTGATGAAACTGGGGTTTCAGTAAATCCCAAGAATAATTCTAAAATCATTGCTTGTAAGGGCAAGCGACAAGTCGGTTCATTAACCTCGGCCGAAAGAGGTGAAACCGTAACTTGCCTTATTTGCATGTCTCCTAGTGGAGCATACATGCCACCGATGTTAATTTTTCCAAGGAAAAAAATGCAGAAAGAGTTTGAGCTGGGATTACCTCCAGGGAGTTGGGCTGAAGTGCACAGCACTGGATGGATGACTGCAGAGTTGTTTTTGATATGGTTTAAAAAGTTTGTAGCATTTTCTAAGGCATCAAAGGAATTCCCGGTTCTTCTCATTTTAGACGGACACACAACACACACAAAGAACCTTGAGGTTATAGACTATGCGAGAAAGAATGGCGTATCATTGCTGTGTTTACCACCGCACTGTTCTCACAGACTTCAGCCACTTGACGTGTCCTTCATGAAGCCTTTAAGTGTTCATTACACTGAAGAGCTTCGAAAGTGGCTACGTATGAATCCAGGGAAAGTCGTAACGTTGTTTCAAATTTCAACTCTTTTTGGATCAGCCTTTATTCAAAGCGCGACTATGAAGACAGCCATTAATGGATTTCAAGCTACAGGGATTTGGCCCACTGATCGATCTGTTTTCATTGAGTCTGATTTTCTCCCCGCGGACAGCGAGGACGATGAAGCTATACTTGTGTGTGAACTGTGTGAATCAGATTAA
- Protein Sequence
- MVRVYERKTNRQSWSIESMSNAVEAVISGQLGYVKASVQFNVPQTTLERYVKKKRENPEHCIDKTAGKFQAVFTQEQEHELVNYLKTMEARLFGLTMKDLLTLAYQLAVRNGIDHRFKNQMAGQDWANGFLKRNPSLSIRQPESTSGARAMGFNKVAVDNFFSLLTNLVDKYKLTASQIFNCDETGVSVNPKNNSKIIACKGKRQVGSLTSAERGETVTCLICMSPSGAYMPPMLIFPRKKMQKEFELGLPPGSWAEVHSTGWMTAELFLIWFKKFVAFSKASKEFPVLLILDGHTTHTKNLEVIDYARKNGVSLLCLPPHCSHRLQPLDVSFMKPLSVHYTEELRKWLRMNPGKVVTLFQISTLFGSAFIQSATMKTAINGFQATGIWPTDRSVFIESDFLPADSEDDEAILVCELCESD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00944038; iTF_00944339; iTF_00065558; iTF_00065674; iTF_00065904;
- 90% Identity
- iTF_00065558; iTF_00065904; iTF_00065674;
- 80% Identity
- -