Basic Information

Insect: Amphimallon solstitiale
Gene Symbol: JRK
Assembly: GCA_963170755.1
Location: OY720676.1:192990339-192992297[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 6.6e-11 3.5e-09 39.4 0.0 1 42 14 56 14 59 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	6.6e-11	3.5e-09	39.4	0.0	1	42	14	56	14	59	0.90

Sequence Information

Coding Sequence: ATGCGTATTTATCAACGAAAGTCCAATCGAGGAAATTGGGATCCTGAGTGCATGGAAAATGCTATTGAAGCAGTGTGTTCGGGCTCAATGGGATACCTTAAAGCTTCCAGGTCGTTTGGTGTTCCCCAGACAACTTTGGAGAGGAAAGTTAAAGAGAAGCGAACTACAAATGACCAGACCAAATTTCAAGTAGTAAAATCTCTGGGTCCTAGAACCACCACATTTACAGAAGATGAAGAAAAGCAGTTAGTGTCATATCTGAAAAAGATGGAAGAGAGGTTGTTTGGGTTAACAGTTATGGATTTCAGAACGTTGGCCTACCAGTGGGCTACAAAATTAGGGAAACAACATAGATTCTCCAAGGAGAAAGAGATGGCAGGAAGAGATTGGGTGCATCTGTTTTTAAAACGTCATTCAAGCCTGTCCATTAAAAGACCCGAAAACACTAGTGCTGCTAGAGCAATGGGCTTTAACCGCGTTGCAGTTAACCAATTCTTTGACCTACTAGTGGATGTCATTGACAAGTACAAGCTGACCGCAGAACAAATTTGGAATTGTGATGAGACCGGGGTATCCATTGTACCAAAAACAAGATccaaaataattgcacaaaaggGACGAAAACAAGTGGGAGCGCTGACGTCAGCCGAAAGAGGCGTTACTGTAACAGTCGAAATATGTTTTAATGGAGTTGGAAGATACCTGCCACCCATGTTTATATTTCCTAGGGTAAGATTAAATCCGGAATTAATGAATGACTGCCCTCCTGGTGCATGGGCTGAATGCCATCCAAGTGGTTGGATACAGACTGACATATTTTTTAATTGGTTTAAAAAGTTTGCTGAACTTTCCGGTGCGTGTAAAGAATCACCAGTACTTCTATTACTCGACGGACATCATTCGCACACAAAAAACATCGAACTAATTGCTTTTGCTCGAGATCAGGgaattattttactatgttttccCCCACACTGCACCCACCGTCTTCAACCACTGGATGTGTGCTTTATGAAACCGCTAAGTACTTATTACGAAGCAGAAGTAAACACATGGTTAAGAAGTAATCCTGGGCGAGTGGTTACCCAATTCCAAATAGCTAAATTGTTTGGAAATGCTTTCATTAAATCAGCGAACATGTTAACAGCGATGAACGGTTTCAAAAAGACTGGTATCTGGCCTTGTGACAGAAATGTGTTTACCGACGTTGACTTCGCCCCAGCAGAAACAACGAACCGTCCACCTCCTGAGGAAGCTGACGAGGAACCTattacaaataatacaaatatagacCCTGAATGTCTACCAGCTAACAACGAAACTATTACAAACAAAAAGACCTCAGACCCTAGAAATTTACCAGGTTGTTCAAAATGGATTAACAGAGAACGTCCAAGATCGTCCGTCGTTTCACCCCAACGGGATGAAGAACATATATCGCCCGAAGCAACACCAAAATCTTATCCAGAACATTCTACACCCGAAAAGATTTTTTCTCCTGAAGATATAATGCCAATACCAGTAGAGCTCAGCAAAAAAGAGCGTCCAAATCGAAAACGTGGCAAAAGTGTTATTTTAACGAGTACACCGTACAAAGATGAGCTTCAAGCAGATATCGATAAAAAACTTGAACAGGAGAAACGTAAAAGTCTTAAAACTgacaaaaaaggaaagaaaagtacTCAGACGAAGGAAAAAAAGCAAAAACAAAAGACGGTTAAAAGACAAGTGTTTGCACGGACTCAACaaaaaagattaagaaaagaatCATCACCGTCCAGTTCCTCAGAAGAGGATGAAGAAGATGATGCAGCGTGTCtgtattgtaattatttatattcagAATCTAACGAAGGGTGGGTGCAGTGCTGGCAGTGTAAGAAATGGGCGCACTGCTCATGCGCGGGGGAAGATGATGAAGACGACGAAGTAGTACATCTTTGTGCACTATGTCAATAg
Protein Sequence: MRIYQRKSNRGNWDPECMENAIEAVCSGSMGYLKASRSFGVPQTTLERKVKEKRTTNDQTKFQVVKSLGPRTTTFTEDEEKQLVSYLKKMEERLFGLTVMDFRTLAYQWATKLGKQHRFSKEKEMAGRDWVHLFLKRHSSLSIKRPENTSAARAMGFNRVAVNQFFDLLVDVIDKYKLTAEQIWNCDETGVSIVPKTRSKIIAQKGRKQVGALTSAERGVTVTVEICFNGVGRYLPPMFIFPRVRLNPELMNDCPPGAWAECHPSGWIQTDIFFNWFKKFAELSGACKESPVLLLLDGHHSHTKNIELIAFARDQGIILLCFPPHCTHRLQPLDVCFMKPLSTYYEAEVNTWLRSNPGRVVTQFQIAKLFGNAFIKSANMLTAMNGFKKTGIWPCDRNVFTDVDFAPAETTNRPPPEEADEEPITNNTNIDPECLPANNETITNKKTSDPRNLPGCSKWINRERPRSSVVSPQRDEEHISPEATPKSYPEHSTPEKIFSPEDIMPIPVELSKKERPNRKRGKSVILTSTPYKDELQADIDKKLEQEKRKSLKTDKKGKKSTQTKEKKQKQKTVKRQVFARTQQKRLRKESSPSSSSEEDEEDDAACLYCNYLYSESNEGWVQCWQCKKWAHCSCAGEDDEDDEVVHLCALCQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00065487;
90% Identity: iTF_00065500;
80% Identity: -