Asol019802.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720675.1:180222734-180224514[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.8e-11 3.7e-09 39.3 0.0 1 38 18 55 18 61 0.88
Sequence Information
- Coding Sequence
- ATGCCTCGAAGGTATCGCAGACAGTTGGGTTGTCGCTGGTACCGGGATTATACAGAAGAAACCTTAGAAACGGCCTTAGAAGCGTATGCTAATGGCAGACTTTCCCTTAGACGGGCCCAAGAGCGATATGGGATTCCCCGCGCCACCCTATGCCGAAAATATCTTGGGAAAAACCCAAAAAATCCAGGAAGGCAACCAGTTCTTGGCACAAATGAAGAAGCCAGCATTGTGAAAGCCATCACAGCTGCCGCTGAATGGGGCTACCCAATGACAAGAACCGAAATTCGGgaacttgtaaaaaaatatttggatcgGAAAGGCATTGTAGAAAGACGCTTCAATGAAAACTTACCAGGACAAGATTGGATGCGAAGTTTTCTAGCAAGGCATAACGAACTATCAAAACGACTCTCACAAAATATTAAGAGGTACAGAAGCGATGTGACAGAAGtagaaataaatgaatatttcgaCCATTTAGAGCAAAGCTTGGAAGGAATTAACCCCGacaatttgttaaattttgatgAAACCAATTTGACTGATGATCCAGGACAATCTATAGTTATTGTTAGACGAAATAAGAAAAGAGCCCTCAAAATAATGGATAATTCGAAATCGTCAACTTCAGTCATGTTTTGCGTAAGCGCTTCTGGCAGAACACTTCCTCCTTATATTGTATACAAAGCAAGAAATTTATATCCGGAGTGGATGGAAGGAGGTGAACTCGATTATGCGTATAACAGATCAAAAAGTGGATGGTTCGATTGTGAAATATTCGAAGATTGGTTTTTTAAAGTGGTCTGTCcatattttcgacatcgagagGGCAAGAAGGCTATAATCGGAGATAATCTTGCTTCACATCTGTCTGTTAAAATTATTGAAGCATGCGAACAACAGGGAATAACATTCATATTCCTACCGCCCAACAGCACACACGCTTGTCAGCCGTTAGACGTCGCGTATTTTGCACCATTGAAAAAGTTATGGAGAAAAATGCTCATGGAATGGAAACAAACCCACTGTGGCTGCCTTCCAAAATCAGAATTTCCAACTCTTCTGAAGAACACCTTATCACAGCTGGCAgcaaatcaaaatattaaatctggatttcgagCATCGGGGATATTCCCGCTCAATCGAGTGGAGGTCTTGAAAAACTTCCAGAAGCATGTTGTTCGACCGAAGGAGCCTGTGCGGAACAGAAAAAAGTTGAATGTCAAGCCCGGACAATCTGTCTCATTGAGAAGTTTGAGGCAAAGCGAGGAGGCGATCGATGTGATTGAATCGGAAAACGAATTGGATGACATTACAAACGAAGTCGATGAAGATGATGAGCCTCAACCTTCCTGCTCCAATCGCCCGTTAAACGAGGACAGCGAAGAATACGAAACCGATGAAGAATCTGAGATGGTGGTACAACATAAACTTACCAAAGAAAACTTAAAAGAAGAAGATTTTATTATTGCCGAATTCTGTTACAATCAAGGCAGCAAGAAAGAATGTTTGAAACAATTCGTTGCTCAAATCGTGGCTGTGAAAAAACGCAATTACACAATAAGATGCCTTAGACGCTACAAAGAGACTGAAAATATATTTGTGTTTCCACAAATTGAAGACGAAAATGAGATACAATTTGACCAAATTCGGGACCGTCTACCGAAGCCGACTGAGAAAAGAGGTCTTCGAATTTTTCCTGCCAATGTTGTGATAatctaa
- Protein Sequence
- MPRRYRRQLGCRWYRDYTEETLETALEAYANGRLSLRRAQERYGIPRATLCRKYLGKNPKNPGRQPVLGTNEEASIVKAITAAAEWGYPMTRTEIRELVKKYLDRKGIVERRFNENLPGQDWMRSFLARHNELSKRLSQNIKRYRSDVTEVEINEYFDHLEQSLEGINPDNLLNFDETNLTDDPGQSIVIVRRNKKRALKIMDNSKSSTSVMFCVSASGRTLPPYIVYKARNLYPEWMEGGELDYAYNRSKSGWFDCEIFEDWFFKVVCPYFRHREGKKAIIGDNLASHLSVKIIEACEQQGITFIFLPPNSTHACQPLDVAYFAPLKKLWRKMLMEWKQTHCGCLPKSEFPTLLKNTLSQLAANQNIKSGFRASGIFPLNRVEVLKNFQKHVVRPKEPVRNRKKLNVKPGQSVSLRSLRQSEEAIDVIESENELDDITNEVDEDDEPQPSCSNRPLNEDSEEYETDEESEMVVQHKLTKENLKEEDFIIAEFCYNQGSKKECLKQFVAQIVAVKKRNYTIRCLRRYKETENIFVFPQIEDENEIQFDQIRDRLPKPTEKRGLRIFPANVVII
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00065441; iTF_00065442; iTF_00065443; iTF_00065444; iTF_00065446; iTF_00065480; iTF_00065449; iTF_00065451; iTF_00065452; iTF_00065453; iTF_00065454; iTF_00065455; iTF_00065424; iTF_00065456; iTF_00065425; iTF_00065457; iTF_00065426; iTF_00065458; iTF_00065427; iTF_00065428; iTF_00065429; iTF_00065430; iTF_00065431; iTF_00065432; iTF_00065433; iTF_00065434; iTF_00065435; iTF_00065436; iTF_00065437; iTF_00065438; iTF_00065439; iTF_00065440; iTF_00065463; iTF_00065483;
- 90% Identity
- iTF_00065441; iTF_00065442; iTF_00065443; iTF_00065444; iTF_00065446; iTF_00065480; iTF_00065449; iTF_00065451; iTF_00065452; iTF_00065453; iTF_00065454; iTF_00065455; iTF_00065424; iTF_00065456; iTF_00065425; iTF_00065457; iTF_00065426; iTF_00065458; iTF_00065427; iTF_00065428; iTF_00065429; iTF_00065430; iTF_00065431; iTF_00065463; iTF_00065432; iTF_00065433; iTF_00065434; iTF_00065435; iTF_00065436; iTF_00065437; iTF_00065438; iTF_00065439; iTF_00065440;
- 80% Identity
- -