Asol060085.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Amphimallon solstitiale
Gene Symbol
RTase
Assembly
GCA_963170755.1
Location
OY720677.1:78434206-78440765[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.2e-11 3.3e-09 39.5 0.1 1 39 14 53 14 56 0.90

Sequence Information

Coding Sequence
ATGCGAGAGTATAAGCGAAAAACCAATCAACAAGGGTGGTCGGAAGAGAATATGAAATCTGCTATTGCAGCTGTAAGAATGGGAAATCTCAGCCAAAATAAAGCGGCAAAACAATTTGAAATACCAATTGCTACTTTATATAGACGCGTTAAGTCAGAAAAAGGCGTTGAAGAAGCCGCAAAGAAAAAATTAGGTCGATTCATAACTGTCTTTAATACTGACCAAGAAAGAACTCTAGTTAATTACCTCCTTGAAATGGACAAAAGATTTTTTGGCCTTTCTTATAAAGAACTTCGAACACTAGCTTACCAATATGCAGAAGTAAACAATATACCAAATAACTTTAATAAGGAACATAAGACAGCAGGAAGGGATTGGTTATATCTCTTTTTAAAGAGACATCCGGAACTGACATTAAGAACACCGGAAAATACGTCGGCTGCAAGAGCCGCTGGGTTTAATAAAGTTTCAGTAGAAATATTTTACAATCTTTTAGGTGAATTGTATGACAAATATTCTTTTCGCGCAAACAATATTTACAACTGTGACGAAACCGGCATCACAACTGTGCCAAATAAGCCAATTAAAGTGATATCATTAAAGGGTAAAAAGCAAGTCGGAAGTTTCAGCTCTTCAGAAAGAGGGCTACTAGTTACAGCTGAAATTTGCTTTAGCGCATCGGGACATTACATTCCTCCACTACTAATTATACCTAGAGTACGACGAAATCCAATTTACGAAGTCGGGCTGCCGCCAGAAACTGTTGTAGCTTTTCATAAATCAGGATGGATGCAATCTGATATCTTTTGTGATATTTGGTTTACTCACTTTTTAAAACACGCACGTCCTAATAGAGAAAATCCAATTCTTTTAATTCTAGATGGGCATGCAACTCATGTAAAAAATTTGAAGTTAATTGAGAGAGCTAgagaaaataatgtacatattctGTGTTTGCCACCGCATACATCTCATAAATTGCAACCACTTGACGTGTCCTTTATGTTTCCGTTGAGTAATTTTTATActcaagaattaaaaaattggcagcgaaataaacaaaataagatTATAGAGTTGTCGGACGTAGGGCAAATTTTTGGAAAAGCTTATTCTAGAGCTGCTACACTAGCTAATGCAGAAAATGGCTTCAGATCTACAGGAATTTACCCATATAACGCACATCTATTTACAGACATTGACTTTACTGCTGCAACTTTAACCGAGAGAGAAGATCCCAATCATGCTGAAACTTCACTACTCGACCAAAAAAACAATTCTGTAGATGCAGTGGTTTTTGTAAAAGAAACGAGTCCTTGTTGCACTACTGTCACATCACCTGAAGATATCATGCCAATACCGAAAGTTATACCAAAACAAATCACCAATAGATGCCGTCAACGTGGGAAAACAGCTGTTATTACTGCATCGCCATACATGAACGAACTTAAAGATAATCAAACTAAATTACCTGCAAAATCTATACAGCAAGTAAAACGAAAACTGTTATCTCAAGAAACAGCTCAATGTTCTAAAAAGTTTAAATGTAATGATAATTCTACTGACTCTGAAGATTATGAAACAGATCATCTGTGTGAAGATGATTCAAATTCTGATTACGCTGAAAGTAAGGAAATACCAGACATGCGTGATAAGCAGGagcaaatatttactttggtGCAGAGAGAGATTGTAAAAGACGATTTCATTCTTGTTTCTTTAAAAGAAGAGAAGAAACAAACTGAAAAAGAATTTGTAGCTAAAGTAATACGTGTTGTTGAAGAAATTGCTGCAAATCAAAACACCTCTTATGAGGTAAAGTTCATGAGGAATTACAGATCACATTATGATACATTTATATTTCCTGATGTTGATGATATcaAGACCTGGTTAACTTCAAACTCTGTGAGTTACATGCATATCCAGGATTTTGCTTTGAGGGCCAGCTATTCTCGTACTAATCGAAAGGGTGGGGGAGTTGCTATTTTGGCTAGGAAAGGAGTAGAGGTGACAGAGGTTAATACAAATGATTTTTCGGTGGAGGGTGTAACTGAGTTTTGCGGTGTGTATTGGAAGGTGAGGCTTTCCTCTATATTAGTTGTTCTATGTTATAGACCACCGAATAATTCTGTTGAGGATTTCTCTGTATTTTTTGAaagtattacaaatttattagacaacttaTTTATGGTTGATGTCCCAATTATTGTTCTCGGTGACTTTAATATAGATCCTGTCAGAGATCATACTCAATATCAGATATTGAGAAACATTTTGCAGACCTATAACCTATACAATATTGTAAGTACACCAACTCGTGGGAATTACATCCTTGATCATTTTTTCATCAATCATAATAGGGATCATGCAAAAATATTAGTTGTAGACAATCATATATCAGATCACAGAACAGTGCTAGTAAACGTTCCTCAACTATTTAGTGCTCCTAATGGGTGTCCCATagtttacaaaagaaaatttaacaaggaaaatgTGGATCGCTTTGCATCTGACTTGATGTGTGAAGACTGGAGCGGAGTGTATGATCATTCCAATTTTCAAGAATGTTTTGATAGATTCattagaatttttctgtattattttaatcTGCACTTCCCAATACAAAGATCGCGGGCCGTACACGCAAATAAACGCTGGGTCAATAGTGAAGTGATTACATCATCAAGCGAACTAAAGTCTTTATATTACCTTCGGTTAAAATATCCGGTTCTAGATGATTACTATAAAAAAGCTAAGATTGAACACCAATATTTAGTAGATCATACAAAGCGGACATATTATCAGAACAAAATATTTAGCTCAGAAAACCCACACAAAACAGCCTGGTCTGTTATTAAAGAATTATCAAATGCTGTACCAGATGGATCCaactatgaaataaaaataaacaacaaattacttttcAACCCCAACATAATAGCTCAGCATTTCAATGAATTCTTCTTATGTGCCCCATTAAATAATATCTTATTCCAGTCAACGAGCAACACTACTAACAATAATTCTACTCCCCAAAGAGTAAACAAAACCATTTTCTTAGAGCCAATATCATTCTACGAACTTTCCTatatcatattaaataaattaaaaaattcacaTTCATCTGGTCCGGACGAAATTCCATCATTTGTAATCAGGGCGATTTATACCTCTATTATACCTGTTCTATCATACCTCATTAATATGTCTCTCCAGCAAGGGAAATTCCCACATATTCTGAAAACTACTAAAGTAGTTCCTATACATAAGGGTGGAGACAAATCATCTATGGGAAACTACAGGCCGATTGCACTTACAtcctgtttttcaaaaatatttgaatattactTCTTAGATAGATTAAATAACTTTTTGGTAAAAAATAATATACTGAGCAATTACCAACATGGTTTCAGGAAAGGCCGGTCAACTACTACTGCCCTTAatgctttctataattttattgtcaCTGCCATTGATGATGGTACTTACCCTGTTGCAATGTTTCTTGATTTAAGTAAGGCTTTCGACTGTGTGGACCACAGTCTTTTGATAAACAAGTTAGAGATCTTGGGGATCAGAGGTGTTGCTCTTGATTGGATAAAATCTTTCCTCATGGGTAGGAGGCAATATGTTAATATTACCTATCGCAGTTCAAACAGAATTAGTAGCCATAACTCTGAGATGATGACGAGTGGCAGAGGTGTGCCCCAGGGTTCAGTGCTGGGACCAGTGCTATTTCTGCTCTTTATTAATGACCTACCGCAAATTGTTTCAGACACCTTCATCacaatttatgctgacgatattgcGCTGGTTACTGCTGCTTCAGATGACCAAATTCTTACTAAAAAATGCAACAGGATATTGAACACTGTTTCTGAATGGTTTATGGAAAACAAGCTCATTCTTAACAATTCCAAAACCACCTATATAAGATTCCATCCTTATCAATTTCAGGCGGATAAGGAGTTTTATTTGAACCTCAATCTTAACGGTAATAGGATGGGGAGAAGTGAAAATTACAAGTTTTTGGGGGTGTGGATGGATGAATTGTTAAGTTGGAAACATCACTGTGAGACACTATTAGTAAAACTGAACTCATTTTGTTTCTTGTTCAGATCCTTACGGGCGGTTTTGACTGAGCAGCAGCTGATGAGCTTGTATCATGCATACATTGCAAGCAGATTGAGGTATGGTATTGGGTTTTGGGGTACTTCGGCATTGGCtgctgatatttttatatgtcaaaagaagattgtgCGAATTATAGCTGGTGTCGGCCCCTCTCGCTCTGCCAAACCCTCTTTTATTGACCTGAACATCTTGACTCTGCCATGTATATTAATAGAAGACCTGGCAAACCACGTACATAATAATAAACTTGATTATACATTAAATCGTGATTTGCATGGTCTCAGTACGAGATCTGGGGATAATTTCGTAATACCTAAATCAAGACTAAAATTACATCAGTACTCTCCCCAGGTACTCGCATTAAGAGTATATAATAAGTTACCATCAGTTATTAGGCATCTACGACCCAAACAGTTTAAGAACCGATTGCATCAGGTTTTGTCGGTGAAAGCTTATTACTCCCTACAGGAGTTTTTGGATTGTAATTTTAGAGTATAA
Protein Sequence
MREYKRKTNQQGWSEENMKSAIAAVRMGNLSQNKAAKQFEIPIATLYRRVKSEKGVEEAAKKKLGRFITVFNTDQERTLVNYLLEMDKRFFGLSYKELRTLAYQYAEVNNIPNNFNKEHKTAGRDWLYLFLKRHPELTLRTPENTSAARAAGFNKVSVEIFYNLLGELYDKYSFRANNIYNCDETGITTVPNKPIKVISLKGKKQVGSFSSSERGLLVTAEICFSASGHYIPPLLIIPRVRRNPIYEVGLPPETVVAFHKSGWMQSDIFCDIWFTHFLKHARPNRENPILLILDGHATHVKNLKLIERARENNVHILCLPPHTSHKLQPLDVSFMFPLSNFYTQELKNWQRNKQNKIIELSDVGQIFGKAYSRAATLANAENGFRSTGIYPYNAHLFTDIDFTAATLTEREDPNHAETSLLDQKNNSVDAVVFVKETSPCCTTVTSPEDIMPIPKVIPKQITNRCRQRGKTAVITASPYMNELKDNQTKLPAKSIQQVKRKLLSQETAQCSKKFKCNDNSTDSEDYETDHLCEDDSNSDYAESKEIPDMRDKQEQIFTLVQREIVKDDFILVSLKEEKKQTEKEFVAKVIRVVEEIAANQNTSYEVKFMRNYRSHYDTFIFPDVDDIKTWLTSNSVSYMHIQDFALRASYSRTNRKGGGVAILARKGVEVTEVNTNDFSVEGVTEFCGVYWKVRLSSILVVLCYRPPNNSVEDFSVFFESITNLLDNLFMVDVPIIVLGDFNIDPVRDHTQYQILRNILQTYNLYNIVSTPTRGNYILDHFFINHNRDHAKILVVDNHISDHRTVLVNVPQLFSAPNGCPIVYKRKFNKENVDRFASDLMCEDWSGVYDHSNFQECFDRFIRIFLYYFNLHFPIQRSRAVHANKRWVNSEVITSSSELKSLYYLRLKYPVLDDYYKKAKIEHQYLVDHTKRTYYQNKIFSSENPHKTAWSVIKELSNAVPDGSNYEIKINNKLLFNPNIIAQHFNEFFLCAPLNNILFQSTSNTTNNNSTPQRVNKTIFLEPISFYELSYIILNKLKNSHSSGPDEIPSFVIRAIYTSIIPVLSYLINMSLQQGKFPHILKTTKVVPIHKGGDKSSMGNYRPIALTSCFSKIFEYYFLDRLNNFLVKNNILSNYQHGFRKGRSTTTALNAFYNFIVTAIDDGTYPVAMFLDLSKAFDCVDHSLLINKLEILGIRGVALDWIKSFLMGRRQYVNITYRSSNRISSHNSEMMTSGRGVPQGSVLGPVLFLLFINDLPQIVSDTFITIYADDIALVTAASDDQILTKKCNRILNTVSEWFMENKLILNNSKTTYIRFHPYQFQADKEFYLNLNLNGNRMGRSENYKFLGVWMDELLSWKHHCETLLVKLNSFCFLFRSLRAVLTEQQLMSLYHAYIASRLRYGIGFWGTSALAADIFICQKKIVRIIAGVGPSRSAKPSFIDLNILTLPCILIEDLANHVHNNKLDYTLNRDLHGLSTRSGDNFVIPKSRLKLHQYSPQVLALRVYNKLPSVIRHLRPKQFKNRLHQVLSVKAYYSLQEFLDCNFRV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-