Asol046939.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720677.1:12348804-12352485[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.5e-11 2.4e-09 39.9 0.0 3 41 40 78 39 81 0.94
Sequence Information
- Coding Sequence
- ATGGAAAACAAAAATACTAATAAAGGCAGCAAGAAATCTCAAAAGTGTCAGTTAtgcgaaaaatgttttaaaaaacctAGTGAATTAAAGTATCACATTGGTAGAAAACATCCAAAAGAGGCTTTATCTGAAGCGTTAAGGCAAATAAGAGAAAATAATTTGAGCGTACGGAAAGCAAGTAAGATTTATGGAGTACCAAAAACCACAATCCATGATAGACTAAGTGGAAAGATTGCCGAAAATCCCAGAAGAATGGGTCCAACACCAGTTTTGAGCACCGCTGAAGAAAAAGCTTTGGTTGAATGGTGTATAAATTTAGCCAAGTGTGGTTTCCCACGAAAAATGGATGATATACTCAATACAGTTCAAAAAATCATACTTTCAAAAAGTGAAGAAGATAGAGAAAAGGTACCATTTGTAAACGGACGTCCTGGAAAAAAGTGGTATTCTGCATTCTTCAGGCGTAATCCACAGCTGGTCCATAGGAGTCCAGAAAATTTATCCAAAGGGCGTGCAGTTGTTACAGAGGAAAGCATAAGGAAATGGTTTACTTGTTTACGAGAATATTTGGAAACCGAAAATGCAGTAGATATTTTGGACGATGCCACTAGAATCTTCAACGGGGACGAAACTAGTTTCACTCTATGTCCCAAAACGGGAAAAATAATAGCCCCTAGAGGATACAGAAATGTTTATCAAATCGTTAAAGGTAAAGAAAAAGAAGCTTTGACGGTTTTGATAGTAATTTCAGCAGACGGTGTCATAGCACATCCGTGTGTGGTGTTTCCATATGTCAGACCTCCAAAAGATGTGCGTGAAAGCATGGACCCTTCGTGGTGTTTAGGTTTAAGCGAAACGGGTTGGATGAGATCAGAAGTTTTTTACGAGTATGTCGCCAATTCTTTCAACACGTGGTTGGAAACCAATGGAATCAAAAAGCCTATTCTTTTCATTATAGATGGTCACAAAAGCCACTTAACCATGAGCTTAAGTGAGTTCTGTTCCAACAATGGTATCATTTTGTATGCCCTACCACCTAATGCCACCCACATACTCCAGCCTTGCGACGTAAGTGTTTTTAAACCACTTAAATCACAATGGCAAGCTACAGTAAGAGAATGGCAAATGTGCGAAGAGAACACAAACCAAATTTTAACCAAAGCAAAGTTCTGCCCACTTCTTAAAAGGGTCCTGAAGAAAGAAAATTTACCCCAAACTATAAAAAATGGTTTCCGTAGATGCGGACTTTTTCCATTTAATCCAAATGCTGTGGATTACACTAAATGTGTTCAGAATGTGTTGGAAAATTTAGAGGAGACTAACACGTCGCTTCAAGTTATAACTGACCCAAACACTCCATCAATCGCCAATTATGAGACTACGGAACAAACAATTAAGTACCTTCAGGGTACTTTGGAAGAACGCGGAGTTAATGTACACTTAATTCTTGAGGAGTTATCAAAATCGAAACATTCTCTTAttggcaacattgaacaaaaAGATAATCCTCCTGCACCAATACCGGAGACAACAGTAAACAATCTTCCatttgaaacaataaataatgATCTTCCACCAGTAACACCAATACCGGAGACAACAGTAAATAATCTTCCATTTGAAACAGTAAATAATGATCTTCCAACAGCAACACCAATACCGGAGACAACAGTAAATAATCTTCTATTTGAAACAGTAAATAATGATCTTCCACCCGTAACCATAGATGATATTCCATCCGTATCCCTATTTTCTAATGGTCAAATATATGATATCGACGAAGCTGGATATCTTATTCCTCCACCAGAAGAAATACAAGGGACTGAAAATGTTTTACTACCCAATAACGACTCCCAAGACTCATCCAGTGAAATAAAAAATTCAAGTATCGTAATTATCCCAGCAAAAAGTTCCGATATCTCTAATCAGGTATTGTTTTATCCAAAGCCGATTATGAAAAGCAAGATGAACAAAAATGCACCCAAATTGCCAAGTGCAATATCATCTGAAATGTGGAGGCAACTCGAAAAAGAGAAGGAAGATGCTAAACAAAGAAAAATTGATGCCGTTCGGGCAAGAAAAGAAGAAGCGCAGAAAAAAAAGGAAGCGAAGCAACTTGAAATGCGAAAACGGatggaaaaaagaaaaagaaaacgatGTGTGAGACAAGAAAATGAGAATATACCAAATAATGAACAATTACCAGAACAAAATAATGGTTTAGAGAGTAATAAGACTGACAAAAGAAGAGAATTTATCAAGTGTACTTCATGCGACATCGAATTAATCAGTGATACAGAAGACAATGATCTCAAAAATATTGGTTGTGATGAGTGCACAAGCTGGTACCATTTGAAATGTACAACGTTCAAAGGACATTTATACGAGGAAATTGCTGCCAAAGACTTTATCTGTCCGCAATGTACGCAATGA
- Protein Sequence
- MENKNTNKGSKKSQKCQLCEKCFKKPSELKYHIGRKHPKEALSEALRQIRENNLSVRKASKIYGVPKTTIHDRLSGKIAENPRRMGPTPVLSTAEEKALVEWCINLAKCGFPRKMDDILNTVQKIILSKSEEDREKVPFVNGRPGKKWYSAFFRRNPQLVHRSPENLSKGRAVVTEESIRKWFTCLREYLETENAVDILDDATRIFNGDETSFTLCPKTGKIIAPRGYRNVYQIVKGKEKEALTVLIVISADGVIAHPCVVFPYVRPPKDVRESMDPSWCLGLSETGWMRSEVFYEYVANSFNTWLETNGIKKPILFIIDGHKSHLTMSLSEFCSNNGIILYALPPNATHILQPCDVSVFKPLKSQWQATVREWQMCEENTNQILTKAKFCPLLKRVLKKENLPQTIKNGFRRCGLFPFNPNAVDYTKCVQNVLENLEETNTSLQVITDPNTPSIANYETTEQTIKYLQGTLEERGVNVHLILEELSKSKHSLIGNIEQKDNPPAPIPETTVNNLPFETINNDLPPVTPIPETTVNNLPFETVNNDLPTATPIPETTVNNLLFETVNNDLPPVTIDDIPSVSLFSNGQIYDIDEAGYLIPPPEEIQGTENVLLPNNDSQDSSSEIKNSSIVIIPAKSSDISNQVLFYPKPIMKSKMNKNAPKLPSAISSEMWRQLEKEKEDAKQRKIDAVRARKEEAQKKKEAKQLEMRKRMEKRKRKRCVRQENENIPNNEQLPEQNNGLESNKTDKRREFIKCTSCDIELISDTEDNDLKNIGCDECTSWYHLKCTTFKGHLYEEIAAKDFICPQCTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00065537; iTF_00065250; iTF_00065251; iTF_00065252; iTF_00065253; iTF_00065254; iTF_00065255; iTF_00065256; iTF_00065325; iTF_00065239; iTF_00065241; iTF_00065242; iTF_00065626; iTF_00065240; iTF_00065276;
- 90% Identity
- iTF_00065537;
- 80% Identity
- -