Asol144038.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720683.1:81310126-81311952[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-11 1.4e-09 40.7 0.0 2 39 20 57 19 64 0.87
Sequence Information
- Coding Sequence
- ATGCCGACTGAgtataaaagaaagaataatactgCTGGTGCGAGAGGATGCTGGACTGCAGATCAACTTTTGCAAGCTGTCGAAGCAGTAAGAAATGGTACTATGGGCGTAAACGCTGCCTCTAGAAACTTTGGCATACCAGCTCCGACGCTGAGGAGACGAATGAAAAATAATGATTTAACTAAGAAGACGCTAGGACCGCCTTCATTGCTTGGTATAGAAAATGAGGAAAAGCTTATatctcatataaaaaaattgcaaaaacacGGTTTTGCACCAACGAGAGAGGGTGTAAGATCTATGGCGTTCCATTTAGCCCAACATTTGTGTGTCAAGCACAAATTTAATTCAGAGAAGGAAGTGGCCGGGTACGATTGGTTGAACATGTTTCTAAAACGTCACCCAGATCTTAGTGTAAGAAAATCCGAAGGTGTTTCATTAGCTCGCAGTCAAGGAATGAACAAAAAAGAAGTTACGTCGTATTTCCAGCTGTTGGAAGAAGTTTTAATTGCAAACGATCTTGTGAACAAGCCAGCTAACATATTTAATATGGACGAAACAGGCCTGCAATTAAATAATAAGCCCGGGTATGTTATTGCACAAAGAGGATCAAAAAATGTCGCTGCGGTTACGTCATCTGAAAAGGGCGAAACCATCACTGTAATTTCTGCTTGTAATGCTGAAGGCTCATTCTTACCGCctgtatgtatttttaaaggCAAAAACAAAAAGCTTGAATTCGAGGATGGCATGCCTCCAGGTTCGGTAGTATATATGAATGAAAAGTCTGCTTACATTAGCACTACATTGTTTTTCAAATGGTTGAAGACTCATTTCACACCCAGAAAGCCAGATGGTAAAgtagttttaattttggatggtCACTCAACCCACTGTAACTCCGTCGAAATGTTAGAATATGCTGAGGAGCAAGGAATAATCTTGCTGTGCCTTCCTAGCCATACCACCCAGTTTCTTCAACCTCTAGACAGATCAGTCTTCAAAAGTTTAAAATCTCATTATGCAAAGGCTTGCAACTTATTTGTCAAGACAAATCCAACAAGAAAAATTAATCGGTTAGTATTTGGTCAGTTACTAAGAGATGCTTGGTCTAAAGCTGCCACTGTGGAGAATGGAGCATCGGGTTTCAGGGCAACTGGCATCTACCCGTACAACCCAAATATGATTCCAGACTACGCTTTCCTAAATGAAGAACACCCACCAGAACAACATATTGTTGATGCTAcggaagatataaataataataaagaaccaGAACCTAACTTACCTGGTTGTTCACAAACAAACAACGAAACGACTCCATTAAAAGACACACCAGGCACAATGTTGAACAAATTTAATCCAATACCTAGCATATCAACACATGATGTGGTTCTGCAAACACGAAAACGAGGAAAACAAGTTGCTGCAATTTTGACATCATACCAAAACATAGAACAAAGAAAAAGCAGCGAAGCAAAGaaaatagaattagaaaaatctCGAGCAGCAAAACGTGCAAAAAGAAGTATTAAGTCCAAGTCGAAACAAATTCTGGATGATTCATCTTCAAATGACCACTTGTCTGATTTTTCTACTCGAGAGTCTGATGACAGTCCAGAGGAAGACGACACTAATGCTGAATGTGTAGGATGCGGTGAGCTATATAGCTGCACATCGAAACAAGATGATTGGATTCAATGTGTAAAATGTTATCAATGGTTTCACGAACGATGTTCAAAATGTTTGAACTTATGTGACCTTTGTCACCCTGAATCATGGGTCATCTCACCCGGACAGTCCGGGTTAGATGGCTCTTATAcatga
- Protein Sequence
- MPTEYKRKNNTAGARGCWTADQLLQAVEAVRNGTMGVNAASRNFGIPAPTLRRRMKNNDLTKKTLGPPSLLGIENEEKLISHIKKLQKHGFAPTREGVRSMAFHLAQHLCVKHKFNSEKEVAGYDWLNMFLKRHPDLSVRKSEGVSLARSQGMNKKEVTSYFQLLEEVLIANDLVNKPANIFNMDETGLQLNNKPGYVIAQRGSKNVAAVTSSEKGETITVISACNAEGSFLPPVCIFKGKNKKLEFEDGMPPGSVVYMNEKSAYISTTLFFKWLKTHFTPRKPDGKVVLILDGHSTHCNSVEMLEYAEEQGIILLCLPSHTTQFLQPLDRSVFKSLKSHYAKACNLFVKTNPTRKINRLVFGQLLRDAWSKAATVENGASGFRATGIYPYNPNMIPDYAFLNEEHPPEQHIVDATEDINNNKEPEPNLPGCSQTNNETTPLKDTPGTMLNKFNPIPSISTHDVVLQTRKRGKQVAAILTSYQNIEQRKSSEAKKIELEKSRAAKRAKRSIKSKSKQILDDSSSNDHLSDFSTRESDDSPEEDDTNAECVGCGELYSCTSKQDDWIQCVKCYQWFHERCSKCLNLCDLCHPESWVISPGQSGLDGSYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00065354; iTF_00065363; iTF_00065364; iTF_00065366; iTF_00066583; iTF_00065465; iTF_00067033; iTF_00065795; iTF_00065423; iTF_00066240; iTF_00065362; iTF_00065461; iTF_00065208; iTF_00065400; iTF_00065418;
- 90% Identity
- iTF_00065400;
- 80% Identity
- -