Asol068256.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- cheC
- Assembly
- GCA_963170755.1
- Location
- OY720677.1:135771093-135773003[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-11 8.9e-10 41.3 0.1 1 40 14 54 14 58 0.91
Sequence Information
- Coding Sequence
- ATGCGAGAGTATAAGCGAAAAACCAATCAACAAGGGTGGTCGGAAGAGAATATGAAATCTGCTATTGCAGCTGTAAGAATGGGAAATCTCAGCCAAAATAAAGCGGCAAAACAATTTGAAATACCAATTGCTACTTTATATAGACGCGTTAAGTCAGAAAAAGGCGATGAAGAAGCCGCAAAGAAAAAATTAGGTCGATTCATAACTGTCTTTAATACTGACCAAGAAAGAACTCTAGTTGATTACCTCCTTGAAATGGACAAAAGATTTTTTGGCCTTTCTTATAAAGAACTTCGAACACTAGCTTACCAATATGCAGAAGTAAACAATATACCAAATAACTTTAATAAGGAACATAAGACATTAAGAACACCGGAAAATACGTCGGCTGCAAGAGCCGCTGGGTTTAATAAAGTTTCAGTAGAAATATATTACAATCTTTTAGGTGAATTGTATGACAAATATTCTTTTCGCGCAAACAATATTTACAACTGTGACGAAACCGGCATCACAACTGTGCCAAATAAGCCAATTAAAGTGATATCATTAAAGGGTAAAAAGCAAGTCGGAAGTTTCAGCTCTTCAGAAAGAGGGCTACTAGTTACAGCTGAAATTTGCTTTAGTGCATCGGGACATTACATTCCTCCACTACTAATTATACCTAGAGTACGACGAAATCCAATTTACGAAGTCGGGCTGCCGCCAGAAACTGTTGTAGCTTTTCATAAATCAGGATGGATGCAATCTGATATCTTTTGTGATATTTGGTTTACTCACTTTTTAAAACACGCACGTCCTAATAAAGAAAATCCAATTCTTTTAATTCTAGATGGGCATGCAACTCATGTAAAAAATTTGAAGTTAATTGAGAGAGCTAgagaaaataatgtacatattctGTGTTTGCCACCGCATACATCTCATAAATTGCAACCACTTGACATGTCCTTTATGTTTCCGTTGAGTAATTTTTATActcaagaattaaaaaattggcagcgaaataaacaaaataagatTATAGAGTTGTCGGACGTAGGGCAAATTTTTGGAAAAGCTTATTCTAGAGCTGCTACACTAGCTAATGCAGAAAATGGCTTCAGATCTACAGGAATTTACCCATATAACGCACATCTATTTACAGACATTGACTTTACTGCTGCAACTTTAACCGAGAGAGAAGATCCCAATCATGCTGAAACTTCACTACTCGACCAAAAAAACAATTCTGTAGATGCAGTGGTTTTTGTAAAAGAAACGAGTCCTTGTTGCACTACTGTCACATCACCTGAAGATATCATGCCAATACCGAAAGTTATACCAAAACAAATCACCAATAGATGCCGTCAACGTGGGAAAACAGCTGTTATTACTGCATCCCCATACATGAACGAACTTAAAGATAATCAAACTAAATTACCTGCAAAATCTATACAGCAAGTAAAACGAAAACTGTTATCTCAAGAAACAGCTCAATGTTCTAAAAAGTTTAAATGTAATGATAATTCTACTGACTCTGAAGATTATGAAACAGATCATCTGTGTGAAGAGGATTCAAATTCTGATTACGCTGAAAGTAAGGAAATACCAGACATGCGTGATAAGCAGGagcaaatatttactttggtGCAGAGAGAGATTGTAAAAGACGATTTCATTCTTGTTTCTTTAAAAGAAGAGAAGAAACAAACTGAAAAAGAATTTGTAGCTAAAGTAATACGTGTTGTTGAAGAAATTGCTGCAAATCAAAACACCTCTTATGAGGTAAAGTTCATGAGGAATTACAGATCACATTATGATACATTTATATTTCCTGATGTTGATGACATcagtattatatataataatgaaataaagggTGTGCTAACACATTTTTCAAGCATACGTTATGGAAAAATTGTATTTAAGTAA
- Protein Sequence
- MREYKRKTNQQGWSEENMKSAIAAVRMGNLSQNKAAKQFEIPIATLYRRVKSEKGDEEAAKKKLGRFITVFNTDQERTLVDYLLEMDKRFFGLSYKELRTLAYQYAEVNNIPNNFNKEHKTLRTPENTSAARAAGFNKVSVEIYYNLLGELYDKYSFRANNIYNCDETGITTVPNKPIKVISLKGKKQVGSFSSSERGLLVTAEICFSASGHYIPPLLIIPRVRRNPIYEVGLPPETVVAFHKSGWMQSDIFCDIWFTHFLKHARPNKENPILLILDGHATHVKNLKLIERARENNVHILCLPPHTSHKLQPLDMSFMFPLSNFYTQELKNWQRNKQNKIIELSDVGQIFGKAYSRAATLANAENGFRSTGIYPYNAHLFTDIDFTAATLTEREDPNHAETSLLDQKNNSVDAVVFVKETSPCCTTVTSPEDIMPIPKVIPKQITNRCRQRGKTAVITASPYMNELKDNQTKLPAKSIQQVKRKLLSQETAQCSKKFKCNDNSTDSEDYETDHLCEEDSNSDYAESKEIPDMRDKQEQIFTLVQREIVKDDFILVSLKEEKKQTEKEFVAKVIRVVEEIAANQNTSYEVKFMRNYRSHYDTFIFPDVDDISIIYNNEIKGVLTHFSSIRYGKIVFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00065352; iTF_00065353; iTF_00065370; iTF_00065323; iTF_00065503; iTF_00065395; iTF_00065334; iTF_00065335; iTF_00065336; iTF_00065337; iTF_00066045; iTF_00065930; iTF_00065324; iTF_00066139;
- 90% Identity
- iTF_00065352;
- 80% Identity
- -