Asol071549.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720678.1:1610946-1614724[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.0088 0.47 13.4 0.0 8 37 15 44 11 48 0.85 2 3 0.0095 0.51 13.3 0.0 8 37 85 114 79 118 0.85 3 3 0.0095 0.51 13.3 0.0 8 37 155 184 149 188 0.85
Sequence Information
- Coding Sequence
- atgCCTAAAAAAGCTGATTACGAGCGAAATTTAATAGACATCGCAGTTCAAGAAGTTAAAACCGGCAGTTCCTGCCGAAGCGTGTCTATTAAATACGGAATACCAAAATCCACGATtgagtttaaattaaaaaatcctGGACACCGAGAAAGTTGTGGTCCTCCTCCAGTTTTGACTACTGAAGAAGAAAACTCTTTAGCAACtgtaaaatgCCTAAAAAAAGCTGATTACGAGCCAAATTTAATAGACATCGCAGTTCAAGAAGTTAAAACCGGCAGTTCCTACCGAAGCGTGTCTATTAAATACGGAATACCAAAATCCACGATtgagtttaaattaaaaaatcctGGACACCGAGAAAGTTATGGTCCTCCTCCAGTTTTGACTACTGAAGAAGAAAACTCTTTAGCAACTGTAAAATGCCTAAAAAAAGCTGATTACCAGCCAAATTTAATAGACATCGCAGTTCAAGAAGTTAAAACCGGCAGTTCCTACCGAAGCGTGTCTATTAAATACGGAATACCAAAATCCACGATtgagtttaaattaaaaaatcctGGACACCGAGAAAGTTATGGTCCTCCTCCAGTTTTGACTACTGAAGAAGAAAACTCTTTAGCAACATGGATATTAGATTCTGCAAAAAAAGGTTTTCCTAGgaaaaaatatgatatattaagCAGTGTTCAAAAATTTCTTATTGACAATCCAAGGCAGAACCCTTTTAAAGATAATCGTCCTGGAGATGGTTGGTTAAAGGTAAGTGTGGTGCCTGTTACGTCCCTGGcagaaAGAACCAGTGAAGCAGTGTCGTATGCAAGTGCTTGCGTCACAGAAAAGGATATTCGAAAATGGTTTCTAGAAGTAGAAACTTACATCAATGAAACAAATTTGCGCGATGTTATAACGGACCCACCGAGGGTTTACAACTGCGATGAGACTGGGTTTCAAATATGTCCTAAAACTGGCATAGTTTATGCCGCCAAAGGGGCAAAAAACTTTAATACCGTTGAGAAAGGTGCTTCAAAGGAATGCATCACAGTTATGTTTACTTTTTCGTCAAGTGGAACAAATTGTTGCCCTATGGTTATTTACTCTTACAAGAGGATCCCAGAGAAAATTGCGACAACTATCAATCCTAAATGA
- Protein Sequence
- MPKKADYERNLIDIAVQEVKTGSSCRSVSIKYGIPKSTIEFKLKNPGHRESCGPPPVLTTEEENSLATVKCLKKADYEPNLIDIAVQEVKTGSSYRSVSIKYGIPKSTIEFKLKNPGHRESYGPPPVLTTEEENSLATVKCLKKADYQPNLIDIAVQEVKTGSSYRSVSIKYGIPKSTIEFKLKNPGHRESYGPPPVLTTEEENSLATWILDSAKKGFPRKKYDILSSVQKFLIDNPRQNPFKDNRPGDGWLKVSVVPVTSLAERTSEAVSYASACVTEKDIRKWFLEVETYINETNLRDVITDPPRVYNCDETGFQICPKTGIVYAAKGAKNFNTVEKGASKECITVMFTFSSSGTNCCPMVIYSYKRIPEKIATTINPK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -