Asol032463.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720676.1:51804457-51804804[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-10 1.1e-08 37.8 0.0 3 39 21 57 19 64 0.85 2 2 6.3 3.4e+02 4.3 0.0 23 31 98 106 95 107 0.88
Sequence Information
- Coding Sequence
- ATGCCGACAGAgtataaaagaaagaataatactgCTGGTGCGAGAGGATGCTGGACTGCAGATCAACTTTTGCAAACTGTCGAAGCAGTAAGAAATGGTACTATGGGCGTAAACGCTGCCTCTAGAAACTTTGGCATACCAACTCCGACGCTGAGGAGACGAATGAAAAATAATGATTTAACTAAGAAGACGCTAGGACCGCCTTCATTGCTTGGTATAGAAAATGAGGAAAAGCTTAAATCTCATAcaaaaaaaatggcaaaaacacGGTTTTGCACCAACGAGAGAGGGTGTAAGATCTATGGCGTTCCATTTAGCCCAACATTTGGGTGTCAAGCACAAATTTAA
- Protein Sequence
- MPTEYKRKNNTAGARGCWTADQLLQTVEAVRNGTMGVNAASRNFGIPTPTLRRRMKNNDLTKKTLGPPSLLGIENEEKLKSHTKKMAKTRFCTNERGCKIYGVPFSPTFGCQAQI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00065192;
- 90% Identity
- iTF_00065110;
- 80% Identity
- -