Basic Information

Insect: Amphimallon solstitiale
Gene Symbol: -
Assembly: GCA_963170755.1
Location: OY720678.1:145582571-145584067[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 7.7e-13 4.2e-11 45.6 0.0 4 45 20 61 17 61 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	7.7e-13	4.2e-11	45.6	0.0	4	45	20	61	17	61	0.94

Sequence Information

Coding Sequence: AtgccaaatatttacacaaggaAAGGTAATGTACACCGAGGAAACTGGACGTCCAGAGCACTTCAAGATGCCTTAACTGCAGTAGCAAATGGAGCAATGGGGTTGAACGAAGCTGCTAGAAATTTTGGAATACCAGCAACCACATTGAAACGTAGAAAACGAAATGGTAATCCTACGAAACAAAATCGTCTCGGTCCGCCATCGTCTTTGGGCGAGGATGCAGAAATCAAATTAGTGCGACATATCAAAAAGCTTCAAAAATTTGGTTTTGCTCCTACCAGGGATGTACTCCGTAGAATGGCGTATGACTTGGCTGAAAAGATGAATATTAAACACAAGTTTAACAGAGCCACTGGTAAAGCAGGGTTCGTTTGGCTTCAGTTGTTTTTAAGGCGCCATCCGGATCTATCGGTGCGAAAGTCGGAGGGAGTATCCCTTCTTCGCTCACAGGGAATGTCAAGAAAAGCTGTATCAGATTATTTTAAACTTCTAGAAAACACTCTTATAGAAAACGACTTATTGGAAAAATCCGGAAATATTTACAACATGGATGAAACCGGCCTTCAACTCAATAATAAGGCCGGACATGTGGTCGCTGCAAAAGGCTCTAAAACCATCTCTGCTATAACTTCTGGCGAAAAAGGAGAAACAATCAGTGTTGTAGCTTGTTGTAATGCTGAAGGGTCATTTTTGCCCCCGTATTGCATTTTTAAAGGGAAAAATAAGAAGGACGACTGGGCTGACGGTATGCCACCTGGTTCTTCTATTAGGATGTCCCCCAAATCGGCATACGTTAACAGTGAAATTTTTCTTGATTggttaaaaaatcattttgtccCTAGAAAAAGACTTGGTAAAGTACTTTTACTACTGGACGGACACACTTCGCATACTAATTCGATTGATGTGTTAGAATTTGCTGAAGAAAATGAGATAATTCTATTGTGCTTTCCGGGTCATACCACTCATTATTTGCAACCACTGGATCGAGCTTTTTTTAAATCGTTGAAGTCGCATTACTATgcggaatgcaataaatttataagaatcaAACCAACAAGAAAATTGAATAGAACAGTGTTTGGAAAACTATTTGGAGATTCGTGGAACAAAGCAGCCACCGCGCAAAATGCCATTTCTGCCTTTAGGGCTACTGGTGTTGTACCACTTAACCAAGATGCAATTCCTGAGTATGCCTTTTTAATGCTCGATGATGATAACGTTCAGCCACCAAATTCATTCCAACCATCACCGTATCGTTCAAACTCACCACAACCGGGCCCATCACACGAATATGAAACTCGGCGATCTTGCACTCCGCCGATTCAACATTCTCGGACTAACAATCAAGTATTGGTAGAAACACCAAAGAAAACTCCAGGAAAATTGCTGGATGAAGTTTCCCCGATCCCAGAAATTAAACCCTTAAGTGAAGTAAGAAAACGTGGAAGAAATGTGGCAACACAGCAAAGATGGGTGCAaaacaaaatcaaatga
Protein Sequence: MPNIYTRKGNVHRGNWTSRALQDALTAVANGAMGLNEAARNFGIPATTLKRRKRNGNPTKQNRLGPPSSLGEDAEIKLVRHIKKLQKFGFAPTRDVLRRMAYDLAEKMNIKHKFNRATGKAGFVWLQLFLRRHPDLSVRKSEGVSLLRSQGMSRKAVSDYFKLLENTLIENDLLEKSGNIYNMDETGLQLNNKAGHVVAAKGSKTISAITSGEKGETISVVACCNAEGSFLPPYCIFKGKNKKDDWADGMPPGSSIRMSPKSAYVNSEIFLDWLKNHFVPRKRLGKVLLLLDGHTSHTNSIDVLEFAEENEIILLCFPGHTTHYLQPLDRAFFKSLKSHYYAECNKFIRIKPTRKLNRTVFGKLFGDSWNKAATAQNAISAFRATGVVPLNQDAIPEYAFLMLDDDNVQPPNSFQPSPYRSNSPQPGPSHEYETRRSCTPPIQHSRTNNQVLVETPKKTPGKLLDEVSPIPEIKPLSEVRKRGRNVATQQRWVQNKIK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00065122; iTF_00065219; iTF_00065125; iTF_00065136; iTF_00065126; iTF_00065190; iTF_00065096; iTF_00065129; iTF_00065098; iTF_00065130; iTF_00065131; iTF_00065146; iTF_00065134; iTF_00065367; iTF_00065123; iTF_00065179; iTF_00065119;
90% Identity: iTF_00065123; iTF_00065126; iTF_00065150; iTF_00065122; iTF_00065219; iTF_00065156; iTF_00065125; iTF_00065223; iTF_00065096; iTF_00065129; iTF_00065130; iTF_00065155; iTF_00065471; iTF_00065131; iTF_00065134; iTF_00065165; iTF_00065136; iTF_00065367; iTF_00065119;
80% Identity: -