Asol039162.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720676.1:125474587-125486647[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-06 0.00012 24.8 0.0 1 39 17 55 17 60 0.88 2 2 4.5e-05 0.0024 20.7 0.0 9 38 526 556 521 560 0.89
Sequence Information
- Coding Sequence
- ATGCCGACGTTCtacaaaagacaaacaagatcTTCAAGGGGTCAGTGGAGTGAAGATCAACTCAACAGAGCAGCCCGTACCGTTCAGGAGGGTCAAAACATACTTCAAGCTGCAAAAACGTACTCCATTCCATGGTCAACGTTAAAACGCAGACTTGTTAAAGGCAGTTTTAAGAAAACGTCAATGGGTCCATCGTCTCATCTAGGCGAAGCAGCTGAAAAGAAGCTTGTAAAGCACATTCTGAAGCTTCAACGATTTGGATTTTCACCAACACGGAATGAAGTGCGTTCTATGGCATTCAAATTGGCAGAACAGTTGGGAGTACGGCACACTTTTAACCGTGATAAAGAAATGGCTGGTTTTGATTGGCTTCGTCTTTTTTTGAGCCGAAACCCTGAGCTTAGTGTACGGAAGTCTGAAGGCATTTCACTAGCTCGCGTGAGAAACTTAAACAAAGAGGCTGTTTCACAATATTTTGACTTACTTCAAGACATTTTGGTCAACAATGACTTGGTGAACAAGCCAGCTAATATCTTCAATGTTGATGAAACCGGATTACAGCTCAATAACAAACCAGGCTACGTGATAGCTGGAAAGGCATCCCGAAATGTTTCAAGCATAACTTCTGGTGAAAAAGGCGAAACGATATCAGTCATTTCTTGCTGCAATGCTGAAGGAAACTTTCTTCCACCGGCTTGTATATTCAAGGGTAAAAATGAAAAGGCTGATTATAAAGACGGCATGTCAACGGGTTCTACTGTTTATATGTCACAAAAATCACCATATGTGAATACCGATATTTTTTTACTTTGGCTGAAAAACCATTTTGTACCAAGAAAGCCAGAAGGCAATGTTTTGCTTATACTCGACGGTCACAGCTCTCATTGTAGTTCAGTAGAGACTCTGGAATATGCAGAGTCGAAAAACATCACATTACTATGTTTACCAAGTCATACCACCCATTACCTTCAGCCACTTGATAAATCATTTTTCAAGGCCTTGAAAAGTTTTTACTACAATGCttgcaatacctacatgaaacTGAACCCAAGCAGAAGAATAAACAGGTTGTCTTTTGGTAAACTACTGTCTGAGGCGTGGGAGAAAGCCACTACGCGTGATAATGCTACGTCCGGTTTTAGGGCGACGGGCATTTACCCCTTTAATCCTCGAGCTATTCCCGAATACGCCTATTTAGCCACACAAGATCCTTCAGCAGAAGCTACTCACCAAACAAGAGAGGAAAATCAAGAACGATTAACAAGAGATGTAACGCCTCAACCTACTACATCGAAGTCTTCTGCTTCAGTTGGACGAAAAAGATCAAGTGAAGATGAGGAAATGCCGCTTCAACCCAGTACTTCAACATCTGTTGCTTCAGTTGCACGAAAAAACTCAACAGATCAGGAAGGATTAGGTGATCAGTTAATAACACCAGGAAAAATGTTGGACCAAATATCACCAGTTCCAGTTGAGAAAGTCGAAAAAAACAGTTTTTTAGATATGATAGAATGGGACGCAATTGCAAAAGAAAGTCTACAGCACAGACTTGGTCTGCTGAATATGAAGAAACTAATAGAACAAGTTCTATCTGAGGCAATAGGGTACAGGAAAGCTGTTAAAACGTACAACGTTCCGCAATCTACTTTGGAAGATAGGataaagaagatgaagaagaacggATCTTCGTCGGAAAAGGCTTCTTCTAAAGGAATGGGAAAgtgtaaatgtgttttttctcAGAAGAACAAAAGAGTTTCAGGGCTATGTCCAGCACATGGAAAGCCATATTGGACACATGAGGGATATAAAGGGATGGCTTGA
- Protein Sequence
- MPTFYKRQTRSSRGQWSEDQLNRAARTVQEGQNILQAAKTYSIPWSTLKRRLVKGSFKKTSMGPSSHLGEAAEKKLVKHILKLQRFGFSPTRNEVRSMAFKLAEQLGVRHTFNRDKEMAGFDWLRLFLSRNPELSVRKSEGISLARVRNLNKEAVSQYFDLLQDILVNNDLVNKPANIFNVDETGLQLNNKPGYVIAGKASRNVSSITSGEKGETISVISCCNAEGNFLPPACIFKGKNEKADYKDGMSTGSTVYMSQKSPYVNTDIFLLWLKNHFVPRKPEGNVLLILDGHSSHCSSVETLEYAESKNITLLCLPSHTTHYLQPLDKSFFKALKSFYYNACNTYMKLNPSRRINRLSFGKLLSEAWEKATTRDNATSGFRATGIYPFNPRAIPEYAYLATQDPSAEATHQTREENQERLTRDVTPQPTTSKSSASVGRKRSSEDEEMPLQPSTSTSVASVARKNSTDQEGLGDQLITPGKMLDQISPVPVEKVEKNSFLDMIEWDAIAKESLQHRLGLLNMKKLIEQVLSEAIGYRKAVKTYNVPQSTLEDRIKKMKKNGSSSEKASSKGMGKCKCVFSQKNKRVSGLCPAHGKPYWTHEGYKGMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00067841; iTF_00067714; iTF_00067883; iTF_00067628; iTF_00067729; iTF_00067923; iTF_00067799; iTF_00067800; iTF_00067770; iTF_00067866; iTF_00067740; iTF_00067772; iTF_00067836; iTF_00067837; iTF_00067838; iTF_00067839; iTF_00067456; iTF_00067840; iTF_00067782; iTF_00067846; iTF_00067783; iTF_00067785; iTF_00067754; iTF_00067711; iTF_00067683; iTF_00067753; iTF_00067768;
- 90% Identity
- iTF_00067711;
- 80% Identity
- -