Asol131540.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720682.1:75675196-75679964[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.8e-06 0.00031 23.6 0.0 1 38 14 54 14 56 0.91 2 2 1.6e-05 0.00087 22.1 0.0 3 35 628 661 626 663 0.91
Sequence Information
- Coding Sequence
- ATGCCACGGAGCAAGACGGGAAGAAAACGTGAACATATTGATCCAGAAGCAATACAAAAAGCAATTGAAGCTGTGTGCGCTGAAGGAGAcaataaaatttctattagagAATCATGTAaagtgtttaacattaaatttacaACATTAGTTCGGCATTTGAAGGCTTTTAGAAATTCTGGGAAAGAGGAGTTCAAATATGATGTTCGGTACGACACTAGAAAAGTATTTTCAGAAGCAGAAGAGCTCTGTTTGGTAGAGTATATCAACAAAGTAGCTAAGATGAACTATGGATTGACAAAGAAAGGAGTTCGGAGTCTAGCTTATAAATTCGCAATGGCCAATAATAAGAATCGACCTGTCAAGTGGGATGAAGAAAAAACAGCTGGAGAAGAATGGTTGAGACTATTTATGACAAGGCATACTGCGAAGTTAACCATTAGAAAGCCAGAAAAGACAAGTTTGTCACGGGCAACTGCTTTCAATCCTACCAATGTTGAAACATTCTTCAAAAATCTCGAAGATGCACAGTTGAGATTAGGACCTTTTCCTCCTCATCGCATCTGGAATCAAGACGAAACCGGGCTAACAACAGTACAGAATCCCAACAAAATTGTTGCCCCAAAGGGTATAAAGCAGGTAGGAAGTGTGACATCCGGTGAACGGGGTCACGTCGTCACATTGTCTGCTTGCGTAAATGCCATCGGTAACCACATCCCTCCATTGTTAGTGTTTCCGAGGGTAAACTTCAAGGAGTACATGCTTTATGGTGCACCCCCTGGAACAATTGGTGGGGCGAATCCCTCAGGATGGTCTAACGAATTATTATATGTGAAGTTTATGGATCACTTCATAGCTCATGTAAAACCGTCAAAGGAAGAACGTGTTTTATTAATAGTAGATAACCATGAAACACATTTATCTCTGCAAGTTATTGAAAAAGCATCAGCAGCAGAAATAGTTGGCCAAATTTACCCTAAAGCATTTAGTACTAGTAATATTTTAAGTGGTTTTACGAAAACAGGAATTTATCCATTTAACAGACAAGTATTTTCAGAGCAGGACTTTCTTGGAGCTTACGTCTCCGATCGTCCAAACCCTAACGACACTTTCCCAGTTAAAAATTCAGTCAGTACAAGTTTAAATCTAGCTGTTATCCAGTCTCCAACGCCACCTACTACGCCTATTATGACTAATGCTCATCGAAGCGAAGATGAGCCGTCTACTTCAGCTGCAACGCTAAATCAGAATGAAAATAGATCTAATGATCTTAGATCTCCTGAAGAAGTTCAGCCATACCCGAAGGCAGCACCTAGGAAGACCAACAGACGAGGTAGAAAACCTGGAAGAAGCAAGATAGTAACAGATACACCCGAAAAAGAAGCTATAAGGATAGAAAAGTCTAAGAAAAGAGAAGGCCTGCCAAAATCAAAGACTACTAAGCCACCTGCAAAAAATGACGATCAAATTGATATGTCTGATGTTGATGACTCTGATAACGATGATAACTTTTTTGCATCAACTAACGCTGAATTAGCCGACGCTCAGGAGGAGCTTGACTTTGAAAGATCCAGTTTCAATAATGGCGATTACGTTCTTGTCAAGGTTGAGAAGAAACGAGGGCCAACTGAGCACTATGTTGGGAAAATTATTTCTAAAGACTGTGATGGGTGTGAATTCCAAATACAGTTTTTCAAACGTATTAGCTTGAGTAACAAATTTGTCATAGAATCATCGCAATCATTTGATGTAAATGAGTCAGACATTTTACTCAAACTGCCTAAACCATCAAAGTGCAGTGGTTCAACTCGAGTTGCAGAACAAGTGTGGTTTAAGATGTCAAAACACAGAAATAAATTGAGTAATAGAAGATCATGGACAAAAGAATTAATGGAAAATGCTGTTAAAGCCGTTTTAGAATTTGAAACGTCCGTTAGGGATACTGCTGTGCGCTTTGGCGTTCCTAAGAGTACTCTACAAGATAAAATATCACTTGTAAAACGATGtcagaaaataaaatttataccAAAATTAGGAAGATTCGAATGCACATTTTCTGACACATACGAAATTGAGCTGGTTAAACATGTGCAGAATCTAGATGGATGA
- Protein Sequence
- MPRSKTGRKREHIDPEAIQKAIEAVCAEGDNKISIRESCKVFNIKFTTLVRHLKAFRNSGKEEFKYDVRYDTRKVFSEAEELCLVEYINKVAKMNYGLTKKGVRSLAYKFAMANNKNRPVKWDEEKTAGEEWLRLFMTRHTAKLTIRKPEKTSLSRATAFNPTNVETFFKNLEDAQLRLGPFPPHRIWNQDETGLTTVQNPNKIVAPKGIKQVGSVTSGERGHVVTLSACVNAIGNHIPPLLVFPRVNFKEYMLYGAPPGTIGGANPSGWSNELLYVKFMDHFIAHVKPSKEERVLLIVDNHETHLSLQVIEKASAAEIVGQIYPKAFSTSNILSGFTKTGIYPFNRQVFSEQDFLGAYVSDRPNPNDTFPVKNSVSTSLNLAVIQSPTPPTTPIMTNAHRSEDEPSTSAATLNQNENRSNDLRSPEEVQPYPKAAPRKTNRRGRKPGRSKIVTDTPEKEAIRIEKSKKREGLPKSKTTKPPAKNDDQIDMSDVDDSDNDDNFFASTNAELADAQEELDFERSSFNNGDYVLVKVEKKRGPTEHYVGKIISKDCDGCEFQIQFFKRISLSNKFVIESSQSFDVNESDILLKLPKPSKCSGSTRVAEQVWFKMSKHRNKLSNRRSWTKELMENAVKAVLEFETSVRDTAVRFGVPKSTLQDKISLVKRCQKIKFIPKLGRFECTFSDTYEIELVKHVQNLDG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00067494; iTF_00067930; iTF_00067548;
- 90% Identity
- -
- 80% Identity
- -