Asol088950.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720679.1:33533958-33538612[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8e-07 4.3e-05 26.3 0.0 3 37 16 51 14 57 0.90 2 2 3.2e-11 1.7e-09 40.4 0.1 1 40 98 138 98 142 0.91
Sequence Information
- Coding Sequence
- ATGCCAAAGTATGTCAGGAAAACTACACGTCAGTCGTGGAGTAAGGAGAGCATGATTGGGGCAATTACTGAGGTTTGTGAAGGCAGGATGGGATACTTGAAAGCTTCTCGAGCTTTTGAAGTCCCTCAGTCGACTTTAGAGGACCGAGTTAACACTGTGAGAGCTGGCAAAGCTATGAAAGAAGCAAGCCAGAAGGGTAACTACAAATCAACAAAAAGAAACAGTAAAGGTATAATAGGGGAGGGTAGGATAATGCGAGAGTATAAGCGAAAAACCAATCAACAAGGGTGGTCGGAAGAGAATATGAAATCTGCTATTGCAGCTGTAAGAATGGGAAATCTCAGCCAAAATAAAGCGGCAAAACAATTTGAAATACCAATTGCTACTTTATATAGACGCGTTAAGTCAGAAAAAGGCGATGAAGAAGCCGCAAAGAAAAAATTAGGTCGATTCATAACTGTCTTTAATACTGACCAAGAAAGAACTCTAGTTAATTACCTCCTTGAAATGGACAAAAGATTTTTTGGCCTTTCTTATAAAGAACTTCGAACACTAGCTTACCAATATGCTGAAGTAAACAATATACCAAATAACTTTAATAAGGAACATAAGACAGCAGGAAGGGATTGGTTATATCTCTTTTTAAAGAGACATCCGGAACTGACATTAAGAACACCGGAAAATACGTCGGCTGCAAGAGCCGCTGGGTTTAATAAAGTTTTAGTAGAAATATTTTACAATCTTTTAGGTGAATTGTATGACAAATATTCTTTTCGCGCAAACAATATTTACAACTGTGACGAAACCGGCATCACAACTGTGCCAAATAAGCCAATTAAAGTGATATCATTAAAGGGTAAAAAGCAAGTCGGAAGTTTCAGCTCTTCAGAAAGAGGGCTACTAGTTGCAGCTGAAATTTGCTTTAGCGCATCGGGACATTACATTCCTCCACTACTAATTATACCTAGAGTACGACGAAATCCAATTTACGAAGTCGGGCTGCCGCCAGAAACTGTTGTAGCTTTTCATAAATCAGGATGGATGCAATCTGATATCTTTTGTGATATTTGGTTTACTCACTTTTTAAAACACGCACGTCCTAATAAAGAAAATCCAATTCTTTTAATTCTAGATGGGCATGCAACTCATGTAAAAAATTTGAAGTTAATTGAGAGAGCTAgagaaaataatgtacatattctGTGTTTGCCACCGCATACATCTCATAAATTGCAACCAGTTGACGTGTCCTTTATGTTTCCGTTGAACATTGACTTTACTGCTGCAACTTTAACCGAGAGAGAAGATCCCAATCATGCTGAAACTTCACTACTCGACCAAAAAAACAATTCTGTAGATGCAGTGGTTTTTGTAAAAGAAACGAGTCCTTGTTGCACTACTGTCACATCACCTGAAGATATCATGCCAATACCGAAAGTTATACCAAAACAAATCACCAATAGATGCCGTCAACGTGGGAAAACAGCTGTTATTACTGCATCGCCATACATGAACGAACTTAAAGATAATCAAACTAAATTACCTGCAAAATCTATACAGCAAGTAAAACGAAAACTGTTATCTCAAGAAACAGCTCAATGTTCTAAAAAGTTTAAATGTAATGATAATTCTACTGACTCTGAAGATTATGAAACAGATCATCTGTGTGAAGATGATTCAAATTCTGATTACGCTGAAAGTAAGGAAATACCAGACATGCGTGATAAGCAGGagcaaatatttactttggtGCAGAGAGAGATTGTAAAAGACGATTTCATTCTTGTTTCTTTAAAAGAAGAGAAGAAACAAACTGAAAAAGAATTTGTAGCTAAAGTAATACGTGTTGTTGAAGAAATTGCTGCAAATCAAAACACCTCTTATGAGGTAAAGTTCATGAGGAATTACAGATCACATTATGATACATTTATATTTCCTGATGTTGATGACATcaAAGCTACATCCATTGGACGTGCAATCGGTTTTAATCGTACGGCCGTGGAGAAATTCTTTTCCTTGTTGACTGAAGTCTGTGAAAAGTACAAATTTCCACCAGAATGCATATGGAATGTTGATGAGACTGGGATTACAACAGTTCCGAATAAGCAGTCTAAAGTGATTGGCCTAAGAGGAAAGAGGCAAGTTGGAACTTTGGTTTCAGCCGAGAGGGGAACTCTTATCACAGCCGAAATTTGCATGAGTGCAGCCGGTGAATATATGCCGACCCTGTTTATTTTTCcacgaaaaagagaaaaacctgaATTGCTAGACGATGCTCCTCTAGGAACCGCAGAGTTTCATCCAAGTGGGTGGATTCAGAAGGACATTTTTATCAAATGGTTTAAAAGATTTCTCACTAAAGTAAAACCTTCTGCAGAACAACCAGTCCTATTATTGCTAGACGAGCCTGCCACCCGCACGAAGAGCAATGATTTGATCAACATGGCACGTGAAAATAATGTTGTTTTGTTATGTTTTCCTCCCCATTGCACTCATCAAATGCAACCCTTAGATGTTTCTTTCATGGCACCATTGAGCACCTATTACGGAGAAGAAGCAAGAAAATGGCTTCCTGATCACCCTGGCAGATGTATTACAATCAACCAAATTGGAAAGCTTTTCGAAGTGGCATTTATGAAGGCAGTAAGTGTTCAAACTGCTGTCAATGGCTTCAGAAAAACAGGCATATTTCCACTAAATCCAGGTGTTTTTGAAGACTGGATGTTTGCTCCATCAGAGAGTACTGAGAGATCTCTTACTGACCCGAATATTTTCACGACAACAAATCCGCCTTCTGTGATAAAAACTAACTGTACACAATCGAATTCTTTTGTTCCAAATGTGGTCACCCCCGTCTTTAATGATTCAACATCAGCGGAACGATCGAGATTAGCAAAATCTACTGATCTTGTTCAGAATTGTTCAACGCCTTCGTCATCACGTTCGCCACAACCGAGTGGTAGCCTTACCGTGACTCCGAAAGAAATATTCCCATTTACGCAGGCCACACGAAAAAAGGACAATGATAGAAGGCGAGGACGCCACAACTCTAGAACGTTGTGTGGTGACgagaaatatattaacaaaaacaaacaagaaaaattcAAAACAACTGTCAAAATCGAGAAACCATCAATTGTACAGGATAGTGAAGATGACTCAACATCCGCAGATGAAAATGAGAATACGTCCTGCACATATTGTAACGAATTATATTCAAATTCGAAGTCTGGCGAAGGATGGATCATGTGCAATTCATGTCAAAAATCGTCTCATGATGCTTGTGCTAACGTAGATGAAGCAGATGATTACTTCGTTTGTGATTTTTGCGCAAATTAA
- Protein Sequence
- MPKYVRKTTRQSWSKESMIGAITEVCEGRMGYLKASRAFEVPQSTLEDRVNTVRAGKAMKEASQKGNYKSTKRNSKGIIGEGRIMREYKRKTNQQGWSEENMKSAIAAVRMGNLSQNKAAKQFEIPIATLYRRVKSEKGDEEAAKKKLGRFITVFNTDQERTLVNYLLEMDKRFFGLSYKELRTLAYQYAEVNNIPNNFNKEHKTAGRDWLYLFLKRHPELTLRTPENTSAARAAGFNKVLVEIFYNLLGELYDKYSFRANNIYNCDETGITTVPNKPIKVISLKGKKQVGSFSSSERGLLVAAEICFSASGHYIPPLLIIPRVRRNPIYEVGLPPETVVAFHKSGWMQSDIFCDIWFTHFLKHARPNKENPILLILDGHATHVKNLKLIERARENNVHILCLPPHTSHKLQPVDVSFMFPLNIDFTAATLTEREDPNHAETSLLDQKNNSVDAVVFVKETSPCCTTVTSPEDIMPIPKVIPKQITNRCRQRGKTAVITASPYMNELKDNQTKLPAKSIQQVKRKLLSQETAQCSKKFKCNDNSTDSEDYETDHLCEDDSNSDYAESKEIPDMRDKQEQIFTLVQREIVKDDFILVSLKEEKKQTEKEFVAKVIRVVEEIAANQNTSYEVKFMRNYRSHYDTFIFPDVDDIKATSIGRAIGFNRTAVEKFFSLLTEVCEKYKFPPECIWNVDETGITTVPNKQSKVIGLRGKRQVGTLVSAERGTLITAEICMSAAGEYMPTLFIFPRKREKPELLDDAPLGTAEFHPSGWIQKDIFIKWFKRFLTKVKPSAEQPVLLLLDEPATRTKSNDLINMARENNVVLLCFPPHCTHQMQPLDVSFMAPLSTYYGEEARKWLPDHPGRCITINQIGKLFEVAFMKAVSVQTAVNGFRKTGIFPLNPGVFEDWMFAPSESTERSLTDPNIFTTTNPPSVIKTNCTQSNSFVPNVVTPVFNDSTSAERSRLAKSTDLVQNCSTPSSSRSPQPSGSLTVTPKEIFPFTQATRKKDNDRRRGRHNSRTLCGDEKYINKNKQEKFKTTVKIEKPSIVQDSEDDSTSADENENTSCTYCNELYSNSKSGEGWIMCNSCQKSSHDACANVDEADDYFVCDFCAN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -