Asol023102.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- -
- Assembly
- GCA_963170755.1
- Location
- OY720675.1:219020683-219038621[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.8e-09 2e-07 33.8 0.0 1 39 197 236 197 240 0.90 2 4 7.4e-11 4e-09 39.2 0.2 1 39 251 289 251 292 0.95 3 4 5.5e-17 3e-15 58.8 0.0 1 45 306 351 306 351 0.98 4 4 1.4e-14 7.7e-13 51.1 0.0 1 40 358 398 358 402 0.93
Sequence Information
- Coding Sequence
- ATGATTTGTCACAAGTCCACTTTCTCTCTGGGTCCATACCAATCACAAAATATAtcaactttgtcaaatttaaacctatgCTCTACCTCCCGTAATAAGCGAGATCACAGGGGTCTCACTTTCTCATTCTCTCAGTTCGGTGTGGATAACGATGACTTTCCACCAGAACCACCGGCGCCAACAGCCATTCCCGTAGGAAATATAGAAATGCACGAACACTCACCCACCAGAACGTTACTAACTAATTCTTCAATACATAGGACAGATTTATCAGATTCACACAAATTTTCGTCGGACATAAAGAAAGAAATTGTCGACATCAAGTTCGAAACGCTCCGATCTTACGATGGCGAACAGTCCATATTGGACATGGAGGCGTCACAGATGTCCGGACCCGATCATTCCATGGACAGTCACGATGATGACCAGGGGATGCACACGATGATGATTACGCCGGACATGATGGGAATGATGCCAGGTTCGGGCCTTCACACGTTAGATTCGAATTGTGGCGATTTATCTATGAAAAGTAACGGTCATTCGGAACACACGGGACCGGGTAGACACGGGGGAGGGCCTAAAACGTGGACCCAAGAAGACATGGACCTAGCACTAGATGCCTTAAAAAACCACAACATGAGTTTAACAAAGGCTTCCGCCACTTATGGTATTCCTTCGACGACGCTGTGGCAGAGAGCGCACAGATTAGGTATAGATACACCGAAAAAAGAGGGACCCACAAAGTCGTGGACGGAAGAAAGCTTAAATTCAGCACTCGAAGCGCTGAGAACGGGGACAATATCAGCCAATAAAGCCAGTAAAGCCTATGGTATACCTAGTAGCACTCTGTACAAAATTGCAAGGCGAGAGGGTATTAGACTTGCGGCTCCATTTAACGCAGCACCAACGACGTGGACACCTGAGGATTTAGAAAAAGCCTTAGAATCTATCAGATCCGGTCAAACGTCAGTACAAAAAGCTTCCACAGAATTCGGTATACCCACCGGCACACTGTACGGGAGATGTAAGAGGGAAGGCATAGAACTCTCTAGATCGAATCCTACACCCTGGTCTGAGGACGCGATGGGTGAAGCCTTGGAAGCAGTCAGatTGGGTCACATGTCCATCAATCAAGCTGCAATACACTACAATCTGCCATACTCGTCCCTCTACGGCCGCTTTAAGCGCGGCATCAAATACGAATCGGAAAATTTAGACGTGAACTCGGACAGCCAATCGCACTTGGACGCTCAAGTTCACATGATGGACTATTCCGCGAATTCGCATCAGCAAATTAATTATCAACAACATCCGTCGAACAGCTGA
- Protein Sequence
- MICHKSTFSLGPYQSQNISTLSNLNLCSTSRNKRDHRGLTFSFSQFGVDNDDFPPEPPAPTAIPVGNIEMHEHSPTRTLLTNSSIHRTDLSDSHKFSSDIKKEIVDIKFETLRSYDGEQSILDMEASQMSGPDHSMDSHDDDQGMHTMMITPDMMGMMPGSGLHTLDSNCGDLSMKSNGHSEHTGPGRHGGGPKTWTQEDMDLALDALKNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEESLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRSGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYESENLDVNSDSQSHLDAQVHMMDYSANSHQQINYQQHPSNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -