Basic Information

Gene Symbol
ct
Assembly
GCA_963170755.1
Location
OY720677.1:143410336-143428052[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.9e-32 1e-27 99.1 0.0 2 77 715 791 714 793 0.96
2 2 2.4e-30 8.5e-26 93.0 0.0 3 75 931 1004 929 1008 0.95

Sequence Information

Coding Sequence
ATGAGTGAAATGAATTCTCGATGCcagGTTGACCTCATCGATATGCAGAGTGAACCTGATGGagaatataaatttattcttaattatcaagatcatcTAACGAAATATGTTATATTGCGACCACTTAAAACAAAAACGGCGGATGAAGTAGCAGAAGTTATTCTTGATATCTTCTGTTTGTTTGGTGCTCCGAACATATTACATAGTGACAATGGAAGAGAATTTTGTAATCAAGTAATCGAAAAGTTAGCAGCAAATTGGTCTGCTCTCAAATTGGTCCATGGCAAACCTCGACACTCCCAAAGTCAGGGTTCCGTTGAACGAGCAAATCAAGATGTTCGTGATAGTCTTGTAGCCTGGATGTCAGACAATCAATGCCAGAACTGGGCAAAAGGTCTTCGCATTATTCAAAGCACAAAAAATCGCAGTTTCCATACGGGTATAAAGCGAACACCTTATGAGGCTATGTTTGgaagtccacaaaaaaatgggCTATTGGATACATGTTTAGATACCTCTGTCATAAATACAATTAAGACTGAAGAACAACTAGaagaacatttaaaattaataaaagagtcTTTGGAAACAAATACCATAAATGAGGAACCTAATGCGACAACAACTGAGTCGGAATTAGAAACCGAAATGGAAATTGAAACAGAAAATGATAGCAGAGATGGAAACGTTAACGATGATAATAAGAATGACACTGACAGTATGACCAAATGTTTTATTTGTGATAATATGTATGTCCCTCGTATCCAAAATGTATGTATTGAATGCAATGAGTCACTTCATATCGAATGTGCTGCTAATTTGGATTTACCATTATGTCAATTATGTAGCAATAAAAGAGCAGCTGATACGGAGAGAAAAGGTTGCAAACGGGGGCTAGAAAAACAGGCTGATAAAATGCTTGCCCAATCACAACATAAATTCCCACCTGCCAATATAGGTGACAATGTTTTAGTAAATATACCAGAAGTAGATCGGGGACGTCTAGCTCCTAGGAATGTATTAGCAATCATTATAGACAAGACTGACCAAGGTTTTTATATTCTCggtactaaaaatggaaaactAAAACGATTATATAGCCGAAATGAGTTTCAATTGTCACCTTCAGTATTTTTATCATTATCTGAAGTGCCATCAGATTCTTCTGTTAACGTGCGAGAAGAAGCAAAATTATCTTCTGGGTCTAAGCAAGGTTTTATTCGGTGTAATTGTTGGAAAGGGTGCCACACAAAAGCATGCAAAGATTCCGGAATACCCACATTCGGAAGGCCTGAAAACGAATACCCCGATGATAGGATAGCGCACATCTTGAGTGAAGCGTCGCACATGCAAATGAAGACACCGCTCGAGGACAGTCACAGTAACGACGACTCCAAATCACCGCAGGGCTGTCCCAGTCCGTTTTCGAAAGACTCCTCGCAGAATAGGAAGCTGAAAAAGTACGAAAACGACGACATACCTCAGGAAAAAGTCGTCCGGATCTACCAGGAAGAATTCGCGAAGCTCATGGGACGAAGAATAGACGACATTCGAAACTCCAGAGACGTTGTTCACAGTATGTTTCTGCCGCAAATATTCAGCGGAGCGCCGATGGATAGGACCCAAGACGATATCAGAGCTGCCATCGACGCTTACCACAGAGAATTGGCGAAGATCAATCAATGCCAGACGCCGAATCAACTGCCTAATCTAGGTCTGCTTGCGTTGCAACAGCAAGCTTTAGCGAATCACAATCCTGCGGTTAATGGTGGCGCGCAAGATCTCTCACTGCCGAAAGAGAAAATCAAAATGATGAACGGGACTGATGACAAAGATAAGGACGAGGAATCTTCGAAGCATTCCGGAAGCGCTTTCAGCTTGGTACGTCCGAAGATAGAACCCGGAACGACACCTCAAACGACTAGTTCGACGGCGTCAAGTCCACTAGGTAACACGATTCTACCTCCCGCGATGACACCGACTGATGATTTTTCCGGATCGGCCGCCGCCAGTCCACTACAGCGGATGGCCTCCATTACGAATTCGTTGATCTCGCAACCACCAACTCAACCCCATCACACATCCTCGCAACGACCCTTGAAAGCCGTACTCCCGCCGATAACGCAACAACAGTTCGACATGTACAATAATCTGAACACCGAAGATATCGTTAAAAAAGTGAAAGAACAGTTGAGCCAGTATTCCATAAGCCAAAGACTTTTCGGCGAGTCCGTTCTGGGATTGTCCCAAGGGTCGGTCAGTGATTTACTGGCGAGACCTAAACCGTGGCACATGCTTACGCAAAAGGGACGGGAACCCTTCATACGAATGAAGATGTTCTTGGAGGATGACAACGCCGTTCACAAACTGGTCGCGAGCCAGTACAAGATCGCACCGGAAAAGCTGATGAGGACCGGAGGATACGGAGCTGTTCCTTATTACATTTCAGCGTGCGCCTCGGTGGCTAAACCGATGCCTCCGACGCCGAAGATGATTAGCGAAGCGGCGGGTCTCCTGAACAAAGTGCAGGAGACTCAGAATCTGCTGCCACCATCGCTACAGATGATCCATCACAATCAGAATAATCCGCAGCCTCCGCCACCGCCCATGCTTCTGACGCCACCCGGTGTCCCGCCGCACCACACGATCAGTCTGCAAGCTCAAGAACACATCAAAAAGAGCAACCACAGTCCGCACGGCATCCCTCCATCGCCGATCAGTCAACAGGGGGCCATGCGAAGTATGCACCAACACATTTCACCCAGCGTCTACGAGATGGCGGCGCTGACTCAAGATCTCGACACGCAAGTGATCACCACGAAAATCAAGGAGGCCTTGTTGGCGAATAACATAGGCCAAAAGATTTTTGGTGAAGCCGTATTAGGTTTGAGCCAAGGTTCTGTATCAGAACTGCTGTCCAAACCTAAACCGTGGCACATGTTGAGCATCAAAGGTCGGGAGCCCTTCATCCGGATGCAACTGTGGCTGAACGACGCTCACAACGTCGACAGGCTGCAAGCTCTCAAGAACGAACGAAGGGAAGCCAACAAACGGAGACGTTCATCGGGAGCCGGTGCCCACGATAACAGCTCGGACACGTCATCAAATGACACGTCAGAGTTTTACCACTCCAACTCGCCAGGTCCCGGACCTCCATCATCGAAAAAGCAACGAGTTCTGTTCAGCGAAGAGCAAAAGGAAGCGCTTAGGTTAGCTTTTGCCATGGATCCGTACCCGAACATGTCGATTATGGAGTTTCTGGCTGGAGAATTGGGTTTGTCCAGTCGAACCATAACGAACTGGTTTCACAACCATCGGATGCGGTTAAAACAGCAGGTACCTCACGGCATAGCCACCGATATACCGCCCAGAGACCAGACAAACAATCAAACACCATTCGATCCAACCCATTTCAAGTTATTACTAAACCAAAGATTATTAGAACTGAACAAAGAAAGAATAGGACTAAGTAATTTGCCACTGGGGTATCCCTATATCGCGGCGAATCCCAATCTGGCGGCTCTAATAGGGCGGGGATTGTTGCCCACGGGGGAAATGGATTTGTCCGCCTTGAATAACGCCGTCAAAGAACAGATGAGCGGGTTGGATCTCTCCATGACGTCGTTGAAGAGGGAACCGGGAGATTTCGATGATGAAGACGACGTAGAAAGCAACGTGGGATCGGAAGACTCGAATATGTCGGGTAGTTTGCATAGGGGTGAAGTGAAAATTGAACAAAAAGAGACTCCAGTGTCGTCACAGGGTAGATCCTCGAGGAGAAAACCCGTCGCACCTCAATGGGTGAATCCCGAGTGGCAAGACGAGAAGGAGAAATCACAACATCAGCAGCAAAGTGGTGATGAGGTGATTATAAACGGTGTTTGTGTTATGCAGACTGAAGATTACGGTAGGAGGAATTCCGAAGAGACTGTCAGAGTGGAACCTACTCCCGTTATGGATAGGTTCGAAGATGATCAAAGTGACGCCTCTTCCGTTAGTCAAGGGGAAGAACAAAATCAAGAACAGAGACATCATCATCTGCACCATCAGGAGGACAAAGAAGAATTAGAAAGGAGCAACGAAGAAAATGAAACTGAAAAACAAGTGAAACAAGAGGTAGTGGAAGATGAACGGTGGGactattaa
Protein Sequence
MSEMNSRCQVDLIDMQSEPDGEYKFILNYQDHLTKYVILRPLKTKTADEVAEVILDIFCLFGAPNILHSDNGREFCNQVIEKLAANWSALKLVHGKPRHSQSQGSVERANQDVRDSLVAWMSDNQCQNWAKGLRIIQSTKNRSFHTGIKRTPYEAMFGSPQKNGLLDTCLDTSVINTIKTEEQLEEHLKLIKESLETNTINEEPNATTTESELETEMEIETENDSRDGNVNDDNKNDTDSMTKCFICDNMYVPRIQNVCIECNESLHIECAANLDLPLCQLCSNKRAADTERKGCKRGLEKQADKMLAQSQHKFPPANIGDNVLVNIPEVDRGRLAPRNVLAIIIDKTDQGFYILGTKNGKLKRLYSRNEFQLSPSVFLSLSEVPSDSSVNVREEAKLSSGSKQGFIRCNCWKGCHTKACKDSGIPTFGRPENEYPDDRIAHILSEASHMQMKTPLEDSHSNDDSKSPQGCPSPFSKDSSQNRKLKKYENDDIPQEKVVRIYQEEFAKLMGRRIDDIRNSRDVVHSMFLPQIFSGAPMDRTQDDIRAAIDAYHRELAKINQCQTPNQLPNLGLLALQQQALANHNPAVNGGAQDLSLPKEKIKMMNGTDDKDKDEESSKHSGSAFSLVRPKIEPGTTPQTTSSTASSPLGNTILPPAMTPTDDFSGSAAASPLQRMASITNSLISQPPTQPHHTSSQRPLKAVLPPITQQQFDMYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGAVPYYISACASVAKPMPPTPKMISEAAGLLNKVQETQNLLPPSLQMIHHNQNNPQPPPPPMLLTPPGVPPHHTISLQAQEHIKKSNHSPHGIPPSPISQQGAMRSMHQHISPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNVDRLQALKNERREANKRRRSSGAGAHDNSSDTSSNDTSEFYHSNSPGPGPPSSKKQRVLFSEEQKEALRLAFAMDPYPNMSIMEFLAGELGLSSRTITNWFHNHRMRLKQQVPHGIATDIPPRDQTNNQTPFDPTHFKLLLNQRLLELNKERIGLSNLPLGYPYIAANPNLAALIGRGLLPTGEMDLSALNNAVKEQMSGLDLSMTSLKREPGDFDDEDDVESNVGSEDSNMSGSLHRGEVKIEQKETPVSSQGRSSRRKPVAPQWVNPEWQDEKEKSQHQQQSGDEVIINGVCVMQTEDYGRRNSEETVRVEPTPVMDRFEDDQSDASSVSQGEEQNQEQRHHHLHHQEDKEELERSNEENETEKQVKQEVVEDERWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00065054;
90% Identity
iTF_00065054;
80% Identity
iTF_00065054;