Basic Information

Insect: Amphibolips quercusostensackenii
Gene Symbol: -
Assembly: GCA_032357855.1
Location: JAUELO010000085.1:5344594-5346649[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0044 2.2 11.2 0.1 1 23 247 270 247 270 0.97

2 9 1.4e-06 0.00067 22.3 0.8 1 23 276 298 276 298 0.99

3 9 1.7e-07 8.6e-05 25.1 0.9 1 23 304 326 304 326 0.99

4 9 0.072 35 7.4 3.3 1 23 332 354 332 354 0.97

5 9 1.4e-06 0.0007 22.2 0.2 1 20 360 379 360 380 0.97

6 9 0.5 2.5e+02 4.8 1.8 2 23 390 409 389 409 0.92

7 9 9.6e-07 0.00048 22.8 0.5 3 23 417 437 416 437 0.98

8 9 0.15 76 6.4 2.5 1 21 446 466 446 469 0.96

9 9 2.3 1.1e+03 2.7 4.1 1 21 475 495 475 496 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0044	2.2	11.2	0.1	1	23	247	270	247	270	0.97
2	9	1.4e-06	0.00067	22.3	0.8	1	23	276	298	276	298	0.99
3	9	1.7e-07	8.6e-05	25.1	0.9	1	23	304	326	304	326	0.99
4	9	0.072	35	7.4	3.3	1	23	332	354	332	354	0.97
5	9	1.4e-06	0.0007	22.2	0.2	1	20	360	379	360	380	0.97
6	9	0.5	2.5e+02	4.8	1.8	2	23	390	409	389	409	0.92
7	9	9.6e-07	0.00048	22.8	0.5	3	23	417	437	416	437	0.98
8	9	0.15	76	6.4	2.5	1	21	446	466	446	469	0.96
9	9	2.3	1.1e+03	2.7	4.1	1	21	475	495	475	496	0.91

Sequence Information

Coding Sequence: ATGACCAATACTCAGATTTTGGGGCAGGATCAACCCCAGGAGGAAGTCCATTTCACGGAACTCTTGCCAGTTGAACAATTTCGAATTCAAGAAGTAACTGATGACACTGCTGGTGCAACTGATGCTTTGAAGGCCCTAAGGAGTTTCTCTCaagttaataatgaattaaactcCCAGGAGTTCCAATTTTATAAGTTTGATGAAGTGAAGACACTAAATGGTTGCAAAGAATATCCTAGGAAGAGAAGGTCACCCAGATGGAGGGACTTGAACCCTGAAGAGGAAGCACTAACCCTTGAGGATGATTCTATCAAGACAGTCCctcaaaaaaaacctaaaaagagaaagaaaatcagCAATGGgacgaaaaaagaaaattctaaaaatgacaaGAAAGTTACAAAGAAGAAAGTTAAAAAGACTGAAGTTCTTGTTGAGTCGAGTTTGGATTCAGATTATTTGAATGAAGACATTGAGGATGAGATATACGCCTTCCAACACGATCCCTTAGAAAATAACGCCTCAGATGATTTAGAAAATGAAgtgtttaagaaaagaaaaacaaataaaaatgaggaTACAGCTGAAAAGAATCTGAGAGAGAAGATCGATGCGATAATCCAAGCTAATTATCGTCTAGAACAGGAAAATAATAACGTCATCCAGGGTGATGAAAAAACTCTAAGTCCTTCAGATTCTCTTGACAAGGGAACTGCTGTAGAAAAACAACCAAAGAAGTACACTTGTTGGATTTGCAGTGCGAAATTTAAAGGGGGTGGAGGATTGAGGAACCACTATAAAGTTGCTCATTCAAATGGTCCTCTCTATAAATGTAACGAGTGTGGGAAAGAATTTCCATTAAAGGAAAGATTAAAACTACATTTAAGAACACACACAGGGTTCAAGCCCTACAAATGTTCCGAGTGCGACAAGAGCTTTGCTAGAGGTGGACAGTTGATGCAACATCGAAGAACCCATAGTCAGGTGAAGCCTTTCCACTGTTCACTTTGCGCTGGGACATTTACCTGTGCTGCGAATTTGACGCTGCACATGAAGAGACACAATGGACAGAAAGATCACAAATGTGAGATTTGTGGAAGGGGATTTGTAAGAAGAGATGCACTCAAGAAGCATATGGATTGTCTTCATCATGAtgtaaaatcttttctttgtGTGATTTGTAATAAGACTCTGAAGGGACATCTTCCTCAGCATATGAGGACTCATGCTCAGGACAGACCGCATGGTTGTGCAACATGTGGCCAAAGGTTTGCCCAAAAATCTCAATTGACTGTTCACCAAAGGACACATTCTGGTCAAAGACCTTTTAGACCTTTTAAATGTGTAGAATGCATGGCTGGGTTCACACAGTTGCCTCATTGGAAGAAGCACATGAAGTGTATTCATGGAAGGAGTGAGCCGTATTGTTGTAGAAGATGCAAAACATTCTTCAGGATTAAAAGTGACTTGGAGTTTCACCAGAAGTTGTGTCGACTTTCTGCTAACACAAATtcagatgatgatgatgatcagGTGGAGATTTTTAATGACCGAATGAAGTATAGGGTTATGCCTATCGAGAAAATGCGATTGCTGTTGGCGGTTTTGCTGAAGAGAATCTCCCAGCCGGAGAGATTGGTTGAGCTGGGTTTTGGAAAAAGACTGATTGATGAAGTTCTTCAGGATTCTTTGATTTCTGCGGGAAAGCAGCCGGTTCAAGTTGGAGAAATTTCAGAGTTTGATAGTCTTAAGAAGAATGTCGAGATATTTTTGGAGTGGACGGTGCCGAAGAGTCACTGGGCAAacttcaaaaagatgaaaaaaagtcCTGAAGAAATTCTTCAGACACTGACCACTACGTAA
Protein Sequence: MTNTQILGQDQPQEEVHFTELLPVEQFRIQEVTDDTAGATDALKALRSFSQVNNELNSQEFQFYKFDEVKTLNGCKEYPRKRRSPRWRDLNPEEEALTLEDDSIKTVPQKKPKKRKKISNGTKKENSKNDKKVTKKKVKKTEVLVESSLDSDYLNEDIEDEIYAFQHDPLENNASDDLENEVFKKRKTNKNEDTAEKNLREKIDAIIQANYRLEQENNNVIQGDEKTLSPSDSLDKGTAVEKQPKKYTCWICSAKFKGGGGLRNHYKVAHSNGPLYKCNECGKEFPLKERLKLHLRTHTGFKPYKCSECDKSFARGGQLMQHRRTHSQVKPFHCSLCAGTFTCAANLTLHMKRHNGQKDHKCEICGRGFVRRDALKKHMDCLHHDVKSFLCVICNKTLKGHLPQHMRTHAQDRPHGCATCGQRFAQKSQLTVHQRTHSGQRPFRPFKCVECMAGFTQLPHWKKHMKCIHGRSEPYCCRRCKTFFRIKSDLEFHQKLCRLSANTNSDDDDDQVEIFNDRMKYRVMPIEKMRLLLAVLLKRISQPERLVELGFGKRLIDEVLQDSLISAGKQPVQVGEISEFDSLKKNVEIFLEWTVPKSHWANFKKMKKSPEEILQTLTTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00011410;
90% Identity: iTF_00011410;
80% Identity: -