Basic Information

Insect: Amphibolips quercusostensackenii
Gene Symbol: -
Assembly: GCA_032357855.1
Location: JAUELO010000236.1:1395903-1445841[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0035 1.7 11.6 2.3 2 23 314 336 313 336 0.96

2 14 0.0051 2.5 11.0 0.2 1 23 354 376 354 376 0.99

3 14 0.00015 0.075 15.8 0.6 1 23 434 456 434 456 0.98

4 14 0.026 13 8.8 0.2 3 23 461 481 460 481 0.98

5 14 0.0054 2.7 11.0 0.2 1 23 632 655 632 655 0.96

6 14 0.071 35 7.4 0.2 1 23 674 696 674 696 0.95

7 14 0.0005 0.25 14.2 0.5 2 23 707 728 706 728 0.96

8 14 0.00093 0.46 13.4 0.7 2 23 750 772 749 772 0.94

9 14 0.0001 0.051 16.4 0.7 2 23 775 797 774 797 0.96

10 14 0.02 10 9.2 0.1 1 23 802 824 802 824 0.96

11 14 0.00075 0.37 13.6 1.2 1 23 855 878 855 878 0.97

12 14 0.0028 1.4 11.8 0.6 1 23 943 965 943 965 0.98

13 14 1.8 8.9e+02 3.0 4.4 1 21 977 997 977 999 0.87

14 14 0.0015 0.76 12.7 0.8 1 23 1006 1028 1006 1028 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0035	1.7	11.6	2.3	2	23	314	336	313	336	0.96
2	14	0.0051	2.5	11.0	0.2	1	23	354	376	354	376	0.99
3	14	0.00015	0.075	15.8	0.6	1	23	434	456	434	456	0.98
4	14	0.026	13	8.8	0.2	3	23	461	481	460	481	0.98
5	14	0.0054	2.7	11.0	0.2	1	23	632	655	632	655	0.96
6	14	0.071	35	7.4	0.2	1	23	674	696	674	696	0.95
7	14	0.0005	0.25	14.2	0.5	2	23	707	728	706	728	0.96
8	14	0.00093	0.46	13.4	0.7	2	23	750	772	749	772	0.94
9	14	0.0001	0.051	16.4	0.7	2	23	775	797	774	797	0.96
10	14	0.02	10	9.2	0.1	1	23	802	824	802	824	0.96
11	14	0.00075	0.37	13.6	1.2	1	23	855	878	855	878	0.97
12	14	0.0028	1.4	11.8	0.6	1	23	943	965	943	965	0.98
13	14	1.8	8.9e+02	3.0	4.4	1	21	977	997	977	999	0.87
14	14	0.0015	0.76	12.7	0.8	1	23	1006	1028	1006	1028	0.97

Sequence Information

Coding Sequence: ATGCGTGGTACCTGCGTCCCACGTGGTTCGGGTCATACGCCATGCGGGCCAGTGCAGATCGCACGTCATGCGGGCCACAGCAGTGACGAGTTGATTTCGTGTACGCCACCCGAGCTAAATATAGTAGCACATAATTCCAATGATGATTTGTTGCTGCCATCGAAATCAAAAGCTCAGTACGAGTCTGCATACAACGCATTTGCAGACTGGAAGAAAAAATGTGGTACAAAGTCCTCTTTTGAGACAGTTTTGATGGCATATTTTGACGAACTGAGCAAGAAATATAAACCATCATCTCTGTGGTCGATCTATTCTATGCTCAAAAGGACgttaaatatcaaagaaaaaattgacatcGGCGCGTACCCCCGTTTGACAgcgtatttgaaaaaacaatctGCTGGATTTCACAGCAAAAAAACTCATAGGGAAGAAAGAGCACAAAGGAGGAGGAATCTGAAAGTGCTGGGAGTAAGAAAGGAGGATAACAAGGTGAAAAGTGTTATGAAAATCTTGGCCACGAATACGAAGTTAGCGgcaaaaatcaaaatatcttgtAAAGCTCCACCTGAAGACACGGGAGAACAAAAGAGATCTGCTAAACGCCAAGGGAAGGTTGGGAGGCTCGAGGATCTGGTGGGTGAAGGATCTAGTCGAAAGGGAAGAAAAAATCCAGGAATAGCTGAGAAGGGTAACGAGGAGACAATATGGGTGGTCGCAAATCAAAGAAAACATGGAAAACAAAGAATTGTGTTCGTCAGTGTTACAAGATTCGAATCTCGGCCTTCAATATCAGTCAGGGATAAAAATTTTGGAGAAAGTACATTGCCTCATCCGGTATCATTCATCGATTTCCAAGATTTTGCTGCAATAAGCAACGAAAAAGAACAAACGACCACTATCCTTGAACATGATCCACTCAGTGACGAATTTCGAACCACGTGTAAGCATTGTCGTCGAATATTTATTAGCACAGCGTTTCTGATGAAGCATATCGAGAAAGAACACATGACTGCTGAAACTTCTCCAGACATAGTTAAcgacccaaaaatcaaacaatataAATGCAAAGTATGCAACGCCATGCTCAGCAGTGCCATAGCATATCTTTCTCACTTGAAAATGCACGCCGCCAAAACTCCAGGCATTGAAATCACGAATCTAAGAACCGAAGTTTTCCCATCTACTGGCGAGAACTGTTTTTCAAACCTAATGGAACATAACGATGGTCATAAAGCGGAAGATtcgcctaaaaaatttcaaaaagtcagtCTTCTGAGAAGGACTGCCAAGCAAGATTTCAAATGTGATCTTTGCGAACTTTCctttcccaaaaaagatgaactgcgTTTGCATTTTCAAATCCATAAACTTTGGCTTTGTGACAACTGCGGTGATAAATTTTGGAGACAGGAAGATTTGCAAGAACATATGGAATCGCATAAACCTGTAATAGCTGACAGGTATATCAATAAACCCTTTCGTATCGAGATCGAAAATACATCACTAGTGCAAAATATACAAGTGAAAGAAAAGGAAACTACTGGAGAGAAAAATTGTGACAAAATCGCGAATCTTGATGCAGAGACTGAATCCGAAATATGCTTTGTAGATGTCCcgattaaagaagaaaaaataattcccaTTGTTGATATTGAAGAGGGCTCGAGTTCCAAAcatcaaattcttgaaaagcagAAGGAATTCGAAGCGCGAATCTCGACCAGACTTAATCTGTTGAAATCCGAATATAAAAGCAAGGAAGAAGTCGACAATAGAGAAGAGAGTAAAGACACCAATGATTTAGTCTACGTCTCTGATGAGAGTTCAGAAGAATCTGACCCATATTTAAAAGTAGCAATTGAAAAGGTCCTTGCGGACAGAAATAAAATGTACGTGTGCGAGAATTGCGCAGCAGTATTTTCCACAAAAGTTGGAGTTACTAATCACATATATAAGAAGCATCCCGATGATATTAAATCAAAGAACTCTTACTCGAGACATGAAGTTGATAATAAGTTTCTATGTGCAATTTGTAATCTCAATTTCGGGACGGTAGGGAAATATGAATTGCATCTAAAGAGTCATATGAAcactagttttaatttaaatagaaaagtttGTAACATTTGTGGTTATAAGTTCAGCAGTGAGAAGATGTACGGGTTACATATGCAAAATCATATGCAGAAAGACTGTGAGGAAAATGAAACTACGAAGCATCGAATTTTCGACTTCAACGATCTCAAGTGTGGATTCTGCGAGGAACAGTTCAACACGAATTCGATGCTGATGACTCATTTAAAATTCGCGCACATGCTTTCGTGCAAACAATGTAATGAGGAGTTTGAGACAgacgaaagtttgaaaattcacatgaggAAGACACATCGAGAATCAAAGTACATTTGCAATATTTGTGGAGATCATTTTGCTTCTCAGGAAAGCATTTACGAACACATAGTTGTGCATGGGACTGGAAAGACTGAAAAGATTCACGACAAgaataaaatcgATCCAGTGGATAAAAATCCTCAGCCAGGAATTGCGTGGGTTGAATTATTTGAGTGTTGTGATTGCAAAAAGCGGTATATTACTAAAGAGGCAGTAATCTCCCACATAACCACCATCCATGCCAAAGGTCAAGTAACGTATCATGCAAAATTCGAAGCGGTAAAAGTAAATATAAGGAAAAATCTTACACCTGTTGAAAATCCAGCACCTGTTGTAAGTCCAACacctgttgaaaatccaacagaGGATTTAAATCGGAGACAAATATATCATCATGTAGTCCGACCCTCTgcaaataaaactgaaaaactgTTCACCTGCGGTGTCTGTGGTTTAATAGTAAAGCGACATAGTATTTTAAAGGAACACATGATGCGACATACGAGGGACTTGCTCGATCAAGCTGCAGGAATTTACAGGTGTAATGTTTGCAAAAGAACAATGAGGTCTCAGCATTTACTCAAGTGCCACGAGGACTTACATAACGGTGTTAAACACCCCTTTGCTTGTGAAAAGTGTGATGAGAAATTCAGTGAATATCGCAAGTGGTATGTGCATCAGCGAGTGCACACGGGTCATTTGGCACAGAGTATATTTCGTATATCATACTCCATCTACGAGTTCCCTATCTTACGGATTTATCATACTGTAGCATTTTCTCTTTAG
Protein Sequence: MRGTCVPRGSGHTPCGPVQIARHAGHSSDELISCTPPELNIVAHNSNDDLLLPSKSKAQYESAYNAFADWKKKCGTKSSFETVLMAYFDELSKKYKPSSLWSIYSMLKRTLNIKEKIDIGAYPRLTAYLKKQSAGFHSKKTHREERAQRRRNLKVLGVRKEDNKVKSVMKILATNTKLAAKIKISCKAPPEDTGEQKRSAKRQGKVGRLEDLVGEGSSRKGRKNPGIAEKGNEETIWVVANQRKHGKQRIVFVSVTRFESRPSISVRDKNFGESTLPHPVSFIDFQDFAAISNEKEQTTTILEHDPLSDEFRTTCKHCRRIFISTAFLMKHIEKEHMTAETSPDIVNDPKIKQYKCKVCNAMLSSAIAYLSHLKMHAAKTPGIEITNLRTEVFPSTGENCFSNLMEHNDGHKAEDSPKKFQKVSLLRRTAKQDFKCDLCELSFPKKDELRLHFQIHKLWLCDNCGDKFWRQEDLQEHMESHKPVIADRYINKPFRIEIENTSLVQNIQVKEKETTGEKNCDKIANLDAETESEICFVDVPIKEEKIIPIVDIEEGSSSKHQILEKQKEFEARISTRLNLLKSEYKSKEEVDNREESKDTNDLVYVSDESSEESDPYLKVAIEKVLADRNKMYVCENCAAVFSTKVGVTNHIYKKHPDDIKSKNSYSRHEVDNKFLCAICNLNFGTVGKYELHLKSHMNTSFNLNRKVCNICGYKFSSEKMYGLHMQNHMQKDCEENETTKHRIFDFNDLKCGFCEEQFNTNSMLMTHLKFAHMLSCKQCNEEFETDESLKIHMRKTHRESKYICNICGDHFASQESIYEHIVVHGTGKTEKIHDKNKIDPVDKNPQPGIAWVELFECCDCKKRYITKEAVISHITTIHAKGQVTYHAKFEAVKVNIRKNLTPVENPAPVVSPTPVENPTEDLNRRQIYHHVVRPSANKTEKLFTCGVCGLIVKRHSILKEHMMRHTRDLLDQAAGIYRCNVCKRTMRSQHLLKCHEDLHNGVKHPFACEKCDEKFSEYRKWYVHQRVHTGHLAQSIFRISYSIYEFPILRIYHTVAFSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -