Aque029031.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Amphibolips quercusostensackenii
Gene Symbol
salm
Assembly
GCA_032357855.1
Location
JAUELO010000358.1:649385-656900[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 3.6e-06 0.0018 21.0 0.9 1 23 212 234 212 234 0.98
2 9 7.1e-06 0.0035 20.0 2.1 1 23 240 262 240 262 0.98
3 9 0.037 18 8.3 3.1 2 23 607 628 607 628 0.97
4 9 3.1e-08 1.5e-05 27.5 0.6 1 23 634 656 634 656 0.97
5 9 4.3e-05 0.021 17.6 2.6 1 23 666 688 666 688 0.98
6 9 0.0015 0.74 12.7 1.9 2 23 985 1006 984 1006 0.97
7 9 0.0081 4 10.4 1.1 1 15 1012 1026 1012 1026 0.94
8 9 7.3e-07 0.00036 23.1 2.1 3 23 1229 1249 1227 1249 0.96
9 9 5.5e-08 2.7e-05 26.7 1.4 1 23 1255 1277 1255 1277 0.98

Sequence Information

Coding Sequence
ATGCATCATCATTTACTAATGAACCCCAAAGGAGAAGAAAATGACTCAGCTTCGGACGACGAGGAAAGTGGAGGAGGAGCCATCGGCGAAGAGGCCGTTGATCTTACGGCTACGCGTTCCCATCACGGTGATGAGGACGAAAAAGATCAGGAAGAATTACCAATGGAGGAGGACGAGGATGAAGGGGTTGTTGATGAGCAAGAGGAGCAGGACGAAGACGAGGAGGGTTCGCGCAAGCAAATGCGACATCGTCAGGatgcagaaaataataatagcTTCGTGGAGGGTGGCTCAGCTGCCGGAGTCTTTCCTCCCGCCGGTACTAGTCACGTCACACTTGGGGCTcttgaaaatacaaaagttgCAGTTGCCCAATTTGCAGCTTCGGCCTTGGCGGGTAGCGCGGACAGCGAAGCGGCCATGCAAGATTACGCCCTCTTGCAGAGTACCCTTTACACCCTTCAGCACCAACAGATGCTTCAAAAACGCGCTCAAGAGGTACTCGATAATGCAAGTCAAGGTCTGCTAGCGAACAATCTGGCAGATGAGCTCGCCTTCAGGGGTGGTAAAGGTTCGAGATTGTCTCCCTACGACTCGAAAACCGGTGGCAGCCGGGGCGAACCCTTCTTCAAACATCGATGTCGCTACTGCGGGAAGGTCTTTGGCAGCGACTCCGCCCTCCAGATCCACATACGGTCCCACACAGGTGAGCGTCCCTTTAAGTGCAACGTCTGCGGGAGCCGATTCACCACCAAAGGAAACTTGAAGGTCCACTTCCAAAGGCACACGGCCAAATTTCCGCATATTAAGATGAATCCCAATCCCGTTCCTGAACACCTCGATAAGTATCATCCTCCGCTCCTCCAGCAGCTCGCAGCATCCGGACAGAGACCCTTACCATCTCCACCACCTCCACCTCACCCGCATCACTCCCCTTTTCATCCCGCCGCAGCACATGGTTTTCTCCCCCCACAACCTCCCTTACCTCTTAGTCTAGCCATGCCCGGTATGTCGCCCCTTTATCGACCACCTCTCGTCAATCACCGAGACGATCAAGACGTCCCTGAGAACCTCAGCAAGCCTGTGACAACGGCACCTGCAATCTCCCCGCAATCACCTAACACCCACTCGAGTTCACATCATTCCTTTCTTGATCATCAACCACAAAAACAAATGCAGGACATAAAAGAAGATGTAAGGGATGAAATAAAGGTCGAGCAGTCAACGCAAGAGTCATTTCAGCTACAACCGTCCATGCAGGAGAAGGAGGAAGGCGAGGAATTCGACGAGGCGACTAGGAAATTTATGAACTCACCATCCTCGGCAAATCCTCCTTCCCACCCCCAACAGTACGAGGATTGTAGTATGGATAGCAAAATTAGTGGACGTCTAGAAGGAGACGTGGATATGGAAGCTGAGGAGGACATGGAGGAGCAACCTGAAAATCTCTCAAGTAGAGGACCTGGAATTCGTCTTTCGCAACAGCCAATTCCGTATCCTGGAGCCTCACCAGCAAGTAGCAGCGCTAGTAGTGGAAGTCTTCAGACATCCTTTTCTGGAATCATATTTCCTGGGCCACCAACCCACCACCAGTTACCTCACCATCCTTCGTCAACAACTGGAACGACTCCCACAGGCTCTGTCAACGATATGATCGTTGATCCTGCGAGAGATCCAGCTATTTACTCGAGCCTTCTACCCAGACCTGGTAGCAACGACAATTCTTGGGAAAGCTTAATAGAAATCACAAAATCCTCGGAGACGATGAAGTTGCAACAGTTGGTGGACAATATCGAACACAAGTTAACGGACCCGAACGAATGTGCGATTTGTCATCGAGTGCTATCCTGCAAAAGCGCTCTGCAGATGCACTACAGAACGCACACAGGTGAACGACCTTTCAAATGCAAAATCTGCGGAAGGGCCTTCACCACGAAAGGGAATCTCAAGACTCACATGGGAGTCCATCGGGCGAAGCCACCTCTACGAGTCCTGCATCAGTGTCCTGTTTGTCACAAGAAGTTCACCAATGCTTTAGTTCTTCAACAACACATACGACTGCACACGGGCGAGCCTACGGATCTTACTCCAGAGCAGATCCAAGCTGCAGAAGTGAACGAGTATCCAGGTTACCCTCACAATCCTCTTAACTCATTTCTTCCACAAGGATTTCCACCTCTTCACCCTGGTGGTCCGGGTTTCTCTCTAGCCTTTCCACCATCTCGTCATTCACTAGAAAGGCAATCCCTGGAGAGTGAAGCTGATATGAAAGAACATCAACACCATCAACTTCAATTTCAGCAGCAGCAACACAGATACATGGAAGAACATGGTGAAGACATGGAGGACCAGGATGAAGATGAGGAGGATCAGAGAGAAGAAGACGAGAGGTGTGACGAAGCTCATGAAAGACAAATTGCCGAGGAGGAGGAAGAACTAGAGCAAGAGCCCGAGGAACCTGAACATAAAGAAATACCTATCATTCCTTCCTTCTCAACATCCCTAGCAGCGCTTGAAAACCAAGTCAGAACGATCACGACGATGGCTCAGGGACATATGAACTCTGTCAGGTCGCCTCCTCTTCATCGGTACAATGGCAGCGAGAAGAGTCACAGTCCACCTAGTGCAGGGGCACCTTTGGACTTGACACCAAGAGCTTGCTCGACACCAGCATCCGTAGCTTCCGCTTCGACACCACCGCCTCAAACTACACCACACCACCCCCATCCATTCGGCATGTTTGCAGGACTATTACAGGCGGTGTCTTCATCGCCATCTGTGAATACGATGGGCACGAGCATAAATAGCGTTTCGCCGATGAACGCAGTCAGTCCTGGCAGTGCTGGCGGCGGACCTTTAGCCTCGTTAACAACATCAGCCGTTTTGGCAGCAACCTCGACTTACAATCCGCTTGGCCTAGCTGTCGGAGGCCCAGCAGTACGTGGCAACACTACGTGTAATATCTGCTACAAGACATTTGCGTGTAACTCTGCATTGGAAATTCATTACCGGAGCCACACGAAGGAACGACCTTTCAAGTGCACCATCTGCGATCGAGGATTTTCCACTAAGAGTGACGGCACAGTGGTAGAATCGTGCTCATGTGCTGAGCGGGGAAACGGATTACCCGCAAGAAGTTCTACTACCGTTAGATCAGATCTTCCATACCAGTCGTTATCAGCTCGACCACCATCGATAGTATCGACGGAATCTCAGGAGAAGCCAAAACGCAGGAGACGGCGGCCCGAGGATCGTAAGAATCGGGGGCGGACTGGTACTGGAGGGGGGCGGGGACTGACGTCTACCTATGCTGCAATCTATGGGGACGTACGCCTGCCCCCACTGCTGCCCCCCGCCCTCGGACTTCTAACCTCGGACCCCGTATTCCTGGGCAACATGAAGCAGCACATGCTAACTCACAAGATCCGGGACATGCCTCCTCATCTCTTCAGCGACTCTAAGCCGCCTACTCAACAGCATCAGCAACATACCCCTGATCATGAAACCTCCAGGAGTCCAATGTGCACTGATGAGTCAAGTTTGCCTCCACCACCTCCACCGCCTCCACCTCCACCACCGATGCCACCAACATCAATGGAGTCTGCGATTCCAGTGAAGAGACCTCTATCCGAAAGCGAACTTGCAGCTCCCAAAAGGCCGCACAGCATGTCCAGCAAGCACTTGTGCCAGGTTTGCAATAAGAATTTCTCCTCGTCCTCGGCGCTCCAGATCCATATGAGAACACATACTGGTGACAAACCATTCCGGTGCACCGTCTGCCAGAAGGCCTTCACCACCAAGAGCAATCTCAAGGTTCATATGGGCACGCATATGTGGACCAACGGAACCTCTCGACGAGGTCGCCGAATGTCTCTGGATCTTCCTCCTCTACCCATCACGCCCAAGGATTCGGAGTTTCTGCAGCGACGGCCGGATCTCTTCTATCCTTACCTGCCCACGCCATTCCTTAATGGAGTTCAGCAGAAACTAAATGAGATCTCGGTCATTCAAGGTAACAACGGATTACCGGCCCATCCAGTCAATGCCAGCAAATATGCTGGAATCTTTGGGTCAGTATACGGTGGAAGCTTCCCTATGGAAAAACAGCCCATGACACCAACCAACGGTCCGATGAGCGACACCAAGTCTTCACTAGCTTCCGGCTCCATGTTATTCCAGACTCCTTCCCCGTCTCATTCCCCGGGGGCGCCGTCCTCTAACACCGGAAATCAAAACTCAGCGAGCATGCCCGCCTGGAGCGGCGAACCTTTGCAACATCACTACGAAAGAGATGCACCTTCAAGAACCGAGAGCAACGCGACTCCACCATCAGCGCGATTGCCGCCTCCACCTGCGCCGCGAGGAGAAGGCCTAGCTGCGTGA
Protein Sequence
MHHHLLMNPKGEENDSASDDEESGGGAIGEEAVDLTATRSHHGDEDEKDQEELPMEEDEDEGVVDEQEEQDEDEEGSRKQMRHRQDAENNNSFVEGGSAAGVFPPAGTSHVTLGALENTKVAVAQFAASALAGSADSEAAMQDYALLQSTLYTLQHQQMLQKRAQEVLDNASQGLLANNLADELAFRGGKGSRLSPYDSKTGGSRGEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHIKMNPNPVPEHLDKYHPPLLQQLAASGQRPLPSPPPPPHPHHSPFHPAAAHGFLPPQPPLPLSLAMPGMSPLYRPPLVNHRDDQDVPENLSKPVTTAPAISPQSPNTHSSSHHSFLDHQPQKQMQDIKEDVRDEIKVEQSTQESFQLQPSMQEKEEGEEFDEATRKFMNSPSSANPPSHPQQYEDCSMDSKISGRLEGDVDMEAEEDMEEQPENLSSRGPGIRLSQQPIPYPGASPASSSASSGSLQTSFSGIIFPGPPTHHQLPHHPSSTTGTTPTGSVNDMIVDPARDPAIYSSLLPRPGSNDNSWESLIEITKSSETMKLQQLVDNIEHKLTDPNECAICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLTPEQIQAAEVNEYPGYPHNPLNSFLPQGFPPLHPGGPGFSLAFPPSRHSLERQSLESEADMKEHQHHQLQFQQQQHRYMEEHGEDMEDQDEDEEDQREEDERCDEAHERQIAEEEEELEQEPEEPEHKEIPIIPSFSTSLAALENQVRTITTMAQGHMNSVRSPPLHRYNGSEKSHSPPSAGAPLDLTPRACSTPASVASASTPPPQTTPHHPHPFGMFAGLLQAVSSSPSVNTMGTSINSVSPMNAVSPGSAGGGPLASLTTSAVLAATSTYNPLGLAVGGPAVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCTICDRGFSTKSDGTVVESCSCAERGNGLPARSSTTVRSDLPYQSLSARPPSIVSTESQEKPKRRRRRPEDRKNRGRTGTGGGRGLTSTYAAIYGDVRLPPLLPPALGLLTSDPVFLGNMKQHMLTHKIRDMPPHLFSDSKPPTQQHQQHTPDHETSRSPMCTDESSLPPPPPPPPPPPPMPPTSMESAIPVKRPLSESELAAPKRPHSMSSKHLCQVCNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKSNLKVHMGTHMWTNGTSRRGRRMSLDLPPLPITPKDSEFLQRRPDLFYPYLPTPFLNGVQQKLNEISVIQGNNGLPAHPVNASKYAGIFGSVYGGSFPMEKQPMTPTNGPMSDTKSSLASGSMLFQTPSPSHSPGAPSSNTGNQNSASMPAWSGEPLQHHYERDAPSRTESNATPPSARLPPPPAPRGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00677000;
90% Identity
-
80% Identity
-