Basic Information

Insect: Amphibolips quercusostensackenii
Gene Symbol: Rab26
Assembly: GCA_032357855.1
Location: JAUELO010000007.1:3235984-3277663[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.1 1e+03 2.8 4.7 2 23 476 498 476 498 0.96

2 18 2.2 1.1e+03 2.7 1.1 3 23 548 569 547 569 0.91

3 18 0.0024 1.2 12.1 0.7 2 23 575 596 574 596 0.95

4 18 0.0045 2.2 11.2 1.5 1 23 625 647 625 647 0.97

5 18 0.0006 0.3 14.0 0.1 1 23 653 675 653 675 0.97

6 18 1.6e-07 8.1e-05 25.2 0.6 2 23 712 734 712 734 0.96

7 18 0.0036 1.8 11.5 0.2 3 23 742 763 740 763 0.96

8 18 2.9e-05 0.014 18.1 0.2 2 23 771 793 770 793 0.96

9 18 0.0027 1.3 11.9 0.4 1 23 802 824 802 824 0.93

10 18 0.36 1.8e+02 5.2 0.1 2 19 901 918 900 919 0.93

11 18 0.04 20 8.2 0.0 2 23 940 961 939 961 0.96

12 18 0.0084 4.1 10.4 1.2 1 23 977 999 977 999 0.97

13 18 0.00014 0.07 15.9 0.2 2 20 1017 1035 1017 1037 0.93

14 18 0.01 5.2 10.1 0.7 2 23 1067 1089 1066 1089 0.93

15 18 0.00018 0.088 15.6 0.4 2 23 1114 1136 1113 1136 0.92

16 18 0.0023 1.1 12.1 1.9 1 23 1142 1166 1142 1166 0.95

17 18 0.19 92 6.1 2.0 1 23 1171 1194 1171 1194 0.91

18 18 1.9 9.5e+02 2.9 0.5 2 23 1225 1247 1224 1247 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.1	1e+03	2.8	4.7	2	23	476	498	476	498	0.96
2	18	2.2	1.1e+03	2.7	1.1	3	23	548	569	547	569	0.91
3	18	0.0024	1.2	12.1	0.7	2	23	575	596	574	596	0.95
4	18	0.0045	2.2	11.2	1.5	1	23	625	647	625	647	0.97
5	18	0.0006	0.3	14.0	0.1	1	23	653	675	653	675	0.97
6	18	1.6e-07	8.1e-05	25.2	0.6	2	23	712	734	712	734	0.96
7	18	0.0036	1.8	11.5	0.2	3	23	742	763	740	763	0.96
8	18	2.9e-05	0.014	18.1	0.2	2	23	771	793	770	793	0.96
9	18	0.0027	1.3	11.9	0.4	1	23	802	824	802	824	0.93
10	18	0.36	1.8e+02	5.2	0.1	2	19	901	918	900	919	0.93
11	18	0.04	20	8.2	0.0	2	23	940	961	939	961	0.96
12	18	0.0084	4.1	10.4	1.2	1	23	977	999	977	999	0.97
13	18	0.00014	0.07	15.9	0.2	2	20	1017	1035	1017	1037	0.93
14	18	0.01	5.2	10.1	0.7	2	23	1067	1089	1066	1089	0.93
15	18	0.00018	0.088	15.6	0.4	2	23	1114	1136	1113	1136	0.92
16	18	0.0023	1.1	12.1	1.9	1	23	1142	1166	1142	1166	0.95
17	18	0.19	92	6.1	2.0	1	23	1171	1194	1171	1194	0.91
18	18	1.9	9.5e+02	2.9	0.5	2	23	1225	1247	1224	1247	0.93

Sequence Information

Coding Sequence: ATGGCTGGTGATGACAATGTAAATGACAATATTTTGCGTGTAGAAGAAGAggaattttatgaaaagaaaaatagtCCAAAggagggaaaaaaattaaatcaacctGCTGTAATCAATCAGTCTTTGCTGACACCTTCTCCTACTGGTTATCGGGATTATAAACCACCAGCAGAAGTGCTTACTGGGTATCATTCAACAATCCACAAAACGAAAACTGTTGTTTCCCCCAACAGGagcgcacaaaaaaataaaatcaaagaacaGGAATTTACACACAAGACAATATTGTTGGGGGACAGTGGAGTTGGAAAAACCTCGCTACTTGTTCAGTTCGATACGGGAAATTTTCAGCAAGGGAATTTTGCAGCGACTGTTGGTATCGGTTTTACGAATAAATTGGTGTCCGTGGACGGAAACCAAGTGAAACTTCAAATTTGGGATACGGCCGGACAAGAAAGATTCCGAAGTGTCACTCATGCCTACTATCGAGACGCACATGGTAATAAATGTGATTGTGGATCTCAGCGAGAAATTTCACGTGAGGAAGGCGAAAGATTAGCAAGAGAATATCAAGTGCCCTTCATGGAGACATCGGCAAAAACTGGAATTAACGTTGAACTTGCATTCCATGCTATTGCTAGGCACGCACAAAAGTGGGAAAAGAAGATCCCAACGAAATCAAGTTCAATGTACACGATTACGTTCGTCAACAATCATCTAATCAATCCAGCTCTTGCATCAATACCAGTTGCATCACAACCTGAAGATTCAGCGATGACAGATAAAGTCCCTGAGGAGACCTCACCGACAGAAGATCCCAGCGAAGAAATAGAAAAGCTTGTGGAAGATGAAACACCTGTGGAAATTGAAACACCTGTGGAAATGGAAACGCCTGCGGAAACGGAAACACCTGTGGAAATAGAAACACCTGTGGAACTTAAAGTTCCTGTTGTGGAAATTGAAACACCTGAAGAAATTGAATCTCCAGTGGAAATTGATACTCCTGCAGAAATTGATACTCCCGTGGAAATTGAAACTCCTGTGGAAGTTGAAACTCCTGTGGAAATTGAAACTCCTATGGAAGTCGATACAGAAGTCGAAGAAAGAGTCGAGCGTGAAACCAGAGGCAGTTCAAAGAGAAGGTTGTCCAAAGAGACTGGTAGTGAAGATAAACGACCAGGTGCTGTGTCGGTTAAAATCGAACCCCCAGATGATGAACCCCATGAAATTGTGGACATCGCCACTCCCACGGAGATGTTGCTCCGAAATCCCTTGGCTACGCCCGCCAACGGAAAAGAAGATCAGCCAGCAGAACCCGATTCGACCCAGAAAAGCGTACCATTATCATCACCGTCACTTcgaggaaagaaaaaagttcgTCGAGGTCCTCACACCCACTTCAGAGGAGCACGCATCTTCAAAAGAAAATGCCTACATTGCCAAATCAATCTCCATTCCAAAACATCGTACGCAAAACACATGGCTAGGTTTCACGGCGGTGCGAGCGTCACATCAGTTTCAAAAGCACCAAGTACGAGAGTTGAACCACCTGCGATTCCAGCAACTTCTAGAGCTAAGAGTATTCAGAACGAAATTTCTATTATTGACACGAGTGCTGATGTGGAGGAATTAATTGAAGACTGTGTCGATTGTGGAATGACGTTCCTTGTGTTTAGCAAATTTCACAGCCACGTTACGACCGAGCACAAAAAGAAGGAGTTGAAGTGTCCCAAGTGTGCTGCCAAATTCCGTTCTCCGAGTGATTACCTCGCCCATCACGAGTATCACCGAATGGGTAAGAAGGAACCAAACCGGAATTACAAAAGTCCAGAAGTAGAGGAAGTGCAAGAGAGTGTCCAGCAGAAGCGACGGTTCAATTGTACTCTCTGCAGTCTGCACTTCCCCTCGCGAGTCGAACTCACCGAACATCGTAATTTGCAcctgaaagttaaaatttactcGTGTGTGATTTGCCGCAGCATGTTTAGTAGCGCTGGAGCGTTGGAGATTCATATGAAAGATCATGGAATTGATGATCCAAAGGAGAGAACTGCCAACAGTTCTTGTATGGAATATGGGCAGGAGGAAGgtttaaatacttcaaagaacTCAAATACTCCATCCAGGAAGAACGAGTGTTTCGAATGTGGAAAGACATTTTCCAACTACGCGAATTTGCGAAGGCACATAAGAAACGCACACGAGGATGAGCGACGCATCGACTGTTCGGAGTGTATCAGAACTTTCAAAAGCAAGGAAGCCTACGAAGATCATCTCCGGAGCGCACACAATCCCGAAAAAACTGTCTTGCAGTGTCCTCAGTGTCCGAAAACGTTCGTCTTCCAAGCGAATTTGGATCTCCATCGTCGCAATGTGCACATCAACAAACCGGAACCGAGCAATCATGAGTGCGATGTGTGCGGTAAATCATTCCTGGAGGAGTCTTCTCTGAAAATCCATCGCGGGTGGCACAATCGCGCCAATTCGCGATTCAGCCTCGAAAACTATGAGAGAGATCAACTCTCGTTGCCGAATCCGACTAGTTCCAAACCAGCGAAGGCGAGAAAGTCTTTCCCGAATGTTCCTCTTCAACAGCAGTTGCAACTGCAACAGCAGCTCCAGCAAAAACAACTCCAGCAAAAACAGCTTCAGCAAAAACAACTCCAGCAAAAACAGCTCCAGCAACAATTACCCGAGCTTCAGTGTCAGGTGTGCGACGACAAATTCTTCGACGTCGCCGAACTGAGAAAACACGTCTGGGATGTTCACTGCGCTCGCGCAACCAAAGTCGAAAAACCATTCGTTGTCGGAGACCTTCAGTGTGAACTCTGCACCAACATCCTTCCTGATCAAGCAAGTCTCGAGGCTCACATGGAGTGGCACGAGCGCAACCCAATTTTGAGCAACAACTATGGAAATACCAATGCTTACCGGTGTGATGTTTGCGACAAGTATTACAGTTCACTCAAGATTCTCGCGAAGCATAAAAAGTTACACAAGCAGGTTGCACAGCCTCTGAGATTCCAGTCACTTCCAATAAAAAGGCCGTCTTGCAACGTTTGCGGCAGGTCCTTTACTGCCGAATCTTCGCTCAAAAGGCACAAGGCGATGTCACCAGAATGCCAGTCTTACTTCTCAGGAAGATTCACAGAAGAACCAAGAAATCCGGCAGATTCCATCTTTAAGAAAAAACCTGTAACCTGCCACATATGCAAGACTGTCTTCCCGAGTATGAGCGTTTTGTATCAGCACAAGCAGTTGGCACATAAAGTGGGTTTTAACAAAGACAGGAAATCACCCAGCAATGAATGCGTCCCATTGGCGAGTGGCGAAGGTGTTTCGTGCAATGTCTGCGGTAAGCAATTCCCCGGCCTCTCCAATCTCAAGCAGCACTTCACGATTAAGCACAAAAACGTTAGCCAGCATCCATGCACGATTGCGAATTGCAAAATGATCTTCTCCACGTCTCATGCCCTCAAAAATCATGAACTCACGCACTCAAACATGATCTACAGTTGCGGTCTCTGCGAAAGGCACTTTTTCCACAGAGGAGCGATCATCAAGCATGTGTTCAACGCTCACAAAATGATTTACCAAGCAACTGGAGACAAGGATTCTCTGTTTAAGGAAACCGATTTGAGTACGTATGTCGTGAAAGGTGCGACTGGAACTGTTTGTCCGCGATGCAGAGTCAAGTACCCAAATATTAAGGCAATGAAGATACACTACTTCAAATTCCACGAGACTTTCGCTTAA
Protein Sequence: MAGDDNVNDNILRVEEEEFYEKKNSPKEGKKLNQPAVINQSLLTPSPTGYRDYKPPAEVLTGYHSTIHKTKTVVSPNRSAQKNKIKEQEFTHKTILLGDSGVGKTSLLVQFDTGNFQQGNFAATVGIGFTNKLVSVDGNQVKLQIWDTAGQERFRSVTHAYYRDAHGNKCDCGSQREISREEGERLAREYQVPFMETSAKTGINVELAFHAIARHAQKWEKKIPTKSSSMYTITFVNNHLINPALASIPVASQPEDSAMTDKVPEETSPTEDPSEEIEKLVEDETPVEIETPVEMETPAETETPVEIETPVELKVPVVEIETPEEIESPVEIDTPAEIDTPVEIETPVEVETPVEIETPMEVDTEVEERVERETRGSSKRRLSKETGSEDKRPGAVSVKIEPPDDEPHEIVDIATPTEMLLRNPLATPANGKEDQPAEPDSTQKSVPLSSPSLRGKKKVRRGPHTHFRGARIFKRKCLHCQINLHSKTSYAKHMARFHGGASVTSVSKAPSTRVEPPAIPATSRAKSIQNEISIIDTSADVEELIEDCVDCGMTFLVFSKFHSHVTTEHKKKELKCPKCAAKFRSPSDYLAHHEYHRMGKKEPNRNYKSPEVEEVQESVQQKRRFNCTLCSLHFPSRVELTEHRNLHLKVKIYSCVICRSMFSSAGALEIHMKDHGIDDPKERTANSSCMEYGQEEGLNTSKNSNTPSRKNECFECGKTFSNYANLRRHIRNAHEDERRIDCSECIRTFKSKEAYEDHLRSAHNPEKTVLQCPQCPKTFVFQANLDLHRRNVHINKPEPSNHECDVCGKSFLEESSLKIHRGWHNRANSRFSLENYERDQLSLPNPTSSKPAKARKSFPNVPLQQQLQLQQQLQQKQLQQKQLQQKQLQQKQLQQQLPELQCQVCDDKFFDVAELRKHVWDVHCARATKVEKPFVVGDLQCELCTNILPDQASLEAHMEWHERNPILSNNYGNTNAYRCDVCDKYYSSLKILAKHKKLHKQVAQPLRFQSLPIKRPSCNVCGRSFTAESSLKRHKAMSPECQSYFSGRFTEEPRNPADSIFKKKPVTCHICKTVFPSMSVLYQHKQLAHKVGFNKDRKSPSNECVPLASGEGVSCNVCGKQFPGLSNLKQHFTIKHKNVSQHPCTIANCKMIFSTSHALKNHELTHSNMIYSCGLCERHFFHRGAIIKHVFNAHKMIYQATGDKDSLFKETDLSTYVVKGATGTVCPRCRVKYPNIKAMKIHYFKFHETFA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -