Basic Information

Insect: Amphibolips quercusostensackenii
Gene Symbol: ECU06_1150
Assembly: GCA_032357855.1
Location: JAUELO010000232.1:2359404-2381771[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0011 0.55 13.1 0.2 2 23 219 240 218 240 0.96

2 12 2.3e-05 0.011 18.4 1.2 1 23 246 268 246 268 0.98

3 12 3.5e-07 0.00018 24.1 0.9 1 23 274 297 274 297 0.96

4 12 0.00025 0.12 15.2 1.1 1 21 346 366 346 367 0.95

5 12 0.22 1.1e+02 5.9 0.6 1 23 398 421 398 421 0.88

6 12 0.00055 0.27 14.1 2.4 1 23 450 472 450 472 0.98

7 12 3.8e-05 0.019 17.8 1.7 1 23 478 501 478 501 0.97

8 12 6.2e-07 0.00031 23.4 0.4 1 23 507 529 507 529 0.98

9 12 1.3e-07 6.6e-05 25.5 0.6 1 23 535 557 535 557 0.99

10 12 2.2e-05 0.011 18.5 1.2 1 23 563 585 563 585 0.98

11 12 1.8e-05 0.0088 18.8 1.1 1 23 591 613 591 613 0.97

12 12 5.8e-05 0.029 17.1 3.3 2 23 620 642 619 642 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0011	0.55	13.1	0.2	2	23	219	240	218	240	0.96
2	12	2.3e-05	0.011	18.4	1.2	1	23	246	268	246	268	0.98
3	12	3.5e-07	0.00018	24.1	0.9	1	23	274	297	274	297	0.96
4	12	0.00025	0.12	15.2	1.1	1	21	346	366	346	367	0.95
5	12	0.22	1.1e+02	5.9	0.6	1	23	398	421	398	421	0.88
6	12	0.00055	0.27	14.1	2.4	1	23	450	472	450	472	0.98
7	12	3.8e-05	0.019	17.8	1.7	1	23	478	501	478	501	0.97
8	12	6.2e-07	0.00031	23.4	0.4	1	23	507	529	507	529	0.98
9	12	1.3e-07	6.6e-05	25.5	0.6	1	23	535	557	535	557	0.99
10	12	2.2e-05	0.011	18.5	1.2	1	23	563	585	563	585	0.98
11	12	1.8e-05	0.0088	18.8	1.1	1	23	591	613	591	613	0.97
12	12	5.8e-05	0.029	17.1	3.3	2	23	620	642	619	642	0.94

Sequence Information

Coding Sequence: ATGCTAACTTCCTACGATGAAGATGAAGTAGCCGAAAAGGCTCATCCTGAAATCGAGGGAGAATATTTTCTAGTACCCGATATTCCTGAAGATGTCGAAGAAGACATTCAGGCCATCACTGATGAAGAAAGTCCATCGATATCTCAAATGTGCAGAATATGCGCTTCCGTAAAAgtaaCTAAAGACGACACTTTGCCTCTGCAATTATGTTATCACTGTGCCGCTACTTTGCTCGCCTGGGACGAACTTTCCGATGGTTGTTTAAAAgctcaaaataaacttttactactTCAGGAACAACAAAGGCGTGCACAGATTGAAGCAGAAAAACTTCAGGTTCTGGAAGAAGCTGTGAAAGTTGGTGAAAAATCTGTCgagGAGAACAATGAACCTAAATTCGTGAATGTACAAACCGCTGGAAGCTCATATACAGAAAgGTCCAGTAGAGCCCAGACATCATTTAAAGTATTCCTTGATACGCAAAGTATACTTTGGAGGAAAAGGAAAATCACGGACAAATCGATTTTAAATCCCCCAATTTGCGAAGAGTCAGGAGACGCGAAAGGTGAATTGAAACATGAAGATCAAGGCGAAGAAACGGAATTTCAAAGCGGTTGGGAACTTACTAACAGCGGTGATGAGGAGTTTCCATGGAAATGTACAAATTGCGAGCAGAAATTTGAGTCTGCGGTTGAGTTAAATGATCACGCAAAACTTCACAACTCCAAGAAATCTTACAGATGTCGAGAATGCGGAAGGGGCTTCAAACTCAAGGATTCCTACATCCGACACAGTCGAATTCACAATGATGAACGGCCTTATACTTGTCACGTTTGTGGAAAACAATTTCGAGATTCTGGAGGACTTTCTCGTCACTTGAGGGATGTTCACGCTAAAAGGACTTttacgcgGTGCAGCGCGCCGAGGACATCTTTCGCGACCTACTGTTCCATTAAGCCTAGAAGCCCTAAATCCCAAGAGTCACTAAATGTTGAACTTCAGGATTCAACTCCGATCTCAACAGTTTCCCAAGAATATTCCTGTGAAAACTGTCGTTTGACTTTCAAACGAAAAACCCTTCTGAAGTATCATATCCTCAACTGTTCCTTTAATACTCACATTGAAATGGAAGAAAGCCAAGGGAAGGAAAATCAATCTTCCAATCGGCGCAGAAGAAAGCGTCAGAAATCGTATCCTTGCATGCACTGCGATTACGAAACCAAGAGGAAAAAGATCCTAGATGCTCACACATTAGAAGCTCATCCAGAGTTGATACCGAATAATAAAAGAAGCATCGATAAAGAAGCGGTTGACCAAGCAAAAATGGAAGTTGATGGGAAAATCTACTACCACTGCACCGAGTGCGGTAAAAATCTCTACTCTCCGTACACTTTTTCCTGGCACAAGCGAATCCACACTGGTGAAAGACCGTTCACCTGCCACCTGTGTGGGAAACAATTCCGAGTTAATCAGGGCTTGGGTCGTCACCTACGAGAAACTCATGCCAGGATCAAAAAATTCCCCTGCGACATTTGCGGGAGGATGTTTACTACGAAACGAAATGTTGAAGATCATCGACGAATCCACACAGGCGAGAGACCTTATGTCTGCAATGTTTGCGGAAAAGCCTTTAAACAAAAGGCCTCACTATTTGTCCACAATCGCACGCACTCGGATTTGTTTCCTTTTCAGTGTTCGTACTGCAACCAAGGATTTAGAACGAAAACCCCGCTGATGGTTCACATTACAAAGCACACTGGCGAAAAACCGTACGCTTGTGACATCTGCAATCGACGTTTTCGAATCAAATTTGAGTTGAAGAGACATCGACTTGTTCACTCGGATGAAAAACCCTGGCGATGCAGTGACTGCGACCAGTGTTTTAGACAAAAGAGGTATCTTGTTAATCACAGGAAAGCTAATCACGTTGCAATTGCGAAAGAGTAA
Protein Sequence: MLTSYDEDEVAEKAHPEIEGEYFLVPDIPEDVEEDIQAITDEESPSISQMCRICASVKVTKDDTLPLQLCYHCAATLLAWDELSDGCLKAQNKLLLLQEQQRRAQIEAEKLQVLEEAVKVGEKSVEENNEPKFVNVQTAGSSYTERSSRAQTSFKVFLDTQSILWRKRKITDKSILNPPICEESGDAKGELKHEDQGEETEFQSGWELTNSGDEEFPWKCTNCEQKFESAVELNDHAKLHNSKKSYRCRECGRGFKLKDSYIRHSRIHNDERPYTCHVCGKQFRDSGGLSRHLRDVHAKRTFTRCSAPRTSFATYCSIKPRSPKSQESLNVELQDSTPISTVSQEYSCENCRLTFKRKTLLKYHILNCSFNTHIEMEESQGKENQSSNRRRRKRQKSYPCMHCDYETKRKKILDAHTLEAHPELIPNNKRSIDKEAVDQAKMEVDGKIYYHCTECGKNLYSPYTFSWHKRIHTGERPFTCHLCGKQFRVNQGLGRHLRETHARIKKFPCDICGRMFTTKRNVEDHRRIHTGERPYVCNVCGKAFKQKASLFVHNRTHSDLFPFQCSYCNQGFRTKTPLMVHITKHTGEKPYACDICNRRFRIKFELKRHRLVHSDEKPWRCSDCDQCFRQKRYLVNHRKANHVAIAKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -