Aque025493.1
Basic Information
- Gene Symbol
- CDC5L
- Assembly
- GCA_032357855.1
- Location
- JAUELO010000332.1:1034224-1048730[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-16 6.3e-13 51.0 1.5 2 46 9 54 8 54 0.97 2 2 0.00015 0.89 12.1 0.0 19 45 60 85 58 86 0.86
Sequence Information
- Coding Sequence
- ATGCCGCGAATAATGATAAAGGGTGGTGTTTGGCGGAACACGGAGGATGAAATCTTGAAAGCAGCTGTGATGAAATATGGCAAAAACCAATGGAGTCGGATAGCGTCTTTGCTTCACCGAAAATCTGCAAAACAGTGCAAAGCAAGATGGTTCGAATGGTTAGATCCTACAAAGCTAATGCCAACACAATGGAGGACCATCGCTCCAATTATCGGAAGAACTGCCGCACAGTGCCTGGAAAGATATGAGTATTTACTCGATCAAGCTCAAAGAAAAGAAGAAGGCGAAGATGCTTCAGACGATCCCCGAAAACTCAAGCCAGGCGAAATCGATCCGAATCCAGAAACGAAACCAGCTCGACCGGATCCTAAAGATATGGACGAGGATGAACTCGAGATGCTATCGGAAGCAAGAGCCAGATTAGCTAATACTCAAGGGAAAAAGGCGAAACGTAAAGCCCGCGAGAAGCAGTTGGAAGAGGCAAGAAGGCTTGCTGCTTTACAAAAACGCAGGGAATTGAGAGCAGCTGGAATCAccgttaatcaaaaaaataagagaaaaagggAGTTGAATTACAACACTGAAATTCCTTTTGAAAAGAAACCCGCGGCGGGGTTTTATGACACTTCAACTGAACACGTGGATCCATTAGCTGCTGATTTTTCGAGACTAAGGCAACAACATTTAGATGGAGAATCGAGACAGGATGCTGAAATGATGGAAAGACGAAAAGACAAGCAGAAACTCAAACAGCGAAAAGAAAATGACATGCCGATGGGGATGTTAAATAACGAGGAGCCTATAAAGAAACGCAGTAAATTGGTTTTGCCGGAGCCACAAATCTCTGATAATGAGTTGCAGCAAGTTGTAAAACTTGGTCGCGCGTCGGAGGTGGCTCGTGAAATCGTATCTGAAGGAGATGCAACTGATAGTTTACTAGCTGATTACTCCCTAACCCCAAATACTGCTGTAACTCCGAGGACACCAGCTGTTCAAGACAGAGTGCTTGCAGAAGCTCAGAATGTCATGGCCTTGCTAAATGTGGACACTCCCCTCAAAGgAGGCTTAAATACGCCACTTATCAATTCCGACTTCACTGGAGTTGTCCCTTCTTCAAATGCTGTCGTAACGCCGAACACGATACTTGCGACACCATTCCGATCACAAAGAAGCGATGGGACGCCAATTGCCTCTTTTAATACTCCAGGATCTGTCCGGACCCAGAACGGTGTTCTAGCACCGACTCCCATTCGAGACAAGCTCAACATAAATTCCGAAGATGCCTTGGAAGGATCAGAAACGCCTGCTCTTAAGAAACAGgtaaaggAACAGTTGTGGGCAGGTCTCAGGACATTGCCAACACCGCGGAATGACTATGAAATAGTCGTCCCTGAAGAAGAAACCGATGAAAGTAGCATGGTCTCTGCAAATGATGTCGTTGAAGATCAAGCTGACATTGATGCCCGAAAGCAGCAGGAAATTCTTGAACAACgAAAAAGAGAACTCTCTCGACGTTCTCAGGTCATACAGAGGGATTTACCTCGGCCAGTCGAGGTGAATACTAATATCTTACGACCAATCGATTCTTCATTAAACGACCTACAAAGGGCTGAAGAGCTCATTAAGAAAGAAATGGTAACAATGATGCAGTTTGATGCTCTTCAAAATCCGATGCCTACAAATAAGAGATCAAATAACGCCCAGGCACAAGCGCAGTCATTTTTAAATGCTCATCCTTATGCCGACTTTGAAAAAGAGGAATTGGGACATGCAAAAAAGTTGATTGAGAATGAAATGAATGTTGTTCGTAAAGGTATGGATCACGGAGACATCAGTTTAGAGGCCTACTCCACAGTTTGGGACGAATGTTTGTCACAGATTTTATATCTTGAGCCGCAAAAGCGATACACGCGAGCGACACTCGTCTCGAAAAAGGATAGGATCGAAGCCTGTGAAAGGAAGTTGGAAGAAAATCGAATGCTCATGACCGGTGAAGCCAAACGGGCTGCGAAGatggaaaagaaattaaaaattttgactggAGGATATCAGggTCGCGCACAAGCCTTATCAAAACAGTTCAACGACACATGGACTCAAATTGAACAGCTGAGGCTTGAATTATCGACCTTCAAATTTCTCAAGGCACAAGAAGAAGCCGCTTTGCCCAGGAGAATCAATGCACTAGTTGAGGACGTCAACCGTCAAAAGGAACGAGAAAAACATTTACAAGCCAAGTATTCGAATTTGCAAGAGCTATTGCGTGAAAAAATGACTCAAAGGGAAGATCCTGTTCCTGAAAGAATGGAAGAGATGTACGATGCTAATACTAATGTTTAA
- Protein Sequence
- MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPTKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQRKEEGEDASDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGITVNQKNKRKRELNYNTEIPFEKKPAAGFYDTSTEHVDPLAADFSRLRQQHLDGESRQDAEMMERRKDKQKLKQRKENDMPMGMLNNEEPIKKRSKLVLPEPQISDNELQQVVKLGRASEVAREIVSEGDATDSLLADYSLTPNTAVTPRTPAVQDRVLAEAQNVMALLNVDTPLKGGLNTPLINSDFTGVVPSSNAVVTPNTILATPFRSQRSDGTPIASFNTPGSVRTQNGVLAPTPIRDKLNINSEDALEGSETPALKKQVKEQLWAGLRTLPTPRNDYEIVVPEEETDESSMVSANDVVEDQADIDARKQQEILEQRKRELSRRSQVIQRDLPRPVEVNTNILRPIDSSLNDLQRAEELIKKEMVTMMQFDALQNPMPTNKRSNNAQAQAQSFLNAHPYADFEKEELGHAKKLIENEMNVVRKGMDHGDISLEAYSTVWDECLSQILYLEPQKRYTRATLVSKKDRIEACERKLEENRMLMTGEAKRAAKMEKKLKILTGGYQGRAQALSKQFNDTWTQIEQLRLELSTFKFLKAQEEAALPRRINALVEDVNRQKEREKHLQAKYSNLQELLREKMTQREDPVPERMEEMYDANTNV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00980051;
- 90% Identity
- iTF_00089484;
- 80% Identity
- -