Aque025230.1
Basic Information
- Gene Symbol
- snpc-4
- Assembly
- GCA_032357855.1
- Location
- JAUELO010000330.1:4829677-4847360[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 7.5e-07 0.0046 19.4 0.6 3 44 14 57 12 59 0.92 2 5 2.4e-11 1.5e-07 33.8 0.2 2 43 66 111 65 114 0.95 3 5 1.3e-14 7.6e-11 44.3 0.0 1 44 120 164 120 165 0.95 4 5 5.2e-11 3.2e-07 32.7 0.1 2 41 172 211 171 212 0.96 5 5 9.7 5.9e+04 -3.4 0.2 5 13 367 375 367 375 0.84
Sequence Information
- Coding Sequence
- ATGTGGAACGTGTTTTTGCATCCAGATATCAATAAGTTTAAGTGGAAAAAGAAAGAACTCTCGGATTTGCATACTCTTGCGAAGAATTACAAGTATCAAAATTGGGACGAGATTGCCAAGGAATTGGGTACTCAAAGAAGCGGCTATCAATGCTTCGTAAAATACAACACGACCAAAAAGACGCAGATAAATGAAAGACCCTGGGGAAAAAAGGAAGACGCAAAGCTCGTGCACcttgtaaacaaattcaaaatcgGCGACTTCATAAATTGGGGAGACATTGCAAGCTGCATGGAAAACCGAACCAAACAGCAAATCTACTTCCGCTGGATGTACAGTCTCGCACCTCATCTAAAAAAGGGAAGATTCACTAACGAGGAAGACAAGCTCCTGATAGACGCCATTGAAAAGTACGGacccaatttcaaaaaaatatccgCCCTCGTCTTACCAACCAGGACTTCCGCACAGCTCAGCGATCACTACAACACAATTTCTTCCAACAAGGGAGAAAACGTCTGGACCATCCAACAAGACTCAAAACTTCTCTCATTGTACGCTGAACACGGAAACGACTGGTCCAAGATAGCAAGTCTCTTTGTCAACAAAGACAGAGTTCAACTTCGTCATCGGCATTCTGCACTCGTTCGATACAAAAAAAGAGGGATGTCGCTTGATGACATCCCGCGTGATAATTCTAGACAAAAACCCTTTAATAAGAGTATCGTCTTTCAAAAAATACCGAGAAACAATACTCAAAGTCTATTCCAACTTCAGGGACTCGATGATGTGGACAGAGAAATAATCGACTATTTTCACAAAGTCAATACTCCCGCTTCCAGAGCCGGTCGCAGACAGAAGTTTTATCATGAAAATGAACTTCAATCCCTCACTAGGAAAATGCACAACATTCTTCAATTTCTAAATGCCAAACTGAATATTCCCTATGATTTAGATGCTTACGATTCTCTCTCTGAGAAAGATAAACAGCTTTTGCATTCGCTGAAGAATCTTTCTCATGATGCAGCTCATGGGGCACCTTCTAGGAAAGCGGAACAGGTGAGGATCGCTATGTTCGGATTTGGGGAACAGGAAGAAAGTGACGAAGAAGATGAGCACTTCATACCCCCTTTGCCGTTTGGCGTGCGcagaaaaaaagatagatttgaTCAAGTGATCAACTACAGCCCCGCCATCGACGACCGTTTTCTTGAAGATAGAGAAATGACCTTTTTAACGCCGTACAACATCATCGAGGTAATCGGCGAAGGTGTGAATCATTCATTTGACAAACTGGGTGAGCTGCTCGCGAGGCCAAACTACAAATCCGAAAAACAAATTGTGAACAGTATTTATGTATTGACGCCTCGTCAATTGGCGATAAGGAAATTGGCAAATCCAAAGCAAGTGGTGCGGAATTTTCCTTTGCCTAGTACCTCGAAGGCTACGAATTCAGATGTCACTATTTTAGGTACTTTTCGAAATCACTTTGTGTGTAAAGAATACGATGTAGATTCTATACCTACGATGAAACCAAATTATTGGACGTTGCTTGGTTATCAGCAAATTCACATTGCAATGAAACAAATGAATCCGGAGAATAATGTAATCGATTGTTCGGAATTTGGGAGTAAAATTCGAGAGAAGGGAAGAATAGCTTTAGAAACACTTAGGATGCGTTTAGTGCAATTATTTAAGTACCCTCTTATTATGTCACAAGAAAATTATACTTTGGGAGTACTGGCGATTCAGTTCTAG
- Protein Sequence
- MWNVFLHPDINKFKWKKKELSDLHTLAKNYKYQNWDEIAKELGTQRSGYQCFVKYNTTKKTQINERPWGKKEDAKLVHLVNKFKIGDFINWGDIASCMENRTKQQIYFRWMYSLAPHLKKGRFTNEEDKLLIDAIEKYGPNFKKISALVLPTRTSAQLSDHYNTISSNKGENVWTIQQDSKLLSLYAEHGNDWSKIASLFVNKDRVQLRHRHSALVRYKKRGMSLDDIPRDNSRQKPFNKSIVFQKIPRNNTQSLFQLQGLDDVDREIIDYFHKVNTPASRAGRRQKFYHENELQSLTRKMHNILQFLNAKLNIPYDLDAYDSLSEKDKQLLHSLKNLSHDAAHGAPSRKAEQVRIAMFGFGEQEESDEEDEHFIPPLPFGVRRKKDRFDQVINYSPAIDDRFLEDREMTFLTPYNIIEVIGEGVNHSFDKLGELLARPNYKSEKQIVNSIYVLTPRQLAIRKLANPKQVVRNFPLPSTSKATNSDVTILGTFRNHFVCKEYDVDSIPTMKPNYWTLLGYQQIHIAMKQMNPENNVIDCSEFGSKIREKGRIALETLRMRLVQLFKYPLIMSQENYTLGVLAIQF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -