Aque020246.1
Basic Information
- Gene Symbol
- kn_1
- Assembly
- GCA_032357855.1
- Location
- JAUELO010000280.1:3810691-3834648[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.3e-142 7.1e-137 459.6 0.0 182 444 118 380 101 389 0.93 2 2 0.00034 34 5.0 1.1 515 563 366 414 339 426 0.56
Sequence Information
- Coding Sequence
- ATGGGCGGAGTCACTGCTAATCCCCAGAGTCAAAATGGAAGTCTCGAGAGACTGGCGGCCGATCAAGTGTTGTCTAAGGGCCTAGGGGGGAATCTTAAAAATCCAAAGGATCCGAGTTCGGATCTCTTAATGAAAAACGTGGGCAAGACCGAACAGAGACGTAATCAAAGGCGCTGCCGAAATAAGGAATTCGAGGAACATCATTTGACGATTATTGTATTACTTAGTCATAGATGCGACAGGAAGAAGAAGAAGCGTACGAAAGAGATAAGCGTAAGTAAGAGACACTATTATACGCTGcaaaagagagaagaaaaaggaTTGAAAGAGACAAGCATCCGTAGGAGACACTCGTTCTTCCTCAAGTTCTTCCTCAAGTGCAACCAGAACTGTCTTAAGAACGCTGGGAATCCACGGGACATGAGACGTTTCCAGgTTGTCATATCTACCCAAGTTGGAGTAGAGGGTCCCCTATTGGCTGTTTCTGACAATATGTTTGTGCACAATAACAGCAAACATGGACGCAGGGCGAAGAGGCTGGATCCGAGTGATCCGGGCGAATATAACAgtcttTATCCACCCATTCCTGTCGCCACCCCTTGCATAAAAGCTATATCACCTAGCGAAGGGTGGACTCAGGGCGGTTCTACAGTGATAATAATCGGGGACAACTTCTTCGATGGATTGCAAGTTGTATTCGGAACTATGCTAGTGTGGAGTGAGTTGATAACGGCACACGCAATCAGAGTACAGACCCCTCCGCGACAGATACCTGGTGTTGTTGAAGTAACACTATCCTACAAAAGTAAACAATTCTGCAAAGGATCTCCAGGAAGATTCGTCTATGTCTcgcTGAACGAGCCGACAATCGACTATGGCTTTCAAAGGTTACAGAAGTTAATTCCTCGACATCCTGGCGATCCGGAAAAGCTGCCGAAAGAGATTATTCTGAAAAGGGCGGCTGACCTCGCTGAAGCGCTTTATAGTATGCCTAGAGGCGGAAATTCTAGTATCTCGGGAGCACCAAGGAGTCCAGGTTCAGGTCATCCAGCAGCACCCCCTACATCTAGTTCAGCCACAGCTTTTAACTCCTATACGGGCCAATTGGCAGTCACTGTCCAGGAAAATGGCAGCGCAGCCAAATGGACGGATGCGCACGAACAATATGGCATTTTCTATACGTCCGGGGACGGAAGTGCGTTCGCTCCCGTAGTTCGACCACCGACCACCTCAGTCCCACCGCACTGGTCCACACAGCACCACCTCGCCACAGCTGCCCAGTAA
- Protein Sequence
- MGGVTANPQSQNGSLERLAADQVLSKGLGGNLKNPKDPSSDLLMKNVGKTEQRRNQRRCRNKEFEEHHLTIIVLLSHRCDRKKKKRTKEISVSKRHYYTLQKREEKGLKETSIRRRHSFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVGVEGPLLAVSDNMFVHNNSKHGRRAKRLDPSDPGEYNSLYPPIPVATPCIKAISPSEGWTQGGSTVIIIGDNFFDGLQVVFGTMLVWSELITAHAIRVQTPPRQIPGVVEVTLSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRGGNSSISGAPRSPGSGHPAAPPTSSSATAFNSYTGQLAVTVQENGSAAKWTDAHEQYGIFYTSGDGSAFAPVVRPPTTSVPPHWSTQHHLATAAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -