Basic Information

Gene Symbol
Arid4b
Assembly
GCA_032357855.1
Location
JAUELO010000347.1:830053-846275[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9e-28 2.2e-23 84.8 0.1 1 89 227 314 227 314 0.94

Sequence Information

Coding Sequence
ATGAAAATCTACGAATTAAATACTGTGACATACAAAACGGCTGCAGCACCTTATTTACCTACGCGCTGCCTTCGGCAGCTTGGAGAGGAAGATAAGGAACAATATTCAACTGCGAGTAGGGTCATAATTCCTGATTTCCATGTGAATGATCTTTCGACAGGTGCAGACTCTCTCGACAAAGCACGAATGCTTAAGGATGAGCTCACAGATGACAGCAGCGAAGATGAAGACAGTCCACCGCATGGTTCCCACGAGTCCCCTCGAGGAGAAGGAAAAGAAGGCTTGGAAATCGAACCAGAAATCGGAAGAGTCGTCTGCGTGGAACTCggcgataaaaagaaaaaagacaattGGTTTCCAGGACTGGTGGTCGCACCAACGGCTCAAGATACCGTGAGAATTAGAGTCAAAGACGACTACTTAGTTCGTTCCTTTAAAGATGCGAGATACTACACCGTCCCTAAAAAGGAAGCTACCGAATTCACGAAAGATTTGGTAAACAAGGTAGAAAATAGCGCTCTGAAGGTTGCCGTCGAAAAAGCGATGCTTTTTCTCGAAAAGAATGAGTTACCTCCCCATTGGGACAAGGATTCCCTCTTTGGGAATTCTGTCTCTAGTGGAAATAGTGATTCTGACGGAGACATTGATTCCGATAGTTCGGACGATGAGCCGCGAGAGGAAAAAGATCACTTTGTTGCCCAGCTTTATAAATTCATGGACGATCGAGGCACACCGATTAACAATTGTCCCATGATTGGAGAAGAGGATATTGATCTCTACAGGCTTTTCCGAGCTGTTTACAAACTCGGGGGCTACAACAGAGTCACGAATCAAAATCAATGGAAGATCATCACTCGACGTTTGAGTTTTTCGATGCAAAGTAATTCAGCGACCCACAATCTCGTGAAGCAGTCTTATAAAAAGTTCTTACATTCCTTTGAagatttttatagaaagttaGGATGTACTATGGTGAATCATCCGAGAGGGAGTGTTAGAAAGCAGCGACCTGGTCGGAGTTTGATAAGGGATAAGGATCGAAATACTCCTGTTCCTCAAGTTAAGTCTGAAAAAGAGGAagaggagaaggagaagaaggtcgaggaggagaaaaaggaaaagcgagagattaaaaaagaagttaaggaaGTGAAAGAGGAGGAACCGGCGAAGCCAGtgaggaagaaagaaaaagagaaggaaaaagaaaaggcactagaaaaggagaaagagagagagaaggagcgcgagaaagaaaaagagagggaaagagaaaaggagagggaaaaggagaaggagagggagaaagaaaaggaaaaagagaaagaacgagagagggagaaagaaaaggaaaaagagaaggaagaatCGGAAAGTCTAAGTGGACAAGAAAGTGATGTTAACGTCGAAGAAGAGGAATCTTCAAGTAGCGAAAATTCTAAAAAGACATCAAGGTATTCTGTTTTGAATAGAACGAAACCAAAAGAGGAGAAGAAATCTAAAGAGGAGAAGAAGAAGGTTCTCGAAAAGAGGAAAGTGGAGAAGAAGCAGGAGAAAAAGGACGAAAAGCCAGACAAGAAAGAAGAAGATACTACAAAGACCCGGTCCAAATCCAAAGATGATGCGACCAAACTTAAGCTAAATGTTGACGTTAGAGAGACGAGAACGCCCTCGAGAGAACCAGAAAAGAAAGCTTTTCCAAAACAACGACGCTTGACAGAGGAAGAAATGAAAAAGAGAGGTCGGAAACGAAAAGATACAGATGGTGAGAAATCGCGAGTGGAGGAACAATCAGTGGATTACGCGCCTTCTTATAAAGGTCCTGTCGAATTAGGGGACAGGCTCAAAGTTTATTATGGACCAAATCACGAGTCGAAGGTCACCTATGAGGCGAAGGTCATTGATATGGAAAAGGACGGCACCGAACCAAGCTACCTTGTTCACTACACTGGCTGGAATACGAGATACGATGATGGAAAATCTATGAAGACTGGACCCCTGACTCCTGGATCTCAGACTCGCAGAAGAGCTCAAAGCGTCGCACCCTCGGCAGGAACTCCATccttaatgaaagaaaaaaaagaagataaggaAAAGGATAAGGAAGGATCGATTAGATCAACAACTCCACTTCTTGGTGCGAGAACAAAAAGTCCGGCTACTCCAGCAACTGGGAGGTTGAGTAGAGCGACGAGAAATGCAGAGAGTGGAATTGAATTGAGGAGACGGACGAGGAGAATGTCAGGTCATACGGATGTTGCAGCAGCTTCTGAGAGTGAGGAGACGGATTCTTATGAGTCTGATGCTACTGAGCCTGAGCCTGAGCAGAGAGGAATATCTAAGGAGAAAGAGGAAGTAAATCGAAGAGAGGCAAAACGAAGGGCTGAGACGAAGATTAAATTGGAGGCGAGTGAAGGTGAGGATGAGAAAGAGGCTGTGGAGGAACCAAGGAGAGGAAAAAGGTTGAGGAGAAACTTGGGAAAGATTCTTCCGGAGATTAAATCTGAGCCTGAGAGCGATGAGGAACAACCGAAAGGTAGAGATTTTGACTTAAATCAGATTAGGTCTGAGTTAAAGGGATTTGATAAGGCTGTAAAACTGGAAATGTTGAGGGTTGAACCCGAACCGGAGGAGTTTAAACCTGTGGAGGTCAAACCTGTGGAGAAGGTTAAACCTGTGGAGAAGGTTAAACCTGTGGAGAAGGTTAAACCTGTGGAGAAGGAATGTCCGGAGAAAATGATTGTGATGTCGCCAAAAGTGGAGAAAAAACTGGAGCCGGTCAAGGTGGAGCCAATCGTGGATGTCAAACCTCCGGTTGAGAACACGGAAGATATTTACGAGTTTAAGGAACCAGAGCCGTTTGAGTTTGAGGTAAGAAACAAGTCAGGTGACAAGGACAAACTGAAACGTCGTGTTTTCGAGGAGCCCGTCAAGAGTAGTCCCAAGAAAAAGCAAAAGCTGTCTCTATCTCCAAGGGAAACAAAACCAGAAGTCGAGAGTGTTTCCACCAGCAGACCTTTGCTTCAATCCTCCTGGAAGTGTGAGGAAGCCTTCGACAAACTCTGTGAGAGTCCCGCGTACAATCAGCCGAAACCGCCGCAAGTCGAGGATTCAAGTAGGCACACTACTAGCATAGATCTCCTTTTCACTGATTTACCAGACGACGATGGTGCCGACGACCCAGAGGATCGCCTTATCATATCAGAAACAGAGACTCCTGAATCCGAGCAAGAGAATATATTCTCCTATCAACAAGACATATTTCCACCCAATGATGTGGATATGGATTTCAAGGATGAAAAGCCCAAAATGCAGATTCAGGTAGAAGAACCACCTCCCTCTCCAGTCATAGAAACTAGACCCATTCCTATAGAGCCAAAGCCAACTCTTAGTTTGATAAAACCAACTCCAACTCCCAAGATTATTGAACCAAAACTTCCAGAGACAAAACCTCTTGATTTCCCTCCTCTTTTGCCTCCTGCACCGACTGTTCCTGTGCCTATCAGCGCAAGACTTCCGGTGACTTCTTCCATAGAAGAAAAGTTATCAGCCGCTGCAGCATTTAGGAACAAAGTCAAGGAGACCAAAAAGGACGATGATGGGGAAAGTTCGAAGAAATTAGGACACTTTAAAGAAAAGGAAACGAGAAAAGAACTCGCCTCTTTAAGGAGAAACAAAGAAGAAACTAAAGCGAAGATTGAAGCAGAATCCAAGAAGATTTCCGAGGAACCAGTTACGAAACCAATCATAAAACCAGATGcagaggttttggaagaaaaagcaaGATCTCCGCTTATTGTCACGAAGGTAAAGGATGAagtgaaaaaaatagagaaaagaattgagattgaaaatgcatctcaaAAACTTGATCTTAGAAAGTTCACGGAGCAGAAGCCACAGGAGAGACTAGAAGATCTGTGGAAGAAGACCGAAGAGAAGATATTTCAGGAAGAAGATCGGATGCCAGTTGATGTGGAGAAGCAGAAACCTGCAGTTAATCTAGAATTTGCTGATTCCACAGATAGCAGTGATTCAGAGCGAAGGTTGATTATCGATAATGAGGTCGAATTCAATGAGGACAAGCCctataaatttgaagttaaattgAACTTGGAGAAAGATTTGATAGTTAAGCCGAACCTGGAGAGAGATTCGGTTTTTAAAACGCAggagaaaagtttaattaaactgAACCAGGAAAAAGCTTCCAATGTTAAATTGAATCAGGAGAGGACGACGATTAAACTAAACCAGGAAAGAGTTTCGGCTCTTAAAAACCTCGAAAAAAGTTCCCCTCTTAAAATAAACCCAGAGAAAGAAGAAATTCCGGGTTCGCCGACTCCAGGAATAGAGTCTGTCGAGCAGCAAGTGTCAGGACCTTCACACGCGATTCCAAAGGCGAAGATGGCAGATACTTCAGTAGTTTTGATGGAATTGCCATTCGCAAGTGCTCCAACTTCGAGTCCCACTGCTTGTAGTACAATTTCGACCTCGAGTATGCCTTTGCCCCAAAGTAGTAGTGCGATGGCTCCAGTTCCTCTGACGGTGCAGCATGTTCCAATTCCCTCGAGACAGGAACATCCGGCTCCGATACAAAGACAGGAAAGTAACGAAGCAGCTCCTGTGATGGATAACACGCCACCGACTACACCTGATTCGACTATATCGAATCTCTGCGAGTCTCCGAGGGATGCGGGAACTGCGGGTTCGAGTCCGATGTCGGAGGATAGTTCGAAGTTGAATAGAGATACTTCTGAAGTAGAGAATGATAGTAAAATGGCTGGATTGAGTGAGGATGAGGCATCATTGTTGAACTCGGAAGGGAATGGATCTGATAGACCTTTGAAGCAGTCGCTGAAGAGGTCGATGGAGGAATCGGGTTCGAAGAAGAGGAAAAGAAATAGGAGTCACGTTGAGAGTGGAGGGAATAAGTCGGGGAAAAAGNNNNNNNNNNNNNNNGGAAGAAGTAGCAGACATGGAGCCGGAAGTGATAGCGATGATACGAGTGAAGGGTCGAACCAATGTAGCAGCGGCAACTCGATTTCGACGGGTCATGGTCATGTCAATATGACGGAACTTAGTAGCTATTCATCAAGGTCACCAAGGCCTACAAAGTACAACTTCTATGTCGAATTAGGTGAGTAA
Protein Sequence
MKIYELNTVTYKTAAAPYLPTRCLRQLGEEDKEQYSTASRVIIPDFHVNDLSTGADSLDKARMLKDELTDDSSEDEDSPPHGSHESPRGEGKEGLEIEPEIGRVVCVELGDKKKKDNWFPGLVVAPTAQDTVRIRVKDDYLVRSFKDARYYTVPKKEATEFTKDLVNKVENSALKVAVEKAMLFLEKNELPPHWDKDSLFGNSVSSGNSDSDGDIDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINNCPMIGEEDIDLYRLFRAVYKLGGYNRVTNQNQWKIITRRLSFSMQSNSATHNLVKQSYKKFLHSFEDFYRKLGCTMVNHPRGSVRKQRPGRSLIRDKDRNTPVPQVKSEKEEEEKEKKVEEEKKEKREIKKEVKEVKEEEPAKPVRKKEKEKEKEKALEKEKEREKEREKEKEREREKEREKEKEREKEKEKEKEREREKEKEKEKEESESLSGQESDVNVEEEESSSSENSKKTSRYSVLNRTKPKEEKKSKEEKKKVLEKRKVEKKQEKKDEKPDKKEEDTTKTRSKSKDDATKLKLNVDVRETRTPSREPEKKAFPKQRRLTEEEMKKRGRKRKDTDGEKSRVEEQSVDYAPSYKGPVELGDRLKVYYGPNHESKVTYEAKVIDMEKDGTEPSYLVHYTGWNTRYDDGKSMKTGPLTPGSQTRRRAQSVAPSAGTPSLMKEKKEDKEKDKEGSIRSTTPLLGARTKSPATPATGRLSRATRNAESGIELRRRTRRMSGHTDVAAASESEETDSYESDATEPEPEQRGISKEKEEVNRREAKRRAETKIKLEASEGEDEKEAVEEPRRGKRLRRNLGKILPEIKSEPESDEEQPKGRDFDLNQIRSELKGFDKAVKLEMLRVEPEPEEFKPVEVKPVEKVKPVEKVKPVEKVKPVEKECPEKMIVMSPKVEKKLEPVKVEPIVDVKPPVENTEDIYEFKEPEPFEFEVRNKSGDKDKLKRRVFEEPVKSSPKKKQKLSLSPRETKPEVESVSTSRPLLQSSWKCEEAFDKLCESPAYNQPKPPQVEDSSRHTTSIDLLFTDLPDDDGADDPEDRLIISETETPESEQENIFSYQQDIFPPNDVDMDFKDEKPKMQIQVEEPPPSPVIETRPIPIEPKPTLSLIKPTPTPKIIEPKLPETKPLDFPPLLPPAPTVPVPISARLPVTSSIEEKLSAAAAFRNKVKETKKDDDGESSKKLGHFKEKETRKELASLRRNKEETKAKIEAESKKISEEPVTKPIIKPDAEVLEEKARSPLIVTKVKDEVKKIEKRIEIENASQKLDLRKFTEQKPQERLEDLWKKTEEKIFQEEDRMPVDVEKQKPAVNLEFADSTDSSDSERRLIIDNEVEFNEDKPYKFEVKLNLEKDLIVKPNLERDSVFKTQEKSLIKLNQEKASNVKLNQERTTIKLNQERVSALKNLEKSSPLKINPEKEEIPGSPTPGIESVEQQVSGPSHAIPKAKMADTSVVLMELPFASAPTSSPTACSTISTSSMPLPQSSSAMAPVPLTVQHVPIPSRQEHPAPIQRQESNEAAPVMDNTPPTTPDSTISNLCESPRDAGTAGSSPMSEDSSKLNRDTSEVENDSKMAGLSEDEASLLNSEGNGSDRPLKQSLKRSMEESGSKKRKRNRSHVESGGNKSGKKXXXXXGRSSRHGAGSDSDDTSEGSNQCSSGNSISTGHGHVNMTELSSYSSRSPRPTKYNFYVELGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00010868;
90% Identity
-
80% Identity
-