Ajug019404.10
Basic Information
- Insect
- Amorpha juglandis
- Gene Symbol
- Kdm5b
- Assembly
- GCA_949126905.1
- Location
- OX421389.1:694266-694750[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.00026 1.2 9.3 0.3 40 49 26 35 21 36 0.82 2 3 0.00026 1.2 9.3 0.3 40 49 65 74 60 75 0.82 3 3 0.00026 1.2 9.3 0.3 40 49 104 113 99 114 0.82
Sequence Information
- Coding Sequence
- ATGCTGCTGTGCGACGGGTGCGACGACTCGTACCACACGTTCTGCCTCGTGCCGCCGCTCGCCGACGTGCCCAAGGGAGACTGGCGGTGCCCGGTGTGTCTGGCTGAGGAGGAGCAGATGCTGCTGTGCGACGGGTGCGACGACTCGTACCACACGTTCTGCCTCGTGCCGCCGCTCGCCGACGTGCCCAAGGGAGACTGGCGGTGCCCGGTGTGTCTGGCTGAGGAGGAGCAGATGCTGCTGTGCGACGGGTGCGACGACTCGTACCACACGTTCTGCCTCGTGCCGCCGCTCGCCGACGTGCCCAAGGGAGACTGGCGGTGCCCGGTGTGTCTGGCTGAGGAGGTACGGAGTATGCACTAA
- Protein Sequence
- MLLCDGCDDSYHTFCLVPPLADVPKGDWRCPVCLAEEEQMLLCDGCDDSYHTFCLVPPLADVPKGDWRCPVCLAEEEQMLLCDGCDDSYHTFCLVPPLADVPKGDWRCPVCLAEEVRSMH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -