Ajug004439.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Amorpha juglandis
Gene Symbol
-
Assembly
GCA_949126905.1
Location
OX421369.1:6095233-6103149[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 7.4 4.7e+02 2.0 1.0 1 23 54 77 54 77 0.95
2 21 0.16 10 7.2 2.8 1 23 84 107 84 107 0.96
3 21 4.3 2.7e+02 2.7 4.3 1 23 190 212 190 212 0.97
4 21 0.003 0.19 12.7 1.2 2 23 218 239 217 239 0.97
5 21 4.1 2.6e+02 2.8 1.7 1 23 245 267 245 268 0.93
6 21 0.12 7.4 7.7 3.4 2 22 499 519 498 519 0.96
7 21 4 2.5e+02 2.8 1.0 1 23 614 636 614 636 0.82
8 21 0.61 39 5.4 0.3 2 23 772 793 771 793 0.96
9 21 0.0096 0.61 11.1 0.1 2 23 873 894 872 894 0.97
10 21 0.22 14 6.8 2.2 1 23 902 924 902 924 0.98
11 21 0.18 11 7.1 3.2 1 23 962 984 962 984 0.95
12 21 0.00028 0.018 15.9 4.0 1 23 992 1014 992 1014 0.99
13 21 0.28 18 6.5 2.6 1 23 1099 1121 1099 1121 0.98
14 21 0.19 12 7.0 0.4 1 20 1177 1196 1177 1199 0.90
15 21 0.018 1.1 10.2 0.4 1 23 1205 1227 1205 1227 0.98
16 21 0.013 0.83 10.6 2.0 1 23 1297 1319 1297 1319 0.95
17 21 0.017 1 10.3 1.1 1 23 1325 1347 1325 1347 0.96
18 21 0.0078 0.49 11.4 2.6 1 23 1437 1459 1437 1459 0.97
19 21 0.0002 0.012 16.4 1.4 1 23 1465 1487 1465 1487 0.99
20 21 2.2 1.4e+02 3.7 2.0 1 23 1578 1600 1578 1600 0.96
21 21 0.011 0.72 10.8 5.6 1 23 1611 1633 1611 1633 0.98

Sequence Information

Coding Sequence
ATGCTCCAGCAGATGTCCTCGCCATCGAGCGCACAACTAGGCGAGGTCGCAATTATCGTGCGCACCTTCGAAGGCCGCGTCTGCGGCGACGTGTCTTCGGGGGCCTCTTCGGATGCCACCGAAGATTCTGAATTGCCGCACTGCAAGATAAGAAGAAACTATAGTTGTATGAAGTGCACGTACTACACGCAGAATCCGCGCGCTTATCTTATGCACACACGCGACGTTCACTTCGTGAGGCTGAAGATTTTTGATTGTCCACATTGCCTTTACGCTTCAAGACACTATCAAAAACTCGTAAGGCACGTGAAAATGGTTCACGGAGGAACAGCGTCTGAAACATCGGCTAAAGTAGAACCAGAAGTTTCCCCTCCGGTTTACGACACCGGGAATGTCTCGGAACGGGTGGAAGACATGGTGGAAGAAATTGAAGACAACGAGGACATACAGATGGAAGTGGATGAAGCCAATGATGAACAACCGGAACGTTCAGATGATGCAGATGTAGAAATTGAGAGAATTCAGGAACCAACTACAAGAGATACACCAAAAAATAAGGGAAATTTTTTCTCGTGCGACAAGTGCAATTATGTTACACATTTACGCGCCAGGTTTACAAAACATGTCAAATATCACTCTATGCCGATGATCAAGTGTACCACATGTGACTTTCGGACACCTTATAAGTGGAACTTGGATCGTCACATGAAGAACCACGGCGGCACCGGAAGTTTCTTCTGTTCTATGTGCAATTTTACAGCAGacattaaacaaagtttaacaGTCCACGAAATGAATCATCACACACCGGCAGTGGGTTACACTGTCGCAAGTCGTCGCCGCAATCGCGTTGGCGCGAGCGACTTATCGCTAACTGAAGCGTCCAACGCGCTGCTCCCCAAGGAGGAAGAAGGGAGTAGCGATTCACGATCCTCGCATTCAGCCTCGgAAATGGGCCTTCAACACTCTGAAAAAGATATAATGACATCAAACAGTGATTCCAATGACGCAACAGAAATTGGACTGAAAGAACATTCGTTACAAGATCAAATGCAGTCAACTAACCCAAGCATACACGACTCCACGCTAAAACAATGCAAAAAAACTCCAAGACCCATTCCTCAGCTTATACCACTAAATGCATCAACACCTAATAATCAAAGCAAAACATCGCCTGGAGAACCACCGGCAAAGAAATTCAAAGAGTCAATAAACGAAACATTTACCGCAAACACTAATAGTACATCAGAAAGCCAATCAAATGCCTCTTCGATAAATGCAAAAGAAACTGGAACTCGAAAGAAAAATGAGTCATTTTTCGATCGACTTAAAGAAAGGCTTCTCACTGAGACTGGAGAAAATGGATCACTAACTTGTAAGAATTGTGGCTTTGAAAGCAAATGCTTATCAGAACATTCTGTTCATGAAAAAAATTGCTCTTCTTTAGGAAATCGCAGTTCTACAAACACTTTGATGTCCAGCTTAAGTTCCACACGGTGTCAAAACTGCAGACATAGATGCAAATCAAGCGCAGATTTACTTGTTCATATGAAAACCTGCATAAAAGCTGAGAAAGTCGAAGAAGCAACACTTGAAGATCCAAAAAGTCGAGAAAACAGTAAAACGTctttaaaaattgaaaaagaaGCGGAACCACATCCTATGGAAAATGTAGTTTTTGTTTGGAACAATATAAATCATGACACATCCAAATTCGATACACCTTTGGATATCAATATAAATGATGATTCTACTCAGCCAGAAATTACAAGAAGCTTTGAAAATGATGAAAACGAAAGTATGAATTTATCACCAAGTCAAGCTGCAggaaaaaatgtgtttaaatgTCCTCATTGTCCTTTCTGGGCCTCGACAGCATCCAGATTTCATGTTCACATTGTcggacatttaaataaaaagccaTTTGAATGTTCTCTTTGCAAATATAAGTCTAACTGGCGTTGGGACATAACTAAACATATAAAACTGAAGTCTGCCAGAGATCCTGAGCATAATGATGCCAAAGTACTGATGACTGACGAAACCGGCAGAAGAAATTATAGTAAATATAGTAAGTTCTTGGCTATGCCAGTTTTAAATGAGAATGGTGAGAATGAATTTCATTATTTAGACTCAAATACAGCTGTCGATGCTTCGATGGAAGTCGATGAATCATTCAGTGACGCCAACGACGGGACAAATACATCAGTCGAAATGCAACCTCTCAACCTACAGACACAACATGGCGAACTCAAATTTGATGCATTAGATATGAGGCATGCTGATAGTAAAAAGGTGAAAAAAACGCTTTGGAAGTGCAAAAAGTGCAATTATAGAGATCCATCGAAAGAAGCTCTACTGGAACATGTTCGTGAGCACTCGAGGGCAGAGGGTAATGATGATGACCCTAAAAACCTTAGTGTAAAGAAACCCGACAACGCACCAGATCCATCAGACTTAGCATACCGCTGTGGTCACTGCAATCAACTGTCAAACTGGAAACATGTCATACAGcgcCATTGCCGATTGAAGCATGAAGGTGTCATTAAAGTAATTACTACAGTAAAACCAAAACCGGACCCATCATCCTCTGCAGCAAACGACTCATACAATGACAGATGCCCAAAATGTCCATATAGAGCAAACGACAAGAACGCTCTTATGATTCACATCCAGCAACATCAGCCATCTGTTAATTCTATATTCAAGTGTTACTTCTGTCCATACTTCGTGAAAGATGAATGTGAGTTAGTACAACACCTGCAACTGCATGGCGTCACAGACCCTGAAGACTATATATCTAAGGCTATGGGATGCAGATCTCCATTACCAGAACCGCAAACGGTAGTACCTCCAACAAACCCTTCAGGCAGTACTAAACGACACAGATGTACGGAATGCCCTTACGAGACCAACAGTAAATCCCAATACATGTATCACGAACAGTTCCACAGGCTGCCTGCGGACACTCCCTATAAATGTCCCGAGTGTAACTACAGTGTATCTAAACGACATTTACTACATCAACATTTAAGAGTACATGGTATTATACCAAAGAAAAATGAAACAGAAGCGGAATTGGAAGCCACGCCATCGAACCAAAAGATGGAAATCAATACTGACATGTCTACCAACAACTTAGACGAGATACCATTTGTTTGGGTTTCGGCGAAAAATGAatttcataaaatgtataaatgtcGTTACTGTTCTTACGTAAACTCACAAAAGTGTAAAATACCCAACCATGAAAAAATTCACTCCTTCACTTTTGAAAACAGTGACGTAACAGTGTATAAATGTTTGGAATGCAAATTTACTTGCGATAATTCGGGAAGATTAGCCGAACATTCTAAATCTCATGGTGAAATATACGGCCGGATTTATTGCCCGGTTGAAGATGATATCCCAGATGAAGAACAAGTATCAAAATTGCGCAAAGTTATTGAACTTGAAAAAACAAGTAATGCTGGAGTATCACCTATAGAAGATCATACAATAAGTGAAAAcaaggaaattaaaattttatatttctgtgCAAAATGCCCAGCAAGATATTTTACTGAAAGTGAATTAAAAGTGCACGAAGGCTTCCACGAATcgacatatttatataaatgtaaaaactgTGATTTTACAGTACCAGAAGAGGATGAACTAACATTGCATCATATTGTGCACTCAGATGAATACCACACTAAAACCAAAATGCTCAAATTTGTTCATAACTTGCACCCTGCCTATAAAGAGCCTCGGTTGGAGCTAGTTCATTGTCAAGATATCTTAGAAGTAGCGTGGGTAGTGAATCCCATCAAACACAATGAAAACGAGTTGAACATTGAAATGAATACTAAGAAACAAAATGAGTCAAAACATACACCAAAACAATATTGTTGTAAAGAATGTCCAGCCAAATTTTTTAAAAGTTCTGCACTTAGTTATCACATGGGTTTACATGGGGGAGAAGGTGatcataaatgtaaaaaatgcaCTTACGCGGTAAAGAACATCgggaatttagcaaaacatgaACTTCTTCATGAACAAGAAAATAAACCAAGTAATTGTGATTACGAATCCGGCGAAGATGTGgactataaaaatattccacTATCGGGAACAGACCTATTTCAGAGAAAAACTGAAGCACAAAAGAGGGTGTTAATTGACAAAGATAAGTTAGTTAAACCTAATGATCATTTTCCACCAGTGCTTCAAGCTGATCCACAGTTCGGTTATCTTATGCATGGTAATCCAGAATTCATATATCCAACATATCTAAAAAATGGACGCCAGAAAGAAAAACGATacaaatgtcacaaatgtccCTCCGCATTCGAAAAACGAGAGCAATACAAAATTCATCTTTCTTTACACGGATCGAAACAGCGATATAAATGTGAACTTTGCGATTACTCTGTCAAGTATTATGCCAATTATGTCCAACACATGAGAAAACACCAAATGAATGATGAAGCACAAGCTGAAAGAAAAAAAGGTGGTAGCGGTTTTTCTGAATCTGAAAGCCACGACATTAAGCAGGAAGATAGTACTGATAACATAAAATTAGCTATTAAAACAATGCCTAGAGGAACGCCCAAAAGTGATTTTCAACAATTCTCAATAAGAGATCAACAAACCCTTAGATTATTACAGCGCAGACGGTCTATACATAACTCTGGAAAAGAAACAAACACATCGGAACCATCACCAACAAAGGAACGGAAATTGCATATGTGTTTATTATGTCCATACACAAATCAACGACAAGATGCCTTGAGCAACCACTACAAGCGCCACGATGATACCGATGTACTCACCTCGGGTAACCATAAGTGCTCTCACTGTGACTTGGTAGTTGTTCAGTCGCACTTTCTCCGAGAACATTTGAAGACGCATTTCAACTACCACAAAACGCTCACTCCTGAATGCTTTGTTGCAAACGAAGACGTCAGCTTTACCATTACAAAGATGGAAGAAAATAGTGAGCCTGTTGATCTCAAATTAGATTTTCTAAATAAGAGTTTTAAGTGTAACGATGAGAAAATGTTTGTCAAAATGAACACCGGAGAATTATTGGTAGAATAG
Protein Sequence
MLQQMSSPSSAQLGEVAIIVRTFEGRVCGDVSSGASSDATEDSELPHCKIRRNYSCMKCTYYTQNPRAYLMHTRDVHFVRLKIFDCPHCLYASRHYQKLVRHVKMVHGGTASETSAKVEPEVSPPVYDTGNVSERVEDMVEEIEDNEDIQMEVDEANDEQPERSDDADVEIERIQEPTTRDTPKNKGNFFSCDKCNYVTHLRARFTKHVKYHSMPMIKCTTCDFRTPYKWNLDRHMKNHGGTGSFFCSMCNFTADIKQSLTVHEMNHHTPAVGYTVASRRRNRVGASDLSLTEASNALLPKEEEGSSDSRSSHSASEMGLQHSEKDIMTSNSDSNDATEIGLKEHSLQDQMQSTNPSIHDSTLKQCKKTPRPIPQLIPLNASTPNNQSKTSPGEPPAKKFKESINETFTANTNSTSESQSNASSINAKETGTRKKNESFFDRLKERLLTETGENGSLTCKNCGFESKCLSEHSVHEKNCSSLGNRSSTNTLMSSLSSTRCQNCRHRCKSSADLLVHMKTCIKAEKVEEATLEDPKSRENSKTSLKIEKEAEPHPMENVVFVWNNINHDTSKFDTPLDININDDSTQPEITRSFENDENESMNLSPSQAAGKNVFKCPHCPFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYSKFLAMPVLNENGENEFHYLDSNTAVDASMEVDESFSDANDGTNTSVEMQPLNLQTQHGELKFDALDMRHADSKKVKKTLWKCKKCNYRDPSKEALLEHVREHSRAEGNDDDPKNLSVKKPDNAPDPSDLAYRCGHCNQLSNWKHVIQRHCRLKHEGVIKVITTVKPKPDPSSSAANDSYNDRCPKCPYRANDKNALMIHIQQHQPSVNSIFKCYFCPYFVKDECELVQHLQLHGVTDPEDYISKAMGCRSPLPEPQTVVPPTNPSGSTKRHRCTECPYETNSKSQYMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIIPKKNETEAELEATPSNQKMEINTDMSTNNLDEIPFVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHSFTFENSDVTVYKCLECKFTCDNSGRLAEHSKSHGEIYGRIYCPVEDDIPDEEQVSKLRKVIELEKTSNAGVSPIEDHTISENKEIKILYFCAKCPARYFTESELKVHEGFHESTYLYKCKNCDFTVPEEDELTLHHIVHSDEYHTKTKMLKFVHNLHPAYKEPRLELVHCQDILEVAWVVNPIKHNENELNIEMNTKKQNESKHTPKQYCCKECPAKFFKSSALSYHMGLHGGEGDHKCKKCTYAVKNIGNLAKHELLHEQENKPSNCDYESGEDVDYKNIPLSGTDLFQRKTEAQKRVLIDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGGSGFSESESHDIKQEDSTDNIKLAIKTMPRGTPKSDFQQFSIRDQQTLRLLQRRRSIHNSGKETNTSEPSPTKERKLHMCLLCPYTNQRQDALSNHYKRHDDTDVLTSGNHKCSHCDLVVVQSHFLREHLKTHFNYHKTLTPECFVANEDVSFTITKMEENSEPVDLKLDFLNKSFKCNDEKMFVKMNTGELLVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01359347;
90% Identity
-
80% Identity
-