Basic Information

Insect: Amorpha juglandis
Gene Symbol: zfh1
Assembly: GCA_949126905.1
Location: OX421372.1:313525-327130[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.014 0.87 10.6 0.4 1 23 74 96 74 96 0.95

2 8 4.5e-06 0.00029 21.5 3.0 1 23 107 129 107 129 0.98

3 8 2e-06 0.00012 22.7 6.2 1 23 138 160 138 160 0.99

4 8 0.00014 0.0088 16.9 1.0 1 21 166 186 166 187 0.95

5 8 0.0013 0.081 13.8 1.5 1 23 450 472 450 472 0.98

6 8 1e-05 0.00066 20.4 1.1 1 23 770 792 770 792 0.94

7 8 8.7e-05 0.0055 17.5 7.6 1 23 798 820 798 820 0.98

8 8 0.056 3.5 8.7 8.1 1 21 826 846 826 847 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.014	0.87	10.6	0.4	1	23	74	96	74	96	0.95
2	8	4.5e-06	0.00029	21.5	3.0	1	23	107	129	107	129	0.98
3	8	2e-06	0.00012	22.7	6.2	1	23	138	160	138	160	0.99
4	8	0.00014	0.0088	16.9	1.0	1	21	166	186	166	187	0.95
5	8	0.0013	0.081	13.8	1.5	1	23	450	472	450	472	0.98
6	8	1e-05	0.00066	20.4	1.1	1	23	770	792	770	792	0.94
7	8	8.7e-05	0.0055	17.5	7.6	1	23	798	820	798	820	0.98
8	8	0.056	3.5	8.7	8.1	1	21	826	846	826	847	0.96

Sequence Information

Coding Sequence: ATGAAAGTGCACAGCTCGCTTATGGGAGTTGGCGGTTGGTACGAATGCTTGGCGGCCGGTTGGCTTGCGGACATGAGGAGTAAGCAGGTCCCCACGTCTACCACCTCGGCCAGGCGGCTCGCGGCCTTGATCCGTCCGCTGGCAGGCGGCGGGTCCGAGGGCAAGCCGTCTGAGGAGGAGGAGGAGCGCGGCGGGTCCCCGCTGGGGCCCGGGGGCCCGTTCACCTGCAGCCAGTGCCGCGGCGCGTACCCCACGCGCGAACAGCTCGAGAGACACGAAACGCTCCACTCACCCAGCACACAGGTGGATACAGTCAAATATACATGCAAAATCTGCCACAAAAGTTTCGCGAATGTGTACCGTCTGCAGCGGCATATGATCAGTCACGACGAGAGCGCCAACCTACGCAAGTTCAAGTGCAACGACTGTGACAAGGCGTTCAAGTTCAAACACCACCTCAAGGAGCACCTGCGCATCCACAGCGGCGAGAAACCGTTCGAATGTGCCAATTGCGGAAAAAAGTTTTCGCATTCTGGATCCTACTCCAGCCACATGACTTCTAAGAAGTGTCTCGTTATGAATCTCAAAATGGGTAGAATAAAGGCCAACAATCCTGCTCTAAACCCCGACCGGAGCCCGGCTCGAAAGCGCGGCAACCCTATGGTTGCATCACAATTGAACAACAATATCGCACCTAACGGGAATACATTCCTTCCCATACTTCCAAAGTACAACGAAGCAGCGGCGTTCTTTGCCTCTATGTCGTCGCAAGAAAACAATTTCCATCGGCCGCCTCTAGGACAGGCCGGCCTCAACCCCTTCTATATGCCTCCCGGAATACCAATGAGCCCAGCGAGCGGGATCGCTCCATACAGTCTACCCGccataagccaaatctttgaaCAATGGGCGTCTTCACAATATTCGCACAGAAAAATGGAGAACGCCGCGAGTCCGAAACATAATAGTCCTGTGCTTGGTGATCCTGAAGACTTGATAGAAGAAGTGACCGAAGAGGATGATAAGCGTTCTGAAGGCAGTGCGGAGCTTGTGATGGACATAGAAGACGATGAAGCCGTTGCCATAAAGAAAGAACAAGAGGAACGAGAGACTGATCTATCACTATGTCGCAATTACAATTCCGTCCCTATAAACAACAACGGCCTTAAGTGCGACAACAACCACTCAACCTATAATACAATATTGGAATCGGTCAATGAATCAGTGACAAAACACTTCTTTAGTGCGAATATGGAAAAACTGTCACCCACGACGGGTAACATATGCCCTAATATTGAACCTACACCTACGCCACATGTTATCATTAAAGAAGAGCCAGAAGATATTTATAGATGTTTAAAATGCAACTCTATTTTTAGTAACAAAAGTGACTTCGTGGAACATGAAAAGTCACATTGTGGTAACTTATTCAGAAAACATGAAAGCTTGGCAGCTCAAGTAGCCGAAACGGTAGCTCTAACTAGGATAGAAGCTGAAATGCGGGTGTGCGGCTCCGTGCAGAGCGGAGTGAGTGCTAGCGAAGATGAAGATTGTAAAGATGAACGCGACGACAAGTTGTCTGTACACGACAACGATAGGAAGATCAGGGTGCGGACGGCGCTAAGTGAAGAACAGCAGACGGTATTAAAAGAACACTATGCCCTCAATCCCAGACCAAATCGTGAGGAGTTTAAAAGAATAGCACAACAAATAGGCCTCGACAACAGAGTGGTTCAAGTGTGGTTCCAAAACAACAGAGCCAGAGTACGTAGAATGACGCAAACGTTAAATATGTCCGACCAACCTTTGGACCTGTCTACGAAGAAATCAAACCCGTCGATCACGTCTAGTCCTTCGCCGTCGCCGTGCAGCATTTCAGTAACACATTCCGACTCCGAGGAAGCGGTGAATCTAAGTCAAAAGTCATCGCGCAGCACGACACCACATCGCACCAGTTATACACACGCCTACCCACATTCCAATTGCTCCTCGTCTTCGTTGACCGATTTTCGGCTGTCCCCGTCACCGGGCGAAAATATAAATGGGCATAAGCGATTACTACAGCAAAAATTGAATCCTTTAGTGCCAATGGAAAAGCTTTTACAATACAATGACTTGGCAAATGGGCGGTCTCCAATACTCAGCATGCACATGTCCTCAGACATCACGCGACAAGGCAGTCCATCATACGAGCGACCCCAATGGGGGGACGAAACGCAAACTCCAAACGAGTTCGACGATGAAGCTACAGTACTTAAAAAGAGTAAGCTCAAACATGGAACAGAGATTAAGGAAGGTGAAGGGCAGTTCGTATGCGACCAATGCGACAAGACTTTTGTAAAACAGAGCTCTCTAGCGAGACATAAATATGAACATTCAGGTCAACGCCCTTACAAATGCTTGGAGTGTCCGAAGGCGTTCAAACACAAACATCACTTGACCGAGCACAAGCGGCTGCACACCGGCGAGAAACCGTTCCAGTGCTGTAAGTGCTTCAAGAAGTTCTCCCACTCTGGCTCCTACAGCCAGCATATGAACCACAGGTTCGCCATATGCAAGCCCTACAGAGATTAG
Protein Sequence: MKVHSSLMGVGGWYECLAAGWLADMRSKQVPTSTTSARRLAALIRPLAGGGSEGKPSEEEEERGGSPLGPGGPFTCSQCRGAYPTREQLERHETLHSPSTQVDTVKYTCKICHKSFANVYRLQRHMISHDESANLRKFKCNDCDKAFKFKHHLKEHLRIHSGEKPFECANCGKKFSHSGSYSSHMTSKKCLVMNLKMGRIKANNPALNPDRSPARKRGNPMVASQLNNNIAPNGNTFLPILPKYNEAAAFFASMSSQENNFHRPPLGQAGLNPFYMPPGIPMSPASGIAPYSLPAISQIFEQWASSQYSHRKMENAASPKHNSPVLGDPEDLIEEVTEEDDKRSEGSAELVMDIEDDEAVAIKKEQEERETDLSLCRNYNSVPINNNGLKCDNNHSTYNTILESVNESVTKHFFSANMEKLSPTTGNICPNIEPTPTPHVIIKEEPEDIYRCLKCNSIFSNKSDFVEHEKSHCGNLFRKHESLAAQVAETVALTRIEAEMRVCGSVQSGVSASEDEDCKDERDDKLSVHDNDRKIRVRTALSEEQQTVLKEHYALNPRPNREEFKRIAQQIGLDNRVVQVWFQNNRARVRRMTQTLNMSDQPLDLSTKKSNPSITSSPSPSPCSISVTHSDSEEAVNLSQKSSRSTTPHRTSYTHAYPHSNCSSSSLTDFRLSPSPGENINGHKRLLQQKLNPLVPMEKLLQYNDLANGRSPILSMHMSSDITRQGSPSYERPQWGDETQTPNEFDDEATVLKKSKLKHGTEIKEGEGQFVCDQCDKTFVKQSSLARHKYEHSGQRPYKCLECPKAFKHKHHLTEHKRLHTGEKPFQCCKCFKKFSHSGSYSQHMNHRFAICKPYRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00281695;
90% Identity: iTF_01010694;
80% Identity: iTF_00063471;