Basic Information

Insect: Amorpha juglandis
Gene Symbol: -
Assembly: GCA_949126905.1
Location: OX421373.1:6454334-6455893[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 3.4 2.2e+02 3.0 2.4 2 23 204 226 201 226 0.87

2 10 0.0012 0.073 14.0 0.5 1 23 232 254 232 254 0.98

3 10 0.17 11 7.1 12.3 1 23 260 283 260 283 0.96

4 10 0.003 0.19 12.7 0.0 2 20 290 308 289 310 0.93

5 10 1.9e-05 0.0012 19.6 4.0 2 23 329 350 328 350 0.96

6 10 1.4e-06 8.9e-05 23.1 2.3 1 23 357 379 357 379 0.98

7 10 0.00016 0.01 16.7 0.2 1 23 385 407 385 407 0.97

8 10 7.2e-06 0.00045 20.9 2.1 1 23 413 435 413 435 0.96

9 10 2.6e-05 0.0016 19.2 2.2 1 23 441 463 441 463 0.98

10 10 9.3e-05 0.0058 17.4 2.7 1 23 469 492 469 492 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	3.4	2.2e+02	3.0	2.4	2	23	204	226	201	226	0.87
2	10	0.0012	0.073	14.0	0.5	1	23	232	254	232	254	0.98
3	10	0.17	11	7.1	12.3	1	23	260	283	260	283	0.96
4	10	0.003	0.19	12.7	0.0	2	20	290	308	289	310	0.93
5	10	1.9e-05	0.0012	19.6	4.0	2	23	329	350	328	350	0.96
6	10	1.4e-06	8.9e-05	23.1	2.3	1	23	357	379	357	379	0.98
7	10	0.00016	0.01	16.7	0.2	1	23	385	407	385	407	0.97
8	10	7.2e-06	0.00045	20.9	2.1	1	23	413	435	413	435	0.96
9	10	2.6e-05	0.0016	19.2	2.2	1	23	441	463	441	463	0.98
10	10	9.3e-05	0.0058	17.4	2.7	1	23	469	492	469	492	0.97

Sequence Information

Coding Sequence: ATGGCAGAAGACGCAGAAACTTATTGCCGACTTTGCGCGGAACCAACTCCAAAAACTCAACTTATATCACCACTTGAAGACGTTGGTATCAATTCCAAGATTGTAACAAAAATGCAGTGGATAAATATTGATGTTTCTTTATCAAATATACTTCCCAGCACAATTTGTTTCGCATGCTTCGATTCTTTGGAGCGTACGTGGATGTTTCTTCATAATGTGAGAACTGCCCAAGTGAAGTTAAATGAGATTTTTGCTAAAAAACTAGGCGACCAAATAGATGAGAAATTAGAGTTAGAGATCACAGATGTCGGGAAACCCGTAAATAGTGACTGGGATCACTTTCAAGGGGCCAAGATGGAGATAAAATCGGAATCCGAACAGTACGATGTCAACATCGATGAGCCTGCAATCATTGATATGGATTTATTAGTGAAAGCTGAGGATCCCAGCTTCGACGAAGATCACAGCGAAGGTTTTAATTCCACAGACAGCGACTTACCTCTACTTATTGGCAAAACAAAgacaaaaaagaagaaaaagtatAAGAGCAATGAGTTTGACAGACCGCTCATATCATTAGCTAGTGCCTCCTGGGATGATTACATGTGTCGTTGCGCGAACTGTGATGCTCAGTGCAAAAACATAATGTCACTGCGTCTACACTCATTACAAATACACTCATGTTGCTGCACATTCAAATGTTCCGATTGTGGTAAAGTTATTCAGAATTTCAAAGCTTTCGTTAACCATGTAAGATTGCATAAAAAACTGCTCCGATTTTGCTGTGAGTTTTGCAACAAATGCTTTAAAATGACCACATGTTTAAAGAAACATAGGAATAAGATGCATAGTGACATTTACCGGACCATGTGTCAGAACTGTGGAGCTACTTTCGACAGTCCTGAACTTCTCCAGGACCATCTCACACTGTTCACTAAAAACTACAAGAAACGTAACTTGAAAGAGAAACTTGATATTGAGTTGAAATGTAACATGTGTAATAAAGAGTTTAAATCACGCAGCAACTTACACCAACATAAACTTGTCCATACCGAAAGGACGAGAGACTTCTCCTGCCATGTATGTGGTAAGATGTTCTTCACGAAAGGCACATTGAGTACGCACATGATGATCCATGATGATTCGAAACCATTTAAATGTGGATTCTGTCCAATGGCTTTCCGAGCCCGTGGCAACCTACAATCACACATAAGCCTTCACTCGGGAGCGAAGCCGTTTGTGTGTGAACAATGTGGCAAAAGTTTTCGTGTGAAAAGACATTTGAAATCACATTCTATTGTACACACAGACCTTATGCCGTATGTTTGTGACTATTGCAATAAGCCATTTAGGTTTAAGACTCGTTTAAATCTCCATTTGAGGCAgcacactggtgctaaaccaTACAACTGTGTGCTATGTCAGAGGGACTTTACGAACGGATCAAATTTCAAAAAACATATGAAACGGAGACATGATATTGATACTTCTAAGCGGAAATATCAAAATGTTGGTAATGTAAATGAAGAGCAAGCAACTAATGAGACGGCTGTTTCATGA
Protein Sequence: MAEDAETYCRLCAEPTPKTQLISPLEDVGINSKIVTKMQWINIDVSLSNILPSTICFACFDSLERTWMFLHNVRTAQVKLNEIFAKKLGDQIDEKLELEITDVGKPVNSDWDHFQGAKMEIKSESEQYDVNIDEPAIIDMDLLVKAEDPSFDEDHSEGFNSTDSDLPLLIGKTKTKKKKKYKSNEFDRPLISLASASWDDYMCRCANCDAQCKNIMSLRLHSLQIHSCCCTFKCSDCGKVIQNFKAFVNHVRLHKKLLRFCCEFCNKCFKMTTCLKKHRNKMHSDIYRTMCQNCGATFDSPELLQDHLTLFTKNYKKRNLKEKLDIELKCNMCNKEFKSRSNLHQHKLVHTERTRDFSCHVCGKMFFTKGTLSTHMMIHDDSKPFKCGFCPMAFRARGNLQSHISLHSGAKPFVCEQCGKSFRVKRHLKSHSIVHTDLMPYVCDYCNKPFRFKTRLNLHLRQHTGAKPYNCVLCQRDFTNGSNFKKHMKRRHDIDTSKRKYQNVGNVNEEQATNETAVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01359096;
90% Identity: iTF_01010647; iTF_00858840;
80% Identity: -