Ajug018339.1
Basic Information
- Insect
- Amorpha juglandis
- Gene Symbol
- SMARCC2
- Assembly
- GCA_949126905.1
- Location
- OX421387.1:6394649-6417592[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.8e-15 5.5e-12 46.0 0.1 3 44 555 596 553 598 0.95
Sequence Information
- Coding Sequence
- atgaaAGTGTTTATGGACATGAAGCCGGGCGGTTCGCTGTGTACAGTACTGGCCACCATGTTCCGCTTCAAATCGGAGCAACGGTGGCGCAAGTTCGACTTCCAGGTCGGTAAGAACCCATCTCGTAAAGACCTGAACGTTCAAATGATGATGGAGATTGAATCGTCTCTGCTGGGAGCCGAGATCATCCGCTCCCCTTGCGTGTACATCAGGCCTGAAGTGGACAAGGCGACCGCCAACAAAGTTAAGGATATTGTTGGAAATCATCAAGGAGAGATTTGCGagGACGAGGAAGATGCAACGCACATTATTTACCCGACGGTGGACCCCTTGGAAGAGGAGTACGCGAGGCCCGTGTTCCGAAGAGGCAATCATGTGCTAGTACATTGGTATTACCTGCCTGACAGCCATGACACATGGGCACAGGCTGACTTGCCGGTGGACGTGCCAGAGAGTGTGAGTTGGGAGTGTAACCGGGCGGAGGCGTGGCGAGTGACCGCGTCGTGGGCGCTCGACCTGCCGCAGTACAACGAGTGGATGAACGAGGAGGACTACGAGGTCGACTCCAATGGGAAGAAGAAAACGCACAAATTACGGTTGTCTGTAGACGACCTCATACCCGGCGCGGAACCTTCCAGTAAAAGCAAGAAAGGCAGTAAGAGGAAACGGTCACCGTCACCGCCGCCGCAGAAACACGGCAAGAGGAAGAGCCGTGTGACGAAGCGGCGCGATAATGATGTCGATGAGGAAGAAGACAATGCATCCAGGGATAATACCGATGTCGCGCCAACTCCTGAAGCAGAAAGACCTGCGGAGGCGTCGACTCCGTCCGCGTCGAGCAGCAGCGGTGCCGCCACCAGCGTCAGTGGTGCCGCCGCGAGCGCGGGCGCTAGTACGGGCGGGGCGGGAGCGGGGGCGGgagcggcggcgggcgcgggagCGGGCGcggagacgagcgaggcgcccgccacgcccgcgccgccgctcgACGCGCACGACGACTCGCAGGGGAAGCACTCCGACTCCAACACACAGGAGATGCTGACGAAAGAAGAGCTAGAAGACAATGTGACCGATCAGACTCATCACATCGTGGTGCCTTCGTACTCCGCCTGGTTCGACTATAACTCTATACACATGATCGAGAAGCGCGCCCTGCCAGAGTTCTTCAACGGAAAGAACAAGTCCAAAACGCCTGAAATATATCTCGCGTACAGAAACTTCATGATCGACACATACCGTCTCAACCCTACGGAGTACTTGACTAGTACTGCGAGCAGACGAAACTTGGCGGGCGATGTTTGCGCTATCATGCGCGTGCACGGATTCTTGGAGCAGTGGGGCCTTATCAATTACCAGTTAGAAGCAGAGTCCAGACCAACGGCGATGGGTCCCCCGCCCACATCTCACTTCCACGTGTTGTCAGACACACCGTCCGGCTTGCAACCGCTCATTGCAAGAACTGCACAACCGAGACCTGCGGAGAATGTGCCAAAAGTGGAGCCTGGATTACCCAACGGCGCAGAGAGTGCCGCCGCACCCTCCGCTCCCGTACCGTCTGTACTCAAGACGGAGCCCGTGCCTGAACTACCGCACGCACCGGGACTCAAACTCGACCAGTACCGTGGCGGcatgggcggcggtggcggcggtcGCGGGCGCGAGTGGACCGAGCAGGAGACGCTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCCGCGCACGTCGGCACGCGCACGCAGGACGAGTGCATCCTGCACTTCCTGCGGCTGCCCATAGAGGACCCATATCTGGATGATCCCGCGTCAGGTGGCGTGTTAGGTCCCCTTGCGTATCAGCCGATACCGTTCAGCAAGACTGGTAACCCCGTGATGAGTACGGTTGCGTTCCTCGCATCTGTGGTCGACCCGCGTATCGCCGCCAGAGCGACTAAAGCCGCCATGGAAGAGTTCTCAGCCATTAAGGACGAGGTGCCGGCCGCGATGATGGAGGCGCACGTGAAGGCGGCGGGCACgctgggcgcgggcgcggcgctcGCCGCCACCGGCATCGCGGGCACCGCGCCCCCCGCCGTACCCACCCCGCCAGCCGCGCCCACCCCGCCCGCCGCCGACCTGCCGCCTGCCGTTGAAAAGAAAGAAGGTGCGAGTGAAGTGAAAAACGAGCCGATGGAAGTGGAAGAGAGTGAAGCTAAAGTGAAGGAGGAACCTTCAGAACCAACGCCAGCTGACGAAAAGGACAGTAAAGACTCGCTTTCACCACAACCAGAAGCGCCAGCAACGGTGGACGCGAAGCTACAATCAGCGGCGGCGGCTGCACTCGCCGCGGCCGCCGTCAAGGCGAAACATCTCGCCGGGGTCGAGGAACGGAAGATCAAGTCACTGGTCGCGCTGCTCGTCGAGACGCAGATGAAGAAGCTGGAGATCAAACTCAGGCACTTCGAGGAGCTGGAGGCCACTATGGAGCGGGAGAGAGAAGGTTTGGAGTATCAACGGCAACAATTAATACAAGAACGGCAGCAGTTCCACCTAGAACAGTTGAAAGCAGCTGAATTCCGATCAAAACACCAAGCTCACCAGAGGTTACAAGCGGAGAGCTGCGGCGCGGTGGCTGCAGGCGGTGGTGCGAGCGGCGAGCCCCCCGGCgaggcgccgccgccgccgccctccgcgcccgccgcgcccgccgcgccgcacgcACCGCACGCACCGCCAGCGCCCACCCACGCATAG
- Protein Sequence
- MKVFMDMKPGGSLCTVLATMFRFKSEQRWRKFDFQVGKNPSRKDLNVQMMMEIESSLLGAEIIRSPCVYIRPEVDKATANKVKDIVGNHQGEICEDEEDATHIIYPTVDPLEEEYARPVFRRGNHVLVHWYYLPDSHDTWAQADLPVDVPESVSWECNRAEAWRVTASWALDLPQYNEWMNEEDYEVDSNGKKKTHKLRLSVDDLIPGAEPSSKSKKGSKRKRSPSPPPQKHGKRKSRVTKRRDNDVDEEEDNASRDNTDVAPTPEAERPAEASTPSASSSSGAATSVSGAAASAGASTGGAGAGAGAAAGAGAGAETSEAPATPAPPLDAHDDSQGKHSDSNTQEMLTKEELEDNVTDQTHHIVVPSYSAWFDYNSIHMIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTASRRNLAGDVCAIMRVHGFLEQWGLINYQLEAESRPTAMGPPPTSHFHVLSDTPSGLQPLIARTAQPRPAENVPKVEPGLPNGAESAAAPSAPVPSVLKTEPVPELPHAPGLKLDQYRGGMGGGGGGRGREWTEQETLLLLEALELHRDDWNRVAAHVGTRTQDECILHFLRLPIEDPYLDDPASGGVLGPLAYQPIPFSKTGNPVMSTVAFLASVVDPRIAARATKAAMEEFSAIKDEVPAAMMEAHVKAAGTLGAGAALAATGIAGTAPPAVPTPPAAPTPPAADLPPAVEKKEGASEVKNEPMEVEESEAKVKEEPSEPTPADEKDSKDSLSPQPEAPATVDAKLQSAAAAALAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRSKHQAHQRLQAESCGAVAAGGGASGEPPGEAPPPPPSAPAAPAAPHAPHAPPAPTHA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01358825;
- 90% Identity
- -
- 80% Identity
- -