Basic Information

Insect: Amorpha juglandis
Gene Symbol: -
Assembly: GCA_949126905.1
Location: OX421383.1:13194147-13206088[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.5e-10 1e-07 31.9 0.0 1 39 244 282 244 286 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.5e-10	1e-07	31.9	0.0	1	39	244	282	244	286	0.90

Sequence Information

Coding Sequence: ATGGATGTGTCGTGGGATGCGGATAATTTCGAGCCTGAACTGCCGACCACGTTGGCAAGTTCGAATAAATGGGAGGGCGAGGACGAGGACGACAACGTCAAGGAAAGTTGGGAAGACGAGGAAGAAGAAAAGAAGGATGAGGAAAAGACGGAACTGCCTCCGCCTCCAGCCAAGCCCAAGAAGAAAATACACGACAAAATAGCTGAAAGAGAGCGGCAAGAGCGTGAAAGGGCGGAGCGCGTTTCAGTGGAGAAGTCAGAGGAGCTGACACCTGAACAGAAGTTGGCTGAGAAGCTGCGTCAGCAAAAATTGCAAGAGGAGTCGGACTTGAAACTCGCCTTGGAAACCTTCGGCATAACGGAAGGAATGACTGGCAAGTTGGACACCTTCCATCCGACTACAAAGGATGAGTTCACAGAATTCTCCGAGCTGCTCAGcaaaaagattaatttatacAAAGCTAAGGAGGAATTCCCTGCATTCGTGGACGACCTCGTCAAAAGTATTGTTGTTCAAAtgGCATCAGCAGATATCAGAAGGATAAAGTTGACAGTAGACAACTTGTATATTGAAAAACAGAAAGCCGAAAAGAACGACAAGGCAAAGAAACCCACCAAGGGCAAGGGCAAAGCCAAATTAAAAGTTGAAGGTGACAATATTATAAACATGCCAAGAAAAAGAATTTGTCCGGCACCCGGTACGCGTAAATACGGGAAAAAAAGTCGTTACACTGAAGAGACTCTCCTAAGAGCTTTAGATGACATACAAAATTGTAAGATCTCCCAGAGAAAGGCGTCACAAATTCACAATATTCCGTGGAgcactataaaatataaacttaaaggTATGCATTCCCGGGCAGTAGGAAAGCCACCAGTACTCTCAGAAGATGAAGAAAAATCTGTAGTGTCGCACGTAGCAGCGTTATCTGACCTAGGAATTCCCATCGGTATGCGAGATGTACGAGCTGTAGTCAAAATATATCTAGACGATAATAAAAGACaaataaaagaatttaaaaacaatttgccGGGGTGGGAATGGGGCAAATTATTTCTAGAGCGACATTCCTGTATAAAACAAAAGGTGGCCCACAGTATTAACATAAAAAGAGCACAAGTTACCCAGGaaatgatagattttttttacaataatctgAGTATAGAACTGGTAAATGTGCCAGCTAGCAACATTTTCATTTTCGATGAAACTGGGTTTCACGATGATCCTAAGAAGCAGAGGCTTCTATTTAGAAGGCAATGTCGAAGTCCTGAAATAATACGAAACGCGACTAAGTCATGCTACACTGTAATGTTTTGTAGCAATGCCCTAGGAGAATTTATACCactttatgtaatttataaagCCAAACAAAAGTGGTCAGATTGGCTAATTGGAGCTCCATCTGGTACTCGCATGGCAGTTACACCAACGGGATGGATAGATGCGGCCACCTTCGATGATTGGTTTGAACATCAATTGTTACCTGTATTAAGAAGAAAAGAAGGGAAGAAAGTAGTTATTGGGGACAATTTAAGTTCACACATTACCCCGAAATGTCTCCGACTTTGTGCTGACAACGACATTCGATTTATTTGCTTAATTCCCAACTCTACTCATCTCCTGCAGCCGTTAGATGTTGCATATTTCAGTGCATTAAAAAGTGATTGGCGGAAAATTTTACAAGCCTGGAGGAATACTAAAAGAGGCAAAATAGCCAATGCTTTGCCGAAACCTGTGTTTGCTACCCTTCTTTCTAAAACTATAGAAGCAGGGAAACTGACCGCTGCACAAAACGTTATTGCAGGTTTCCGAGCTTGTGGGTTACACCCTTTGAATCGTGAAGTGGTTCTTGTAAAACTCAAAGACTATTCAAAACCCTTAGAAAAGGTTCGTGAGTCGATTGGAGAAAACTTcaaaaaatgtatatcaaaCATTAGAGATAACAATCTTCAAATACAACAAAGAAAGAAGTTTCAGATACCAATAGCATCAGGAAAGAGTGTGTCTGTGGAAGAAGTAGAAAAATACTATCAAGCAAGAGACAAAGCCAAAAATACAAAAAGCATTTCTGGGATAGTAAAGAAAAGGGGTCGACCGGCAGgatctaaaaataaaagtaaagctCCGACTCCATCACCCGTTGCTGGTCCCTCAAACTTAGAGCAATCTCAAGCTTTCTCAGACTTGATGTCTGGAAACGTTTCGTGCTTTCCCTTGCGTATTGAACAAGAAATTGAAATGGAAACCTCAAATCATAATCCACCACTCAACATTGACTCCCAGATGAACCAAGAGACTCTTGAATATGATATTGAGGGAAATTATGAAACCTATGAAGGAATATTGGACAAAATAGAAGAAGAAAGGCCACAAATAAATTCCGAAACAAGATTTAAAAAGAGCAAGGGGGCTCATCTAAATCAGTACGAGTCGTACGGAAACTTCGACGACGAATACGACGATTTCATGTAA
Protein Sequence: MDVSWDADNFEPELPTTLASSNKWEGEDEDDNVKESWEDEEEEKKDEEKTELPPPPAKPKKKIHDKIAERERQERERAERVSVEKSEELTPEQKLAEKLRQQKLQEESDLKLALETFGITEGMTGKLDTFHPTTKDEFTEFSELLSKKINLYKAKEEFPAFVDDLVKSIVVQMASADIRRIKLTVDNLYIEKQKAEKNDKAKKPTKGKGKAKLKVEGDNIINMPRKRICPAPGTRKYGKKSRYTEETLLRALDDIQNCKISQRKASQIHNIPWSTIKYKLKGMHSRAVGKPPVLSEDEEKSVVSHVAALSDLGIPIGMRDVRAVVKIYLDDNKRQIKEFKNNLPGWEWGKLFLERHSCIKQKVAHSINIKRAQVTQEMIDFFYNNLSIELVNVPASNIFIFDETGFHDDPKKQRLLFRRQCRSPEIIRNATKSCYTVMFCSNALGEFIPLYVIYKAKQKWSDWLIGAPSGTRMAVTPTGWIDAATFDDWFEHQLLPVLRRKEGKKVVIGDNLSSHITPKCLRLCADNDIRFICLIPNSTHLLQPLDVAYFSALKSDWRKILQAWRNTKRGKIANALPKPVFATLLSKTIEAGKLTAAQNVIAGFRACGLHPLNREVVLVKLKDYSKPLEKVRESIGENFKKCISNIRDNNLQIQQRKKFQIPIASGKSVSVEEVEKYYQARDKAKNTKSISGIVKKRGRPAGSKNKSKAPTPSPVAGPSNLEQSQAFSDLMSGNVSCFPLRIEQEIEMETSNHNPPLNIDSQMNQETLEYDIEGNYETYEGILDKIEEERPQINSETRFKKSKGAHLNQYESYGNFDDEYDDFM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -