Ajug008210.1
Basic Information
- Insect
- Amorpha juglandis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_949126905.1
- Location
- OX421373.1:15344650-15371358[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.3e-13 5.2e-10 39.3 0.1 1 36 184 220 184 223 0.94 2 2 1.4e-18 1e-15 57.5 0.0 1 43 385 428 385 430 0.95
Sequence Information
- Coding Sequence
- atgcagtgttttgtaattcaaattacaggcgagcgacttgctcatctcgtcatggaattaaaaaaatatatattatttttatatctttacataAGTCCAGCTTCGGAGTCGGACAGCAGCTCGGTGTCGGGGGCAAAGAGTCCCGCGGCGGCGCCTCCCCTGTTGCAGCATCTGTTGCAGTTGCAGGCGCAGAACCCGCAGACCATCGCGCAGTTCCAGCAGATGCTCGCGGCGCTGGCGGCGCTGGGCACCGGGCTGGTGCCGTCGCCGCTCACGCAGGCCTGGATGATACAGCGGCTGGCGCAGCAGCGGCATCACACCGACagGCTAGGCGAGGGTGGTGACAAGCCACCGACGCTGTCGTCCCCGAGCCCGGCGGAACAGCCCCTGGACCTCAGCGCCAAGTCCACGTCCAGCACCAGCGGGACACCACCTCCGGACGCCAAACTCCTTGACAATAGGTTGAAGCGTGCATGCGCAGAAAGCTCGTCAGCATCAGCGTCGGCGTCGCCCGGAAACAGCGCGGCttcagcggcgcggcgcggataCACCGAGGAGGAGCTGCAGGCGGCGCTGCGGGACATACACGCGGGCAGGCTCGGcacacgccgcgccgccgcgctctACGGCATCCCGCGCTCCACGCTACGCAACAAGGTCACCAAGTACCCAGCCGACCCGCCAGACTCCGATCCCGACAGCGACGAGCGCGTCGACTCGCCGCAATCCGTCATACTCAAGATACCTACGTTCCCGCCGCCTGACGACAAGAGTCCCTCCCCCGCGGCCGCACCGCTCGCTCCTCACACGCCGCTCCCCCCTCCCCGACCGCTCCAACCCTCCCCCAGCCTGCTGCTGCCCGCCGTGTACGCGGACCCACCCGTCACACAACACATCTTTACCTCGCTCAACGACGTCATAGCCAAGAGTATAAGCCAAAAGTTCCAGCAACCGATCGACCGTTCGCACCAGCCGGAGCTGCAGTTCTTACGCGGTCCAGACGCGCGGCACGTGTCCGTCATTAAAACGCAGCAGGACAACCAGCGGAACTATGCGATGCCAAGCAACTCGAAAGCGACTTCTAACAACAACGGGCAGCCGGCCGCAGGCGGCAAAGGCACGCGGCCCAAGCGTGGCAAGTACCGCAACTACGATAGAGACAGCCTCGTGGAGGCGGTGAAGGCGGTGCAACGAGGTGAGATGTCCGTGCACCGCGCCGGCTCATACTACGGCGTGCCGCACTCGACGCTCGAGTACAAGGTGAAGGAGCGACACTTGATGCGGCCGAGGAAGCGCGAGCCTAAACCGCCGCAGGACATAAAGCCGCAGCCGCCGAAACCGCCGCCACCGAAGCCGCCGACCAAGCCGTTCTCGAACGGGCTCAACGGTCCCGATGCCCCCGGCTACCCGCCTGGGTATCCGTTCTGGGCGGCGCCGGGGTTCCCGCCACCGCCCGCGCCCGACCTGTACGCGTCGCATATGATGCGGCGGTTGCGTGACGAGGCGCCGCCGCCGACGAACGGCTCGTTCCTCGAGGGCATCATCCGATCGAGCCTGGAGCGGCCGGGCGCGGCGCTGATGCAGCGGCTGACGGAGTCGCGCACGCCCGCCGAGGCGCCGAGCCTGCTGCGGCGGCTGGCCGGCGACGTGGACGAGCCGCCGGCGCGCCGCCCCCGCATCGACAGCTCCGACCACGCGCTGGCGGCGGAGATGCGCGAGGTGGTGCAGCGGCTACGCGCGGACAAGCTGCGGCCGCGCAACGGCACGCCGACCCCGCCCGCGTCAGACGGCCTGTCGCCGCCgagcgcgccgcccgccgcgccgcccgacCGCGCCTAG
- Protein Sequence
- MQCFVIQITGERLAHLVMELKKYILFLYLYISPASESDSSSVSGAKSPAAAPPLLQHLLQLQAQNPQTIAQFQQMLAALAALGTGLVPSPLTQAWMIQRLAQQRHHTDRLGEGGDKPPTLSSPSPAEQPLDLSAKSTSSTSGTPPPDAKLLDNRLKRACAESSSASASASPGNSAASAARRGYTEEELQAALRDIHAGRLGTRRAAALYGIPRSTLRNKVTKYPADPPDSDPDSDERVDSPQSVILKIPTFPPPDDKSPSPAAAPLAPHTPLPPPRPLQPSPSLLLPAVYADPPVTQHIFTSLNDVIAKSISQKFQQPIDRSHQPELQFLRGPDARHVSVIKTQQDNQRNYAMPSNSKATSNNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDIKPQPPKPPPPKPPTKPFSNGLNGPDAPGYPPGYPFWAAPGFPPPPAPDLYASHMMRRLRDEAPPPTNGSFLEGIIRSSLERPGAALMQRLTESRTPAEAPSLLRRLAGDVDEPPARRPRIDSSDHALAAEMREVVQRLRADKLRPRNGTPTPPASDGLSPPSAPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00341252;
- 90% Identity
- iTF_01010285;
- 80% Identity
- -