Basic Information

Insect: Amiota minor
Gene Symbol: salm
Assembly: GCA_037043295.1
Location: JBAMAW010002666.1:574151-589352[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 5.3e-06 0.00054 20.9 0.9 1 23 539 561 539 561 0.98

2 7 1.1e-05 0.0011 20.0 2.1 1 23 567 589 567 589 0.98

3 7 0.018 1.8 9.8 1.5 2 23 966 987 965 987 0.98

4 7 7.6e-08 7.7e-06 26.7 0.5 1 23 993 1015 993 1015 0.98

5 7 0.00023 0.024 15.7 2.3 1 23 1025 1047 1025 1047 0.98

6 7 0.031 3.1 9.1 2.9 2 23 1455 1476 1454 1476 0.97

7 7 3e-08 3e-06 28.0 1.3 1 23 1482 1504 1482 1504 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	5.3e-06	0.00054	20.9	0.9	1	23	539	561	539	561	0.98
2	7	1.1e-05	0.0011	20.0	2.1	1	23	567	589	567	589	0.98
3	7	0.018	1.8	9.8	1.5	2	23	966	987	965	987	0.98
4	7	7.6e-08	7.7e-06	26.7	0.5	1	23	993	1015	993	1015	0.98
5	7	0.00023	0.024	15.7	2.3	1	23	1025	1047	1025	1047	0.98
6	7	0.031	3.1	9.1	2.9	2	23	1455	1476	1454	1476	0.97
7	7	3e-08	3e-06	28.0	1.3	1	23	1482	1504	1482	1504	0.99

Sequence Information

Coding Sequence: atgaaaaatcatttatcaACTGTTTTGTGTGCAATGCGTAGTGACTTTAAAGATAATCACCAGGAGACCATCAATAAAATGATACAATTTGGCACCGTTAAGTATGGCATCGTTAAACAATTGAAGGATCGTGCCAGGAGCAACGATTTGGATGCAACAAGTAGCGATCAAGAAGAGAATGGTGCCTGCTCACCGATTGCAGCAACGGGCAGCGCCAGTGCAGGCAGCAGTCCACAGCGTGAAAGCACGACGGCTGGCGAAAGCATGAGTAGCCGGAACACACCCGCAATGACGCCCACAGAAGAAGCGTCGGCACATGCCGAAGTAACAGAAGCCGCAGGAGGAGATGCGGCAGCTGAAGAAGATcacaatcataataataatattgtcatATCAAAGACAAATCAGTCAACTTTAGATACAAGTACCGAAGAGGAACAAATGTTGGAAGATGAGAAGGAGCCGGAAAACGATTCGATGAAAGAAGTTAAGCCAATAACTTATTCGGATGACATTGAACTAAAGATTGATGGAGAGATCAAATTAGAAGAGGAGCAAAGTTCGTCCCAGTTGTGTGAACCAACTCCAACGttgaatgatgatgttgaaatGGCTGAAGTACAAGAACTTGGTGGAGAAGAATCAACAGACGCCACAGCTACAGCCACAAAATCTCCAATTGTATCATCAACAGATGCAAATATTGCCAGTAGCCCACAACGGGAACAAGGacaggaacaacaaaaagaagaacaacaactactGGAGCAGCAGCATACGAGTAGTTCTGCTATTCTCCCTGGCCTTCCTGCTGGGCTTCCGCCTCAATTTGGTGCTGCACCAGTGACCTTGGAAGCGATTCAAAATATGCAGATGGCTATAGCACAATTTGCAGCTAAAACCATTGCTAATGGTGCAACTGGCTCTGACAATGAGGCAGCAATGAAGCAATTGGCCTTCCTGCAACAGACACTCTTTAAtctgcagcaacagcaactcTTTCAGATTCAACTTATCCAACAGTTGCAGTCACAATTGGCTATGAACCAAACGAAGAGCACTCAAGATAATGAAGATATGGATGAAGACGATGAAGAAGAGCGTGAAGATGGTGAGGAAGATACCTATGAGGAAGAGGAACGTATTGCTCAGATGGAGTTGAGACAAAAAGCAGAGGCACGCATGGCAGAGGCCAAAGCGCGCCAGCATCTTATAAACGCTGGTGTCCCATTGCGTGATGAAGGATCAAACACTGAGTCCCTGAAGCGGAAGCGAGATACGCAGGATGATGCGATCACGTTACAAGAACCTGCTGCAAGTCGACGGATAAGCTTAGATACCGCGGCAGCGAAGGCAACTTCTGCAGCCGATTCATTGGCTAAGTTGAAAGAAATGGAGAACAGGCCATTACCTTATGGCTCAGATTTGGCTTCCACCATAATAACAAATCACGATGATCTTCCTGAACCAAACTCCCTCGAAATGTTGCAGAAACGTGCCCAGGAAGTTCTGGACTCAGCGTCACAGGGCATTCTAGCCAACAATATGGCGGATGAGTTCGCTTTCAGTGATAAGAACGGTGATGGTAAGAACCGTAATGAGCCTTTCTTCAAACATCGTTGTCGTTATTGTGGAAAAGTCTTTGGGTCTGATTCAGCACTGCAAATTCACATACGATCCCACACCGGTGAGCGACCCTTCAAGTGCAATGTGTGTGGTAGTAGGTTTACTACAAAGGGTAATCTTAAAGTTCATTTCCAGCGTCATGCACAGAAATTCCCCCACGTACCAATGAATGCTACTCCAATTCCGGAGCACATGGATAAGTTTCATCCACCGTTGTTGGATCAAATGTCGCCGGATAGTTCACCAACACATTCACCCGCCGCTATGCCTCAACAGATGCCATCGGTACCTTTGTCGCTACCATTCCCACCGGGTGCGAACTTTCCTGGACTGCAAAGCCTTTATCGGCCGCCTATGGAGATTTTAAAATCGTTGGGTGCCGCCGCCGCTGCTGCTGGTAGTAACGCGATGTCTAATCCTTTTTTTCCACAAATGTCCGGTCTGAGTGATAGTAATGCCGTCGCGGCAGCAGCAGTTCAGGCTCAAGCTGCAGCTCAAGCTGCACTAAAACAAAGTCAGGAATTGCCAACAGATCTCCGTAAATCATCAGAGCCCAACTCTCCTGAAGTACCCCCAGTGGCGCCGGTTAAAACAGAACCTGAAGAAAGCAAAGATGAAAAGGAAGGCGACCAGCCACATCTACAGGAATCCGAAAAGCAGCACTTAATGAACGTGCCGAAAATATTGccaaataaagttaaaattaaagaGGAACGTATAGAAGATGAATCGCCACATCATGACGAAGATGGTAACCGAAACATGTCTCATGCTCTGTCTCAAGCGCCCGCTGCTGCACCTTCACCTAATGAAGAATCTGAATCGCTGGCTAACAGTCGTTCTAGCACGGCACATTCACCACTCACGCCGGCTGGCAAAACACCAATGCCATTGCCACCTGTTGTACAACCAGTGCAGCCACCACCAATCATGCACCCACAGCCATCGCCTGGCTCACATCATCACTTGGATCATCTGCCTACGCCTGGTCAGTTGCCACCATCGATGCATCATCGTGACGATTTCTTTGCAGAACGGTTTCCATTAAATTTCACTAAGGGTCTTTCACCAGAGCGTCACTCGCCCATACGCTCACCCGCGCACATTCCCCGCTCACCGTTTTTTAATCCCATTAAACATGAGCTTGCACTGTTGCCACGACCACACAGCAATGATAACTCATGGGAAAACTTCATCGAAGTCTCCAATACCTCAGAAACAATGAAACTCAAGGAActcatgaaaaataaaaaaatcaccGACCCGAATCAATGTGTCGTTTGCGATCGTGTTCTATCATGTAAGAGTGCTCTTCAGATGCACTACCGGACGCATACCGGCGAGAGGCCGTTCAAGTGTCGTATCTGTGGTCGAGCGTTTACCACAAAGGGCAACCTCAAGACACATATGGCTGTGCACAAGATTCGGCCACCAATGCGCAACTTCCATCAATGTCCCGTCTGCCATAAAAAGTACTCTAATGCGCTTGTTTTGCAACAACACATACGATTGCATACGGGTGAACCTACGGATTTGACGCCAGAGCAGATACAGGCGGCAGAAATCCGAGATCCACCACGCGCTATGATGCCGGGACCATTTATGAATCCCTTTGCTGCTGCAGCATTCCACTTTGGAGCAATGCCAGGCGCACATGGTATGCCTGGTGGTCCTGGCATGCCTGTTGGCCCACACAACGGGAATCTAGGATCGGAATCTTCGCAGGGTGATTTGGACGAAAACATTGATTGCGGTGATGACTTTGATGACGATATCTCCTCTGAGCACATGTCTAACAGCAATGACCTGGATGCCCATGAGCGACCACGTTCCAGTGGCGATGACTTTAAAGGattactttttgaacaaaaactaCGTATCGACTCAAGTGGTGTCGTCAATACCACACCGCGTCCCCACTCCACCGCAAGTAATGCCAACTCAATGAACTCCGCACCGAACAGTCCTAATTGCCCGCCTAAAATAAGCTCTACAAGTGCTGGTTCACCAGCGCCTTCCGCTTCTGATGCTTCACAGGGTGCACTCGATCTCACACCACGTTCTTCAGCAACTGCGACGTCAACATCTTTGGCGTCAGCCCATCTCAGTATACGCTCGCCACAACCAAACTTTACATCTGCTATTGCAGCAGCTGATAAAAAGAACCATCCGACAACACCAACGAATAATCCACCCGCTAAAAGTCCTCATCAATCTGCGGCAGCCAAGATGAGTCCTTCAATGCTTCCTTCAGCATTAACGCCGACGGTTGGTATTGATTGCCTGCCGCCGGGCTTGCAACATCATcttcagcaacaacatcaacaactaaTGCACCAACAGGCGGCTGTTGCGGCTGCGGctcagcatcatcaacatatgCAGCAACATGCTGTCGCAATGCATCAGGAACATTTACGTCGTGAAGCAGTCGCGGAAGCACATCACAAAGCTGctcagcagcatcatcatcagcaacaccACCAACCTCACCAACAATTGTCGCCACAATCCACAGCTCCTCCTCAACCACCCACATCATCACAAGTTAATGCACCGCCTCCTCCGAATCCATTGATTGCTGCGCGGCCACCGTTTGGCATGTTCCCCAATCTGCCACTCTTCCCACCAACGACGGCTCAGAATATGTGCAATGCCATGAACCAAATAGCCCAGTCTGTCATGCCCGCAGCACCTTTCAATCCATTGGCTCTTTCTGGTGTACGTGGCAGCACCACATGCGGCATCTGCTATAAGACATTCCCTTGTCATTCGGCGCTCGAGATACATTATCGCAGTCACACCAAAGAGCGCCCATTTAAGTGCAACATTTGTGATCGCGGTTTCACGACAAAGGGCAACCTCAAGCAGCACATGTTAACGCATAAGATACGTGATATGGAGCAGGAGACTTTCCGGAATCGTGCCGTAAAGTATATGAATGACTGGCCCGAGTAA
Protein Sequence: MKNHLSTVLCAMRSDFKDNHQETINKMIQFGTVKYGIVKQLKDRARSNDLDATSSDQEENGACSPIAATGSASAGSSPQRESTTAGESMSSRNTPAMTPTEEASAHAEVTEAAGGDAAAEEDHNHNNNIVISKTNQSTLDTSTEEEQMLEDEKEPENDSMKEVKPITYSDDIELKIDGEIKLEEEQSSSQLCEPTPTLNDDVEMAEVQELGGEESTDATATATKSPIVSSTDANIASSPQREQGQEQQKEEQQLLEQQHTSSSAILPGLPAGLPPQFGAAPVTLEAIQNMQMAIAQFAAKTIANGATGSDNEAAMKQLAFLQQTLFNLQQQQLFQIQLIQQLQSQLAMNQTKSTQDNEDMDEDDEEEREDGEEDTYEEEERIAQMELRQKAEARMAEAKARQHLINAGVPLRDEGSNTESLKRKRDTQDDAITLQEPAASRRISLDTAAAKATSAADSLAKLKEMENRPLPYGSDLASTIITNHDDLPEPNSLEMLQKRAQEVLDSASQGILANNMADEFAFSDKNGDGKNRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAQKFPHVPMNATPIPEHMDKFHPPLLDQMSPDSSPTHSPAAMPQQMPSVPLSLPFPPGANFPGLQSLYRPPMEILKSLGAAAAAAGSNAMSNPFFPQMSGLSDSNAVAAAAVQAQAAAQAALKQSQELPTDLRKSSEPNSPEVPPVAPVKTEPEESKDEKEGDQPHLQESEKQHLMNVPKILPNKVKIKEERIEDESPHHDEDGNRNMSHALSQAPAAAPSPNEESESLANSRSSTAHSPLTPAGKTPMPLPPVVQPVQPPPIMHPQPSPGSHHHLDHLPTPGQLPPSMHHRDDFFAERFPLNFTKGLSPERHSPIRSPAHIPRSPFFNPIKHELALLPRPHSNDNSWENFIEVSNTSETMKLKELMKNKKITDPNQCVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVLQQHIRLHTGEPTDLTPEQIQAAEIRDPPRAMMPGPFMNPFAAAAFHFGAMPGAHGMPGGPGMPVGPHNGNLGSESSQGDLDENIDCGDDFDDDISSEHMSNSNDLDAHERPRSSGDDFKGLLFEQKLRIDSSGVVNTTPRPHSTASNANSMNSAPNSPNCPPKISSTSAGSPAPSASDASQGALDLTPRSSATATSTSLASAHLSIRSPQPNFTSAIAAADKKNHPTTPTNNPPAKSPHQSAAAKMSPSMLPSALTPTVGIDCLPPGLQHHLQQQHQQLMHQQAAVAAAAQHHQHMQQHAVAMHQEHLRREAVAEAHHKAAQQHHHQQHHQPHQQLSPQSTAPPQPPTSSQVNAPPPPNPLIAARPPFGMFPNLPLFPPTTAQNMCNAMNQIAQSVMPAAPFNPLALSGVRGSTTCGICYKTFPCHSALEIHYRSHTKERPFKCNICDRGFTTKGNLKQHMLTHKIRDMEQETFRNRAVKYMNDWPE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00061385; iTF_00062227;
90% Identity: iTF_00061385;
80% Identity: -