Amin018953.1
Basic Information
- Insect
- Amiota minor
- Gene Symbol
- ttk
- Assembly
- GCA_037043295.1
- Location
- JBAMAW010002170.1:1274060-1278204[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-19 7.4e-16 58.2 0.0 2 45 609 653 608 653 0.97
Sequence Information
- Coding Sequence
- ATGTCCATGCAGCAATTTTGTTTGCGCTGGAACAATCACCAGCCGAATTTCATATCGGTATGTTCGTCGCTGTTACACAATGGGACGCTAGTGGATGTGACATTAGCGGCCGAGGGTCGACAGCTTCAAGCTCATAAGATTGTTCTCTCGGCATGTAGTTCATACTTTCAAacGCTTTTTACAACGAATCCGTGTCAGCATCCGATTGTCATACTAAAAGATGTCCAGTATGACGATCTTAAAACAATGGTCGATTTTATGTATTATGGCGAAGTGAATGTGTCGCAGGAACAATTGCCACACATACTCAAAACGGCGGAAATGCTTAAGATCAAGGGACTTGCCGAGATGCCCACCGATCCAGCTACTTTGGCCAAATCCGATAGCAAATCATCAAGTGAAGGCACAGAACTTGTTGGTGGCAGTGCTGCACAGAGTGGGGCTAGTGCCGGCGGCAGTGCTGGAGGTTTGGGTAGCAGCACCAGTGGAAGTGTTGGTGAATCTATTTGGGGTAGTACTGAAGCCcaattccaacaacaacatgccgCGGCGGCagctgctgcagcagcagcacaacaacaacagcatcaccatcatcaacaacaacaattgcaacagcaacaacaggcAGCGGCAgctcagcaacagcaacaacagcaggcCGCAgctcaacagcagcagcaacaacaacatcatcaccaccatcatcatcatcaacagcagcaacaacaacaacatcagcaaagtAATAGCCAAACACAAACGTCACAGGCGCATCATCAATTACGACGCACACCATCACCGCTTGGCGTTGGCACATCACCAGCAACACGACGAAAGCGTTTACGTAAATCTTCAAATAACGGCTCTGGCGATCGTAATAATTCCGATGAACAACACAGCAGTCTGGATGCCACTAATACATCTAGCGGCATTAGTCTTTCTCAAATGAGTCAAATGTCCTTTGGTACTGGGGCTGGTGCAACACTCGGCAATCTTTCTGGTCATTCGCTGCATACGGCTAAACTATTAAAGGAGTCAGCAAATGCTGATTTGGAACAACACCCACAGGATTCAGACTTGGAAGATGGACATGGACACATTCATATgcaaattAAGCCCGAAGTTGATATCGGAAGTGTTAATCAATCGATACCTTTGGATATATCGGGCGCAACAACACCCTCTGAGCACGATGCACCCAATTCACAGTCGTCACACTCAGGTCTGCAATGGACGGTTGTTGATTCAAGTTATTCGCGGTTTTCATTGCCCGCCTGCCAACCGAATTTGATTGGCAatggcggtggcggtggcggcggTGGTAATCCGAATTCAAGcagtagtggtggtggtggtggtagcgGCGGCGGGAACGCAGAccagcgacaacaacaacagcagcaggaaGCACAACATGCCaataatcaacaacagcaacagcatctacaacaattacaacactatcaacaacagcagcaacaacaacaacagcagcaacaacaaggcGCAGCGGGCACAGCGTACTCATCACAGATTATCACGGTGAATAACCTAGTCAGCGGCTATACAACGGCAGCACAAAATCTATCGCCCACATCACCCAACGAATCGAATATGGTGCAATCGGTTTATAGCCAAGGACCATCACCAACCCAATCGCCAGTGCATTCAGGTATTGGAGGCAGCAGTAGCAGTGGTGGAGGATCGGCAACGGCAAGTGGTGTGGGTGGTAGTGCTTCTGTAGGTTCGAATGGTGGTGGCGGAGGGACACCTGGTGGTGGTCAAGTGGTTAAACGTAAGCGTTCAGTAAATCCACAAGGTGATGAGAACTTCATACGCGCCCTTGAAGCAGTGCGTTCCGGTGGAATAGGATTTTGTAAGGCAGCACGTCTCTATGGCGTTAATAATCGTACACTTTGGTTGGAGTACAAGAAACGTGGTTATCCCGTTTCGAGGCCAAGCATTAAGGCACGTGTTGTAAAACAGGAACCTAATCtgtcaccatcaccaacaccaccaaccAACCCCGGCGATGATACGACCAACGAAAACTATGAACATCTAACAACGGCTGCTGTTGTAGCAGCTCAAACAGTTGCACTCAACATGCAATTGCCGCCACAATCCGAAACGCCGACACCATCATTGATGTGTGCCCCACATCATGCATCGGCAGCGGCTGCAGCGGCAGCTGGAACTGGTGGCGCTGGTGCCCACCCTGCAATGGGAGTAATGAATTTCCTTGATACACGACATATGGATTTTCCTGCCACGTTGCATACAATGTCACGACAACGATATATTGATTCATCCGGTGCTAGTGCTGGTACCACAGGCACTGGGGCAGGTACAATTAATGTGAATTCGGCAGCTGCAATGAATCTACAAAGTATTAATTTCAACTCAATATAG
- Protein Sequence
- MSMQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQTLFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPATLAKSDSKSSSEGTELVGGSAAQSGASAGGSAGGLGSSTSGSVGESIWGSTEAQFQQQHAAAAAAAAAAQQQQHHHHQQQQLQQQQQAAAAQQQQQQQAAAQQQQQQQHHHHHHHHQQQQQQQHQQSNSQTQTSQAHHQLRRTPSPLGVGTSPATRRKRLRKSSNNGSGDRNNSDEQHSSLDATNTSSGISLSQMSQMSFGTGAGATLGNLSGHSLHTAKLLKESANADLEQHPQDSDLEDGHGHIHMQIKPEVDIGSVNQSIPLDISGATTPSEHDAPNSQSSHSGLQWTVVDSSYSRFSLPACQPNLIGNGGGGGGGGNPNSSSSGGGGGSGGGNADQRQQQQQQEAQHANNQQQQQHLQQLQHYQQQQQQQQQQQQQGAAGTAYSSQIITVNNLVSGYTTAAQNLSPTSPNESNMVQSVYSQGPSPTQSPVHSGIGGSSSSGGGSATASGVGGSASVGSNGGGGGTPGGGQVVKRKRSVNPQGDENFIRALEAVRSGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKARVVKQEPNLSPSPTPPTNPGDDTTNENYEHLTTAAVVAAQTVALNMQLPPQSETPTPSLMCAPHHASAAAAAAAGTGGAGAHPAMGVMNFLDTRHMDFPATLHTMSRQRYIDSSGASAGTTGTGAGTINVNSAAAMNLQSINFNSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01195356;
- 90% Identity
- iTF_00061210;
- 80% Identity
- iTF_00062873;