Amin010724.1
Basic Information
- Insect
- Amiota minor
- Gene Symbol
- Mblk-1
- Assembly
- GCA_037043295.1
- Location
- JBAMAW010001433.1:222373-232290[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.9e-16 1.1e-12 48.1 0.0 1 45 34 79 34 79 0.95 2 3 6.8 1.9e+04 -3.9 0.5 3 11 198 206 197 206 0.86 3 3 5.5e-19 1.5e-15 57.2 0.0 1 43 597 640 597 642 0.95
Sequence Information
- Coding Sequence
- ATGGGTAGACTAGGTAAGGGAGTTGAAATGGATGAGAAGTGGAAaACCAAATCTTCTTGTGCCACTCCTACGCCCAGTAGCCTTCGTCGTGGCACCTATAGCGAAGATGATTTGAACAGTGCACTTCAGGACATCCAAGAAGGAAAGTTGGGTACACGCAAAGCGGCGGTTATCTATAATGTGCCACGCTCGACATTGCGCAATAAACTCTACAAACTGGCACTGGATGCCAAACGCAACAACACTCAATCATCAGAGGAGCATCTGCAACACTTACAGCGCGTACTCGAACGTGAAATTTCTGGAGATGAAGCTGCAACTGGCGCTAtgaacgatgacgatgatgaagatgacgaaGATGATGAGCATGAAGATGATGGCAATAGcaatgcatcatcatcaatgacaTCCTCATCACCCTTACGTCCACCAATGGGAACTGCTAGCTCCGCCACTGGGAATATGTCACAGCCTGCCAATGCTTATGAAGATCTTGCCAGCCGCATTGCAGCCGCTGCCTCAACAGCACAACTTCGCAAGCTAGTTGAGaacaatagcagcgatttgGGTGCTGGTAGTGGTGATGATGCCGATAACCTAGCGGCAGCCATCAGTGCCTCACCAAAGTTGGCTAGCTCACTGCGCGCACAGAGTAACACACCCACAAGCAGTAGTCATCTTCATTTGACGCATCCACAGAGCTCTTCGACACCAGCCTCTTCGGTATCACCACAGCCCGCATCATTGGCACAAGCCCAACAGCCGGCATTGCAGCCAGCATGGATTGATACGAATATGTTGCTCCAGACGCTTTTGCTGACCGCGGGTGTGTTGCAGCCCAAACTGGATGAGACTCTAACGGTGCGCGATTTAATAAATGCGCTGCTCTTGAACAGTGGTGGAGTCTTTATGAATGATTTGGCCAATGCACCGGCAGCAGCAGCCATTGCAGCTGCAGCAGCTGCTTCTCTCAATGCGAATGATGCTTCAGGATCATTGAATAATGGAAAACCAAATATGCTCGATCAACGTTTGTTGCTGCAACAATTGCAacttcagcaacaacaacaacagcagcaacagttaCCAACATTCCGACACCGCCTAGCAAAGTCTGACACGCCAGAGACGATTTCATCCATGGATGCAAGTGAAGCGTGTGACGATCCTGCTGCGGCAATTCTGAAAATTCCGTCCTACAAACCAATTGCGGGCGCCTCAAGCTCTTCGCCTTCATTGCTCGGCAACAGTGGCTCGGGTAGTGGTGTTGGACATCATAAtcacaatagcaacaataataattccaATTCGAGCACCAACCGTAATGGTGATAGTCCTCATTCCAGTTCTCCCATGCTTGCCGCGGCAGTTGCAGCTGCAGCTGCCAACAGCAATTCACATGGTGGAGGTGGCGGTGCTGGTAGTAGCAGCGGAGTGGCCTATcgtcacaacaacaatatgttaTCCGCATCACCTCCCTCATTCCGTGAAGTAATGGCCAATAGCATCCACCGCACTATCAATGAGCAAGCGAGCAAAGATGCCCAAGCCGCTGCTGCTTCAATGTTGGGCCTAGGAGGTGACCCAGAGCGCAACAATGGCACTAGCGGTAGTGGTGATTACAAAAAACCCAGTATCTCGGTTGCTAAAATTATCGGTGGCACTGATACATCACGTTTTGGAGCCTCACCCAATCTGCTCGCAAGCCATCATCAGCCTCAGCAAGAGGCAGCAGCCTTAGCTGCTGGCAAAGGAACACGTCCAAAGCGTGGCAAGTATCGCAATTATGATCGTGATAGCCTGGTTGAGGCCGTTAAGGCAGTGCAACGCGGCGAGATGTCGGTGCATCGTGCTGGCAGCTACTATGGTGTGCCCCACTCAACTCTCGAGTATAAGGTCAAAGAACGACATTTGATGCGTCCACGCAAGCGTGAGCCAAAGCCACAACCAGGTTTAGATGGCCTTAGCAGCAGTTCTAGTAACAAAAACTCCAGCCTCGATAAACTAAAGACAAACGCCAGCAGTACCACCAGTTCCAAACTCAGTAATGCGCTCAAGAATAATGCGCAATCggctgcagcagcagcgacAGTCTCTGCGCCAAATGGCATCAAACTGCCAATTTTCGATACATCACAACTGCCCTATCAGTCACACATGTTCTGGCAGACACCAGCAAATGCGGCTACCTTTCCCGGTCTCGACTTTAATCTGCTGCAGCAGCCGCAGCTGTCTCTCAAGGCAATGTGA
- Protein Sequence
- MGRLGKGVEMDEKWKTKSSCATPTPSSLRRGTYSEDDLNSALQDIQEGKLGTRKAAVIYNVPRSTLRNKLYKLALDAKRNNTQSSEEHLQHLQRVLEREISGDEAATGAMNDDDDEDDEDDEHEDDGNSNASSSMTSSSPLRPPMGTASSATGNMSQPANAYEDLASRIAAAASTAQLRKLVENNSSDLGAGSGDDADNLAAAISASPKLASSLRAQSNTPTSSSHLHLTHPQSSSTPASSVSPQPASLAQAQQPALQPAWIDTNMLLQTLLLTAGVLQPKLDETLTVRDLINALLLNSGGVFMNDLANAPAAAAIAAAAAASLNANDASGSLNNGKPNMLDQRLLLQQLQLQQQQQQQQQLPTFRHRLAKSDTPETISSMDASEACDDPAAAILKIPSYKPIAGASSSSPSLLGNSGSGSGVGHHNHNSNNNNSNSSTNRNGDSPHSSSPMLAAAVAAAAANSNSHGGGGGAGSSSGVAYRHNNNMLSASPPSFREVMANSIHRTINEQASKDAQAAAASMLGLGGDPERNNGTSGSGDYKKPSISVAKIIGGTDTSRFGASPNLLASHHQPQQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPGLDGLSSSSSNKNSSLDKLKTNASSTTSSKLSNALKNNAQSAAAAATVSAPNGIKLPIFDTSQLPYQSHMFWQTPANAATFPGLDFNLLQQPQLSLKAM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -