Amin018319.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Amiota minor
Gene Symbol
retn
Assembly
GCA_037043295.1
Location
JBAMAW010002168.1:6127053-6160025[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.6e-26 1.3e-22 80.6 0.0 2 89 293 378 292 378 0.96

Sequence Information

Coding Sequence
ATGCAACTGAATGCTATGGATTGTAACGGTCGTTCTTCAAATCATGTTGAACGCGACTCAGATGTAGGTGATGAGTCACATGGCGATCGCACAGACGATGATATGCGTGATTGTGATTCTCTAGATGACGGCGATAATAATCGAATTGCAAGCAAAATACAAGCAACAAAACCCCTAAATCATTCGATTCGAAGTAATGGTGGCAATATGTATTTCAATGACGGCATCAGTCCAGATGAATTGAATTCCAATCAATCAGCTGAAGTTGATTTAAGACATCATCAGTTTCCACCAAATCATCCATTAAACAGTTTCGGTGGTTTCATGGGCATCAGTGGTCTTCATTCCATTCCCAATTTACAACATAGTGatgtattagaaaaactgaaaatgcaAGTACGCGATATGAAAGTGGGACTCATGGATCAAGATTATATGAATGCTGCATTTGGCGCCCATGTTTTACCCGCATCAATGAGTTCATCATTTTCACTGCCAACGCCTGCAATCCCTTCATTTGGTCATAATGCACCAGGAATGGCGGCGCTACAACAATCACCAAACAACATGCCCAACGGCAGTGCCGGTTGTGTTAATGGTACAACCATCAACGGTGgtggcagcagcaacagtgtCGGTGGCGTGGGTGGGGGCAGCGGCCCGGCCGGCCATGGAAGTGCCAGCGCAAATACCAGTGGACCACATAGCTTTTCGTTCACATCACCGACAGCACCAAATGCCAAGGAAGTTAATTCGGCATCAAATTCTTCTACGTCAAGTGAGGCTTCCAATTCATCGCAACAAAATAACGGCTGGAGTTTTGAGGAACAGTACAAACAAGTGAGACAGttgtatgaaataaatgatgatCCGAAACGTAAAGAATTCTTGGACGATTTATTCTCTTTTATGCAAAAACGTGgaaCTCCTATCAATCGCTTGCCCATTATGGCCAAATCGGTGTTGGATCTTTACGAATTATACAATTTAGTTATTGCACGCGGTGGACTCGTTGATgtgattaacaaaaaattatggcAAGAAATCATTAAGGGACTCCATTTGCCATCGAGTATAACAAGTGCTGCTTTTACACTACGCACGCAGTACATGAAGTATCTCTATCCATATGAGTGTGAAAAGAAGAATCTTAGCACTCCTGCTGAACTACAGGCGGCTATTGATGGCAACCGACGTGAAGGCAGACGAACGAGTTATGGTCAATTCGATTCGATGCACAGCCATATCCCAATGggTCAAATGTCACGTCAACTTCCGGGTGGCATTCAACAAATGTCACCTTTGGCTTTGGTGACACATGCTGCTGCCGCCAATAATCAACAGGCGCAAGCAGCGGCTGCCGCTGCGGCCGCACATCGGCGATTGATGGGGCCTGGCGGCTTTGGGCAGGTGCCAAACTTGATGGATTATCTTCAGCTTTTGCAAGGCAAAAAAGATCAGAACTTAATCGGTGGTAGCGGTTCAAATAATGCCTTGGACTCACATCAGCAACGACAAAGGTCTCAAAGCCCCGAAATATCACGTGACGCTCTTAGCGCTCTCAAAATGTCACATGTAGCATTGTGGCAAATGTATCACACGAATACAAGTCCTCCGGCTGCAGGCGGTGGCATCACTGACCAACAACAACGGGAAGCGCTCAATCTTTCGGACTCTCCACCAAATGTCATAATTAAACGTGAACGCGAACGGGAAACATCGCCAGTACCCTCCGATGATTGCCATGATCAGGAACATGATCATTTGCCGCCACCTAATAAGCGTGTTGGCAATCCAGCGTTATTGAGTCCCGCTGCCTTTCCCGCTAATTTCTACCTAAATCCACATAATatggcagcagcagccgctGCCGCCAGTTTACATCACCATTCAAGCAGAATTCACCAATCGGATGCCTGCTCAGAGGCTGAAGCGGATGATGAATTCGGTAATGGTGCAACTGCGTCATCTGCACACGATGACAGTGAGCCACGACAATTGAATGGGCATTTCGACAAATCTGACGATTCAGCTATCGAAAATTCACCTTCGACATCATCGGCAGGCGGTGGGGGTGGTGGCAGCGGCAGTGGCGGCGGCCTGGGTAGCAATGGGGCGTGTAGTAGTAGCAACAGACACACTTCACCTCTTTccactaaaaacaaaaataatgccaATAAAGAACACAAGCAGAAACTAAATAAAGatattaataatgatgataatgcaaTGAATCAACAATCGCCAATTGAAGCATTAAAACTACTTTCGGGTCTACAATTTCAAGTTGTCCATAATGgtCTTGGTCCCAATGGGGAAAAACAACTCGATGTTAATCTTGAAGTAAATGGTATTCGATATTCAGGATTGTTAGTTGAAACCGAGAATCATAACTCcgaatttgaaagaaaagaaacctGCGACAACGATAAGAATGATTCTTTATCTAGCAATGATACAAGTTGTCATGATCTATCAGGAGGAGAACTGAAAATCGATGAAACTGCAGCTAATAAATCGATTGATGAAAAAGATcacacaacatcaacagcaacagcaacatcaacatcaacagccacatcaacatcaacattaacaactGAATCAACGGCAATAGATCCTATAACGACGGTGGCTACAACATAA
Protein Sequence
MQLNAMDCNGRSSNHVERDSDVGDESHGDRTDDDMRDCDSLDDGDNNRIASKIQATKPLNHSIRSNGGNMYFNDGISPDELNSNQSAEVDLRHHQFPPNHPLNSFGGFMGISGLHSIPNLQHSDVLEKLKMQVRDMKVGLMDQDYMNAAFGAHVLPASMSSSFSLPTPAIPSFGHNAPGMAALQQSPNNMPNGSAGCVNGTTINGGGSSNSVGGVGGGSGPAGHGSASANTSGPHSFSFTSPTAPNAKEVNSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRTSYGQFDSMHSHIPMGQMSRQLPGGIQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGPGGFGQVPNLMDYLQLLQGKKDQNLIGGSGSNNALDSHQQRQRSQSPEISRDALSALKMSHVALWQMYHTNTSPPAAGGGITDQQQREALNLSDSPPNVIIKRERERETSPVPSDDCHDQEHDHLPPPNKRVGNPALLSPAAFPANFYLNPHNMAAAAAAASLHHHSSRIHQSDACSEAEADDEFGNGATASSAHDDSEPRQLNGHFDKSDDSAIENSPSTSSAGGGGGGSGSGGGLGSNGACSSSNRHTSPLSTKNKNNANKEHKQKLNKDINNDDNAMNQQSPIEALKLLSGLQFQVVHNGLGPNGEKQLDVNLEVNGIRYSGLLVETENHNSEFERKETCDNDKNDSLSSNDTSCHDLSGGELKIDETAANKSIDEKDHTTSTATATSTSTATSTSTLTTESTAIDPITTVATT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00061707; iTF_00060884;
90% Identity
-
80% Identity
-