Basic Information

Insect: Amiota mariae
Gene Symbol: Bcl11b
Assembly: GCA_035041805.1
Location: JAWNKV010000733.1:2810-20321[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.031 4 9.0 2.4 1 23 357 380 357 380 0.95

2 6 1.1e-06 0.00014 23.0 1.5 1 23 936 958 936 958 0.98

3 6 0.0087 1.1 10.8 4.6 1 23 964 986 964 986 0.99

4 6 1.3e-06 0.00017 22.8 3.2 2 23 1243 1264 1242 1264 0.97

5 6 1.9e-05 0.0024 19.2 3.5 1 23 1270 1292 1270 1292 0.99

6 6 3.2e-05 0.0041 18.4 0.4 1 22 1300 1321 1300 1321 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.031	4	9.0	2.4	1	23	357	380	357	380	0.95
2	6	1.1e-06	0.00014	23.0	1.5	1	23	936	958	936	958	0.98
3	6	0.0087	1.1	10.8	4.6	1	23	964	986	964	986	0.99
4	6	1.3e-06	0.00017	22.8	3.2	2	23	1243	1264	1242	1264	0.97
5	6	1.9e-05	0.0024	19.2	3.5	1	23	1270	1292	1270	1292	0.99
6	6	3.2e-05	0.0041	18.4	0.4	1	22	1300	1321	1300	1321	0.97

Sequence Information

Coding Sequence: ATGAGCTTGAAGATGATTCTATTATACTCTGATACTACAGAAAATGATGCTGCTATTGCTCAAGATATCCTTACATGTGGCGCATGTCAAAAGACCTTTGCATTATCGGACATTGTCAAATTTATCCAACACAAAGTACTTCAGtgtaacaaagaaaattatggacAATGCACAACACAAGGTCCAACAATGGATCGAGATGCGGAAGAGGGTCGTCCACTTAGTTTAGTTAATCGCCGTCCATCAATATCGGCGCCTATAACAAATCGTTctaagcagcaacaacaacagcagcagcagcaacagcaacaaacatcatccacatccacaGCTTCTGGTTCCAGTAGCACAACATCAGGATCAGTATCAGGATCAAgtgcagcggcagcagcagcagttgctTCTGGCTCAAGAATACACACACCACCGCCAAGTCCAGCAGATTTATTAGCTGATGGGGCTTCAAGTACCCCAAAGCGTTTGgttgatgaaaatgataatacaACACCAAAAAATAGTGGAAATGGTAGTTCAAATGGAAGTGATGAAATAACCACAGCAGCTGATAGCACAAGTGCAAGTCCAAAGTCAATGACCCCAAttgcatcaacaacaacagcagcaacaacaacaacaagggaagatcatgatgatgatgatgatgatgatggagactatacatcaacaacaactacaacaacaacagctagAAAATCAGAAACAATATCACTAAGAACTGAtgacaaaatcaatcaaaaatcatctacatcaacagcatcaacaacagcatccACATCACAATTAATTGCAAtcaaacaagaacaacatgatgatgatgtattaACTCAACATCattacgatgatgatgatgatgatgacaacaacgatAATGCACATAATGAATCATCAATGATTGAAACATTACcaaaacataaaactaataatgataattacgCTGGCAATGCCAATGATGACAAGGAAGAACATCATGGTCAGCCAATGCGTAAAAGACCAAAAATTGAAGTTTGTGATGCTGAAGCCAATACGATACATACAGAACCCAGTAATTACACTTGCTCTACGTGCAAAACACGTTACACATCCGCCTGGCGACTCATTCAACACGTCCAACATTCGCATGGTGTTAAGATTTATGTGGAATCGAATGGAGCCACCAATGGTGCTTTGACAGTTGCCACACCAGCATCTCTAAATGCAGCAGCTGCTGCCGCTCTTGAGACAGGATCTCATAGTGCGACAACTTCACCCACAATTTCAGCTTTGCCCATTCATGCTTTAATGCAAACCTCAACGGGTTCCAACAACTCTTCTATTACATCAAGTGGTGCAGCCCAGAAGCGTAAtactagcaacaacaacacaagtgGTAGTAGCAATCACagtaatagcaacagcaacagcagcaacaatacaAGCATCAATACAAGTGGCAACATAagttgcagcagcaacaacaatagtaataacaaCTCAAATGCCAATTCTCCGAGTAGTGTTGCACTGGCggcagctgctgctgttgctcagcaacatcaacagcaacaacaacagcacctgctccatcaacatcaacaacagcaacaacaacgtgCTGCTGCCGCTGTAGCAGCTGTTGCTGCAGCTGAGCAACATAAAGCCcagcaacatcaccatcaacaacaacagcaacagcagcaacaacagcaacagcaacatcaacataataGCCTCACAACAGCAATGCAAAATGCACAGAATTTGGCTGCAGCCGCTGCTGCTGGTATGCGTCATCATCCTCTCTTGGCACCACCACCGGAAGCAATGCATGCAAATCCTTTCAATTTACTACGCATGCCATTGCCACCAGCGTTAGCTGGTCAAGGTACTGTTGTTCCTAGTGTTTCGCCTCTATTCACCAGGCCACATCCCGATCATCATTACCGCATGGAGCAATTAGTTTCCGAGCAATTCCGTCATCATGGGTTCAATTTGGCTGCAGCCGCTGTTGCAGCAGCAAACACTCTGGCGGCTGGTCCACATGcagctgccgctgctgctgctgcgcaATTCAATGCCACTGCAAATGGCGGTGGTGGCGCAGCACAGAATGCCGCTGCCGTTGTTAATGTTCCTAGTGCTTTGATTGGAGGTGCTGCTGCCATTGAACAGCGTCCACCATCTAGTAATAGCAGTCATCGTGGTTCAGTCCCACCGGCAGCATTGCCACCACCATCTTTATCatcacaacagcagcaacaacagcagcaacagcaacagtcaTCTTTGGTATCAGGTGCTACATCctcagcaacatcagcagcaggagcaggagTAGCTggagcatcatcagcatccaACAATGCACTTAATTTAGAACCACAGATGGATTTTTATTCGCAGCGATTGCGTCAGCTTGCGGGTACAACAAGCCCTGGAGCTGGAAACATTGTTAACTCGAGCTCGCCGAGTCCACGACAAAAGCAATCGCCGCATTTTGCGAGCCCATCACCATCCATGAGTAATACAGCAGCAGCTGTAGCCGCTGCAGCTGCCGCTGCTGCAGCCGCAGCTGGTGTAACCCAACTACCTCCCACAACACCACCAGTCACAAATAGTCACAGCAACAATAgccaccaccagcaccaccacaGTCATAGCCATCATCAGCAGGCACGTCCTCAATCATTAACGCCACCCGAGAAATGCGGTGAAAATGGTTCCCTTCATCATACAACACCACGTTCCGCCTCGACACCACCCTCGAAACCGGGCAGCCAGGATAATAGTTGCACTGGTTCCGGTTCATATGCATGCAACTATTGCGATAAGAAATTCCGTTTCGAGAACAATTTGATTATCCATCAACGCACGCACACCGGCGAGAAACCTTACAAATGCACCGCCTGCGAATTTGAATGCTCTCACATTAGCAAACTTATGAAGCACATGCGTGTCCATCGTAGTCCAGTTGAGGATGGTGCCAGCAATGCTGATTCCATTGAGtccaatgacaatgacaatgacgatgatgattcCGATGAACATGAGGAGGATAATATCGAAGATGAAAACATGgatgatgaagacgatgaCGATATGGAAGATGGTGAAGATGTTGATTATGAAGCTGAAGATCTTAGTGTCAGCAATCGCATTGATGGCAAAAGTCAAAGTCCAAAGACAAGCACCaatagtggtggtggtgccaCTTCTCTAGTTGGTGAACTAATGGACAAATTTGGTCTATCGAATATCGCTCAGTATTCCGAAGCTTATAAGCAGGCTCTTCAAGAGTCTGGCAATTTGAAACATTTGGCCAACAAGGAAGCAGCCAATGCTGCTGCCGccgctgcagctgctgctgctgccgataataataattcgaCGCGTTCCCCATTGCCACATTTGAGTGATAAACTAAATGGTTTGCCAGTTGCCGCTCTACGTTTGCGTGATGAATTCGCCAAGAATATGTTTCCTCAACCACCACCGCAACAGGATGCtggaccaccaccaccacaggTGCCACTCTTCAATCCATTCCAAAATCCTTTTGAGCTCTCGAAACGCATTAAGTTAGATGGCAACGATTGGTGGAACATGTCAGCATTGCATCGCAACGATGCCCTTTTTGAGAACCTCAAGTTAAAACCACTTGGTCTAGGCAGTGCAAACTCATTGCTTCAGAATCCAATGCTCAAAAAGGAGAGTCGCCAACGGAATGACACTTGTGAGTTCTGCGGCAAGGTCTTTAAGAACTGTTCCAATCTGACAGTGCATCGACGGAGTCATACCGGCGAGAAACCCTACAAATGCGAATTATGCACATATGCGTGCGCTCAAAGCTCCAAGCTAACACGTCACATGAAGACACATGGACGCACGGGCAAAGATGTGTATCGTTGTCGCTTTTGTGACATGCCCTTCAGTGTACCATCAACACTGGAGAAGCATATGCGTAAGTGTGTTGTCAATCAGGGTAAAGCAGCTGCAGCCGCAGCAAATGCTGCTAATGCTGTTGCAGCCGCCCAAGCGGCCCAAGCAGCTGCCCAACAGCTTCAGGCACAAGCTCAACAATTGGGTACATCACAACAATTGTCTCCACCGTGTTCGTTAGGCTCGTTTCCACCACAATTCGGTGGTGGcggtgctggtggtggtggtatgATTGGTGGCAATAATTTATCATTGCCAAGCAGCATAAGCGGTGATAATGATTCGAATGCCTCCTCAAGTTTGCCAGCTCATTCGATTTCTCTTAAAGAAGAGGCATGA
Protein Sequence: MSLKMILLYSDTTENDAAIAQDILTCGACQKTFALSDIVKFIQHKVLQCNKENYGQCTTQGPTMDRDAEEGRPLSLVNRRPSISAPITNRSKQQQQQQQQQQQQTSSTSTASGSSSTTSGSVSGSSAAAAAAVASGSRIHTPPPSPADLLADGASSTPKRLVDENDNTTPKNSGNGSSNGSDEITTAADSTSASPKSMTPIASTTTAATTTTREDHDDDDDDDGDYTSTTTTTTTARKSETISLRTDDKINQKSSTSTASTTASTSQLIAIKQEQHDDDVLTQHHYDDDDDDDNNDNAHNESSMIETLPKHKTNNDNYAGNANDDKEEHHGQPMRKRPKIEVCDAEANTIHTEPSNYTCSTCKTRYTSAWRLIQHVQHSHGVKIYVESNGATNGALTVATPASLNAAAAAALETGSHSATTSPTISALPIHALMQTSTGSNNSSITSSGAAQKRNTSNNNTSGSSNHSNSNSNSSNNTSINTSGNISCSSNNNSNNNSNANSPSSVALAAAAAVAQQHQQQQQQHLLHQHQQQQQQRAAAAVAAVAAAEQHKAQQHHHQQQQQQQQQQQQQHQHNSLTTAMQNAQNLAAAAAAGMRHHPLLAPPPEAMHANPFNLLRMPLPPALAGQGTVVPSVSPLFTRPHPDHHYRMEQLVSEQFRHHGFNLAAAAVAAANTLAAGPHAAAAAAAAQFNATANGGGGAAQNAAAVVNVPSALIGGAAAIEQRPPSSNSSHRGSVPPAALPPPSLSSQQQQQQQQQQQSSLVSGATSSATSAAGAGVAGASSASNNALNLEPQMDFYSQRLRQLAGTTSPGAGNIVNSSSPSPRQKQSPHFASPSPSMSNTAAAVAAAAAAAAAAAGVTQLPPTTPPVTNSHSNNSHHQHHHSHSHHQQARPQSLTPPEKCGENGSLHHTTPRSASTPPSKPGSQDNSCTGSGSYACNYCDKKFRFENNLIIHQRTHTGEKPYKCTACEFECSHISKLMKHMRVHRSPVEDGASNADSIESNDNDNDDDDSDEHEEDNIEDENMDDEDDDDMEDGEDVDYEAEDLSVSNRIDGKSQSPKTSTNSGGGATSLVGELMDKFGLSNIAQYSEAYKQALQESGNLKHLANKEAANAAAAAAAAAAADNNNSTRSPLPHLSDKLNGLPVAALRLRDEFAKNMFPQPPPQQDAGPPPPQVPLFNPFQNPFELSKRIKLDGNDWWNMSALHRNDALFENLKLKPLGLGSANSLLQNPMLKKESRQRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCTYACAQSSKLTRHMKTHGRTGKDVYRCRFCDMPFSVPSTLEKHMRKCVVNQGKAAAAAANAANAVAAAQAAQAAAQQLQAQAQQLGTSQQLSPPCSLGSFPPQFGGGGAGGGGMIGGNNLSLPSSISGDNDSNASSSLPAHSISLKEEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00061467;
90% Identity: iTF_00061467;
80% Identity: -