Basic Information

Insect: Amiota mariae
Gene Symbol: ham
Assembly: GCA_035041805.1
Location: JAWNKV010000363.1:1255705-1285177[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0065 0.84 11.2 0.0 2 23 334 356 333 356 0.91

2 9 0.57 73 5.1 4.5 1 23 363 386 363 386 0.88

3 9 1e-06 0.00013 23.1 3.0 1 23 392 415 392 415 0.97

4 9 1.5e-06 0.00019 22.6 1.9 1 23 421 443 421 443 0.96

5 9 4.7e-05 0.0061 17.9 5.0 1 23 449 471 449 471 0.99

6 9 0.0011 0.14 13.6 2.0 2 21 479 498 478 499 0.95

7 9 4e-08 5.2e-06 27.6 1.7 1 23 1046 1068 1046 1068 0.99

8 9 3.9e-07 5.1e-05 24.4 0.9 1 23 1074 1097 1074 1097 0.97

9 9 6.8e-05 0.0087 17.4 6.6 1 23 1103 1125 1103 1125 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0065	0.84	11.2	0.0	2	23	334	356	333	356	0.91
2	9	0.57	73	5.1	4.5	1	23	363	386	363	386	0.88
3	9	1e-06	0.00013	23.1	3.0	1	23	392	415	392	415	0.97
4	9	1.5e-06	0.00019	22.6	1.9	1	23	421	443	421	443	0.96
5	9	4.7e-05	0.0061	17.9	5.0	1	23	449	471	449	471	0.99
6	9	0.0011	0.14	13.6	2.0	2	21	479	498	478	499	0.95
7	9	4e-08	5.2e-06	27.6	1.7	1	23	1046	1068	1046	1068	0.99
8	9	3.9e-07	5.1e-05	24.4	0.9	1	23	1074	1097	1074	1097	0.97
9	9	6.8e-05	0.0087	17.4	6.6	1	23	1103	1125	1103	1125	0.98

Sequence Information

Coding Sequence: ATGAAATTTGTTCGCATGTTATTGTGTTTACGCATCTACTTGAGCAATAACGGCGACGATTACGAGCCGGTAcgccatcatcaccaccatcatcatcagtcgTTGCATCATCATACAACAGCTCATCTAGAACTCCCACCACATTTTGGAAACAACCAAGGGACAACGGCAACAACTCATTTGACAGCAACGGCGTCCGTTTTAACGCCGGGTGTAACACAAACAATGGAACCTGATACAACGTCATGCCATGCACAGTTTAATAATGTCAAAAGACGTAAGAGTTTCAAGAATGTCTCACCTACGACACCAGCGCAGAATCGTCATCATCCTTAtctgcagcaacaacaagtgaCGCCGCCATCGCCCACCCCAATGACCCCCCATAcaccaaatttcaaaatggaacatttattaaatgatcATGCACAAGCGGAACGCATACTTATGGAGATGGCACGGCTACGTGAACCTGTCTGTGATCTGGATATACGTGATAATGGCGTCTATGCAAAGGCACAATTGCGTCGGGGCACACGTTATGGTCCATTTCCGGTGAAATTGTGTCAGGAACCCACCGAACGAAGTCTCGCTTGGGAGGTCACTGCTGGTCCACATTTTCATGGGTGGCTAGAACCCAGTGCCGATGTCTCAAAGTGGCTTAAAAAGATACGCGCTGTTAATGTTGATAAAGAAGAGGCTAATCTtaggaattttattattgcgGGTTATCTTTGGTATGAGACAAATCGTGATATTAATGCGGGTGATGAGATCACAATCGATGGTGCACCCAAGCCACCTTATGAATTAAATGAGAATTTTCTTAATGGCGTTGGCACGAGTGCGGCATCATTGCCAAGTGATGATCGCAGTGATCGGGATAATGaaaaccatTACAGTGGTGACGAATatccaaaagaaaaaccaatcCATTTGCGccaccatcaacaacatccTACCAATAACGTTTTCATTGATGAAGACGCTTATGATATACGCTGTGAAATATGTGATAAGGAATATGCTGATTTAGATAGTCTAGATGATCATCTTGTCAATGCTCATCATTTCCAAGCCGACGCTTTTGCCTGTGAGACTTGCCATCAAAGATTTTGTCATCGACCCTTGGTCTTAAAGCATCGTGGATTAGTTCATAACGATATTAAGAAATATCCTTGCGAAAATTGTTCAAAGTCATTCTGTGACACCTCGAATCTACAGCGTCATATTCGTAATACGCACGTTGGTGCTCGAAGTCACGCGTGTCCGGAATGCGGTAAAACGTTTATGAGCTCATCGGGACTCAAGCAGCATATGCATATACATTCCTCGGTAAAACCATTCCAGTGTGAGGTCTGCTTTAAGGCGTATACGCAATTCTCGAATCTGTGCCGGCATAAGCGTATGCATGCCGATTGTCGTCTTCAGATCAAGTGTACCAAATGCAGTCAAAGTTTCAATACACTCACATCGTTAACAAAGCATAAGCGTTTCTGTGACACCGCCGGTGTTGTGgatcaccatcatcagcaacagcagcagaatcATTCTCGTAGTGCTCACTCTCATTATTATAACAACAGCAATCACCAAAACAGCAATCAtaccaataataacaataacagcgCCCTGGATCAACATCTACTTCATCAttcacagcagcagcaacaccagcCGCAGCAAGTGTCCCCAGTTGGATGTGGTGTTGGTAATATGACGACGCCTCCGCATCCTTTCTTCATGTTACGTACAGCGCCACCATTTTTCCCCGGTTTTCCGGCACCCGGCGCTTATGGCTTGCAAAATGTCTTTCCGCCAAGCCCATTGCAAGCCGCCAATTTTCCAATGTTCTTTCAAAAATCCAATCTGGATATTAGAATACCACAACTTAATCAGAACTTAAGTTCACCGAATTCACCGTTCCGGTCGCAACTAAATTTCGACTTAGCGGCGGCTGCCGCAGCAGCAGCGAGATCGGATACCAAAAAGCTCAAGTTGGAAATGGAAGATTTTGATATTAAACCCATGTCAACacatattaacaaatatgaaaatttgaaaagagaAGATGAAGAGCAAGACCAAcaccaccagcagcagcagcaacaacaacaacaacaacgtcgTGCTGCAAAGCAAGGTTCCGATGATGAATCTGAAAAGTTGTTAAAACCGCGAGCATTACCAAAGCGAGAAAATGATTTGGACGATATGGAaaatgatggtggtgatgatgatgaagatcaTGATAAATTATCACACAAAAGTGGCGAGCATCAAACTGAAGATGATCGGaaATCCATTGACATTGTTAGTACGCCGCCAGCTTCCGGAAACAACGAGTCAAATGGCGCTGCTAAGCAAACTGAATTGCCACTGGACTTGAGTGTCACTCGCAAACGCAAAAGTTCGTTGAGTAGCAACAGTGGTTGCAATAGTCTAGGCGCCTTCCTAAAGGAATTTCAAAAAGGCGCCGCCGAATCTATTGCAAGTGCAGCAGAAGACTTCGCTAACgataaacaacataaatttcagaaaatatCCGAAAACCACTTAGCATATGAAGCTGAATCCTCGGCTTCACACCAATCCTTTAAGGGCAGTAGCAGTCCCACTCGTTCAGCTTCAACGCCTGGTCCAACTCCCTCACCATCACCACCGACCAGTGCCGGCGAGTTAAGCTCACTTTCAGAAGGCGCTGCAGCAGCTACTGCAGCTGCAACCTCAGCTATGATCTGTCCACAACCAATTCATCCATATTTTATTCGGGAGTTCTATCGTTCACAGTCATTAGGCGCTGCTGCGGCGGCAGCAGGTTTCCCAACAGGTTCGTATCCTTTTTTAGGCCCAATGGGCGGACGGCCGACTTTTGAACAAGCAGCTGTAGTGGCAGCAACttcagcagcagcggcagcagttAATGGTAATCAGCCAACAACACCAACTCACAACTCAACGACGTcgcatcgccatcatcatagCCATAACCACCACCAGCGCCACCATCAACGAAGTTTGCCGTTTCCGCCCGAATCAAATTTCCGTGATGCTTTGCGAGCCGTCGGTCTCTCGACTAGCGTGCTAGCAGCTGCCGCCGCCTCCGGTAACACTCCGCACAAAGTCAAAGATCGTTACTCGTGCAAATTCTGTGGCAAAAACTTTCCGCGCTCAGCAAATTTAACACGTCATCTGCGAACTCATACCGGAGAACAACCGTACACCTGCAAGTATTGCGATCGTGCCTTCAGTATCTCATCGAATCTGCAGCGTCATGTGCGAAACATACACAATAAAGAGCGTCCGTTCCGTTGTCATTTGTGTGATCGTTGCTTTGGTCAACAGACTAATCTCGACCGTCATCTCAAGAAGCATGAGGCCGATACAACTGGCACTTTTGGGTTTGGTGATTCACCCTCATCTAATGAAGCCGAACGTGATGATTCTTATTTCGATGATATCAGATCATTTATGAATCGCGTCTATACACCATCAAGCATTAGTGTTGCTGATAATGACATCGATGAATTTGCGGGCAGTGATATCGAAAATGAATTAACCAAGTTATCAACAACAAGGCAATCATCATCAAGTGAACCAACACCGACCACACCAACGACACCAACAAATGCATCAACTGATGCAgtaacagaaacagcaacagaagcagcagtaGAAGCAGttggagaagaagaagaagaaggagatgCAGAAGTAGCAGAAGATTTACTCAAGGATGAAGTTataaccaacaataataacaactctGGTGAACCGATTGCGGTAAACGTCTAA
Protein Sequence: MKFVRMLLCLRIYLSNNGDDYEPVRHHHHHHHQSLHHHTTAHLELPPHFGNNQGTTATTHLTATASVLTPGVTQTMEPDTTSCHAQFNNVKRRKSFKNVSPTTPAQNRHHPYLQQQQVTPPSPTPMTPHTPNFKMEHLLNDHAQAERILMEMARLREPVCDLDIRDNGVYAKAQLRRGTRYGPFPVKLCQEPTERSLAWEVTAGPHFHGWLEPSADVSKWLKKIRAVNVDKEEANLRNFIIAGYLWYETNRDINAGDEITIDGAPKPPYELNENFLNGVGTSAASLPSDDRSDRDNENHYSGDEYPKEKPIHLRHHQQHPTNNVFIDEDAYDIRCEICDKEYADLDSLDDHLVNAHHFQADAFACETCHQRFCHRPLVLKHRGLVHNDIKKYPCENCSKSFCDTSNLQRHIRNTHVGARSHACPECGKTFMSSSGLKQHMHIHSSVKPFQCEVCFKAYTQFSNLCRHKRMHADCRLQIKCTKCSQSFNTLTSLTKHKRFCDTAGVVDHHHQQQQQNHSRSAHSHYYNNSNHQNSNHTNNNNNSALDQHLLHHSQQQQHQPQQVSPVGCGVGNMTTPPHPFFMLRTAPPFFPGFPAPGAYGLQNVFPPSPLQAANFPMFFQKSNLDIRIPQLNQNLSSPNSPFRSQLNFDLAAAAAAAARSDTKKLKLEMEDFDIKPMSTHINKYENLKREDEEQDQHHQQQQQQQQQQRRAAKQGSDDESEKLLKPRALPKRENDLDDMENDGGDDDEDHDKLSHKSGEHQTEDDRKSIDIVSTPPASGNNESNGAAKQTELPLDLSVTRKRKSSLSSNSGCNSLGAFLKEFQKGAAESIASAAEDFANDKQHKFQKISENHLAYEAESSASHQSFKGSSSPTRSASTPGPTPSPSPPTSAGELSSLSEGAAAATAAATSAMICPQPIHPYFIREFYRSQSLGAAAAAAGFPTGSYPFLGPMGGRPTFEQAAVVAATSAAAAAVNGNQPTTPTHNSTTSHRHHHSHNHHQRHHQRSLPFPPESNFRDALRAVGLSTSVLAAAAASGNTPHKVKDRYSCKFCGKNFPRSANLTRHLRTHTGEQPYTCKYCDRAFSISSNLQRHVRNIHNKERPFRCHLCDRCFGQQTNLDRHLKKHEADTTGTFGFGDSPSSNEAERDDSYFDDIRSFMNRVYTPSSISVADNDIDEFAGSDIENELTKLSTTRQSSSSEPTPTTPTTPTNASTDAVTETATEAAVEAVGEEEEEGDAEVAEDLLKDEVITNNNNNSGEPIAVNV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00063032;
90% Identity: -
80% Identity: -