Basic Information

Insect: Amiota mariae
Gene Symbol: grau
Assembly: GCA_035041805.1
Location: JAWNKV010000287.1:1-1989[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 2.3e-06 0.0003 22.0 0.3 2 23 315 337 314 337 0.92

2 8 5.3e-05 0.0069 17.7 0.4 1 23 345 367 345 367 0.95

3 8 0.38 49 5.6 4.4 1 23 375 400 375 400 0.90

4 8 0.0013 0.17 13.3 0.9 3 23 407 427 406 427 0.97

5 8 0.0034 0.44 12.0 0.2 2 23 436 459 435 459 0.96

6 8 9.4e-05 0.012 16.9 2.7 1 23 466 489 466 489 0.95

7 8 7.9e-06 0.001 20.3 2.8 1 23 494 516 494 516 0.97

8 8 7.7e-05 0.01 17.2 3.8 1 23 522 545 522 545 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	2.3e-06	0.0003	22.0	0.3	2	23	315	337	314	337	0.92
2	8	5.3e-05	0.0069	17.7	0.4	1	23	345	367	345	367	0.95
3	8	0.38	49	5.6	4.4	1	23	375	400	375	400	0.90
4	8	0.0013	0.17	13.3	0.9	3	23	407	427	406	427	0.97
5	8	0.0034	0.44	12.0	0.2	2	23	436	459	435	459	0.96
6	8	9.4e-05	0.012	16.9	2.7	1	23	466	489	466	489	0.95
7	8	7.9e-06	0.001	20.3	2.8	1	23	494	516	494	516	0.97
8	8	7.7e-05	0.01	17.2	3.8	1	23	522	545	522	545	0.98

Sequence Information

Coding Sequence: atggaatTACAAACATGTCGTCTATGTTTGCGTGGCTCCGAAAAGGCCATTGATATATTCCATTTGGATGAAAATGATTCCAGTATTTCACAAGTgctagaaaaacatttttggtttgagCTCCAACCAGACGATGTCATATCGAGAGTGATTTGCGTAACATGCTGGACACAAGTTACAGAATTCCATCAATTTTATGTATCCATTCAGGAGGCACACAAGCAATATGAGTTGAAGCCACCATTAAAAGTTGAAATCATgtcaaatgcaacaacatgGCCTGAAGAAGTCTTATTGCCAACTGAAGTACTTGCATTGGAGAATACAAATTGCGTTTCAAATCCTTTGGATGAAAATGAATTACCACAGGATATGCTTAAAAGAGAACCGGATACAGGACATGAAACAGAatttggtgatgatgattacgctttacatgatgatgatggtgattttaatgataaaaaggATACAATAAcagacaatgatgatgatgatgattatggtgaCGAAGATTATAATGAAGAAATTGAtgaccatgatgatgatgaggattaTGATGTTGAAgcagatgaagaagaagatgtgaTAGTAACAAGAAgaggaaaaataaatagaacaaaaacaaagtgcaATACAAAATCTAAATCCAAAAAGAAACCATCTTCGAAGACCACTAGAGGGAGAGGCACAGTTGGCTTAATTCGAAAAGTTCAAAAGTTCCCACCATTTTGCAAAGAAGATGAggatttaatcaaaaaatatatcgtTATGGCTTGTGATTTGTGCCTATTCCTAGCAGATAGTTTTGAAGGAATTCGAGATCATTTCAAGGAACTTCATCCCAATCAAAGACCATTTGTAAAATGCTGTGGACGTAAGCTAGGCAAAAGATGTCTAATTGTTGAACATGCACGCAAACATGCAGATCCCGAATACATAAAatgCAAAGATTGCGGTAAGGTATTCTCAAATTCTAGTGTACTTCGGACACATTGGCTTGCTTACCATGTACCAGAAGAGGACTGTAGATATGAATGCGATCAATGTGATAAGCGTTTCTCACGTTCATTATTATTGGAGTTGCACAAGGGTGTCCATGTACCATTTGATGAACGtaaatacatttgcaaattATGTCCAAAACATAATGCCTTCACAACAGATTATCATCTTCAGACACACATTAGTATGCAGCATAGAAAAGCGCCAAATATTTGCCATGTCTGCGGCAAGAAAATACGTGATAAAGCAGTTTTCGAAAAACACGTTCGATTGCATTTTGAAGATAGTGGACCACGTGTTAAATGCCCACGTCCGAATTGCGATCGTTGGCTTAAAGACGAAGATAATCTTAAGGCGCATTTGAGACGTCATAACGACGAAGGTGTCGAATATTTGTGCAATCAATGCggtaaaaattgtaaaaataaacgtGCATTGGTTAGTCATATTCGTTATTCACACACAAATGTCGTTTACACATGCGAGCATTGCaataaaactttcaaaaaagaaattagtCTGAAGgaGCACATGGCACAACATACTGGTGAACCTCTATATAAATGTCCATTTTGCCCACGTACCTTTAACTCCAATGCCAATATGCATTcgcataagaaaaaaatgcatCCAGTTGAATGGGATATTTGGCGTAAAACAAAACGTGGCAGTTCCCAAGCAATTTTACCAAGTGCCCAAGTGGCTCAGGTCTTAAGAGGTCAACAAATT
Protein Sequence: MELQTCRLCLRGSEKAIDIFHLDENDSSISQVLEKHFWFELQPDDVISRVICVTCWTQVTEFHQFYVSIQEAHKQYELKPPLKVEIMSNATTWPEEVLLPTEVLALENTNCVSNPLDENELPQDMLKREPDTGHETEFGDDDYALHDDDGDFNDKKDTITDNDDDDDYGDEDYNEEIDDHDDDEDYDVEADEEEDVIVTRRGKINRTKTKCNTKSKSKKKPSSKTTRGRGTVGLIRKVQKFPPFCKEDEDLIKKYIVMACDLCLFLADSFEGIRDHFKELHPNQRPFVKCCGRKLGKRCLIVEHARKHADPEYIKCKDCGKVFSNSSVLRTHWLAYHVPEEDCRYECDQCDKRFSRSLLLELHKGVHVPFDERKYICKLCPKHNAFTTDYHLQTHISMQHRKAPNICHVCGKKIRDKAVFEKHVRLHFEDSGPRVKCPRPNCDRWLKDEDNLKAHLRRHNDEGVEYLCNQCGKNCKNKRALVSHIRYSHTNVVYTCEHCNKTFKKEISLKEHMAQHTGEPLYKCPFCPRTFNSNANMHSHKKKMHPVEWDIWRKTKRGSSQAILPSAQVAQVLRGQQI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00061414;
90% Identity: iTF_00063060; iTF_00062265;
80% Identity: -