Basic Information

Insect: Amiota mariae
Gene Symbol: -
Assembly: GCA_035041805.1
Location: JAWNKV010000325.1:7931630-7936354[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0062 0.8 11.2 2.6 1 23 174 196 174 196 0.97

2 15 0.00016 0.02 16.3 0.7 3 23 204 224 203 224 0.98

3 15 0.00018 0.023 16.1 0.1 1 23 381 403 381 403 0.98

4 15 0.00037 0.048 15.1 0.7 1 23 409 431 409 431 0.98

5 15 4.2e-05 0.0054 18.0 4.0 1 23 464 486 464 486 0.97

6 15 0.0098 1.3 10.6 1.1 1 23 512 534 512 534 0.94

7 15 0.028 3.6 9.2 1.0 1 23 540 563 540 563 0.97

8 15 0.31 40 5.9 0.3 5 19 574 588 571 589 0.91

9 15 0.00018 0.024 16.0 5.6 1 23 598 620 598 620 0.97

10 15 0.039 5 8.7 1.7 2 23 626 647 625 647 0.96

11 15 1.1e-05 0.0014 19.9 0.3 1 23 656 678 656 678 0.98

12 15 0.0012 0.16 13.5 0.1 3 23 686 706 684 706 0.97

13 15 6.5e-05 0.0084 17.5 0.5 1 23 712 734 712 735 0.95

14 15 0.23 29 6.3 0.1 1 23 745 767 745 767 0.96

15 15 0.0046 0.59 11.6 1.8 1 23 1359 1381 1359 1381 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0062	0.8	11.2	2.6	1	23	174	196	174	196	0.97
2	15	0.00016	0.02	16.3	0.7	3	23	204	224	203	224	0.98
3	15	0.00018	0.023	16.1	0.1	1	23	381	403	381	403	0.98
4	15	0.00037	0.048	15.1	0.7	1	23	409	431	409	431	0.98
5	15	4.2e-05	0.0054	18.0	4.0	1	23	464	486	464	486	0.97
6	15	0.0098	1.3	10.6	1.1	1	23	512	534	512	534	0.94
7	15	0.028	3.6	9.2	1.0	1	23	540	563	540	563	0.97
8	15	0.31	40	5.9	0.3	5	19	574	588	571	589	0.91
9	15	0.00018	0.024	16.0	5.6	1	23	598	620	598	620	0.97
10	15	0.039	5	8.7	1.7	2	23	626	647	625	647	0.96
11	15	1.1e-05	0.0014	19.9	0.3	1	23	656	678	656	678	0.98
12	15	0.0012	0.16	13.5	0.1	3	23	686	706	684	706	0.97
13	15	6.5e-05	0.0084	17.5	0.5	1	23	712	734	712	735	0.95
14	15	0.23	29	6.3	0.1	1	23	745	767	745	767	0.96
15	15	0.0046	0.59	11.6	1.8	1	23	1359	1381	1359	1381	0.95

Sequence Information

Coding Sequence: AtgaataatcaaaattatggCGGAATAAAATGGGTCCACCATCAATCTGTAAGTGACATCGAAAGATCAACGCAGTTGATCGTTGGTGATCGGCACCTTGAAGTCACTGAAATACTGGACAACAATGGCGGCTGCGGCGACGacggtgatgataatgaatttCTCGATAATGATGCTGATACAGACATGGATCAAATGGCTgctgaaaatttaattttcatggCACGCGATGGTCAAATGGTTAGCGAGATTATAGCAACAGATGATACTGTTGTAGTAACTGATGGCAATAGCTCAGCAATAGAACTAGGCCAGGCATTGGTAGTCGGTAGTGATGATTTCGGAGATGTATACGATGAAGATACCCAGCAAATGGTTACCGAGGAGGTAATAACAGGCGATTGGGTAGAACATCAGGGTGAAGAACgtGTTGAAATACCCGCGGATCAAATAATTGTTAGCAATAGTTCTCAGGTTATATTGGATATGGTACAAGATGAATATACAGCATCACGTCCATATCCTTGTGATTTTTGTTGCCGTAGATTTCGTAAAAAGGCAAGCCTTAACAATCATATGATTGCCCATCAAAATGATCGTCCTCAACTTTGTAAGTTGTGTGGTGCACGTTTCTCCAGGCGTACGGAGCTCATGAATCATCTTAAGGCTCATGCAGAGCAGCAATATGCAGATGAAGCTATTCAATCAGAAGcagcatcagttGTTACTTTTGAAACAGAACGACGTCAAATGGATGATCACTACTATGAGCAGGATTGGCAAATGCAAACTGCGAAAACAATTAACTCATCATCTAATTCACAACATGAGTTTTTGGAGAATCTAACTAGCGGATCACCAGCTAGTAGTTCTATAACGGTTTgttcatcagcatcatcaacagcgGTTTCAACAGAGccttcatcaaaatcaacatcgCGAGGACGCATTAGTCGTCTGAAACCCAAAGAGGAAAgacaatatattgtagaacaTAATGCTGCTGGTCCAGTTTCATCGGAAATAAACTACTTGGATTGCCAAGACTTGCAGGCTGCTACTGCTTCTGTTAAATTAACTCAGGAACAATCACCTGCTACTCATCAACCAAATTTCCCCATTTTGGATGAAAGCAAACCGTTTGTTTGCCAAGAGTGCGGTTTGGCATTTGCACGGGAAAAGGCTTTACTATCACATGTTAAGAATCATCGAATTGAATCGCCTTTTGAATGTAATCAATGCAACGAAATGTTCTGGGATTCTAATAGTTTGCAGGAACATCAAAAAACTCATCAGTTTGAAGAGAGCAATTCTGAATTTGATCCTGCCGAGGACGAGGACGAAGGCACACAAAGCGAATCTGAATCAGAGCAACAATTATATGGTGAATTCTATTGTAACCAATGTGGCATATCCTTCCACAGGCAGGACCTATTACGCCGTcatacaaaacaacatttaaaacaGAATTCAGACGGAGCAGAAGCCTCAAGAGCTTCCGCCATAATagtaaatgatgaaaaagatACACATCATTGTTGCCATACTTGTGGTGAGACATTTGCAGAAGCATTGGATTTGCTAGCACATGCTGAAATACATGCAAGATTCCCGCCTTTTAAGTGTGTTCTATGTGGCGAGGCCTTCTTCGAAGAGCAGGCAATCAAACGTCATTTACATACACGTCACCCGCACGAAATGACAACGAATTCTTGCATTTTATGCGGCAAAGAGTGTCGCGATCGTAAAGCTTTAATCAAACACGCTTGGGATCATTCGCGTGAAAAATGTCACTCATGCTCCAAGTGTGGTAAGAACTTCCACAATAAGGCACGCCTGAAACGTCATATGGCCTCACATCGTGACAAATCTGTCACTTGTGACGTTTGTCACGAGGAGTTTCCCGATGGTCGGTCGCTGTCCAATCACCGACACTCGCACAGCACCACATCGTCGGGCAAATTGTTTCCATGCAACGAATGTGGCAAAACGTTTGGTTCACGTAGCTCCCAGCAGATTCATGTACGCATTCATACCGGTGAACGTCCATATGGCTGTCGTTATTGCTGGAAGGCATTTGCCGATGGCGGAACATTGCGCAAGCATGAACGCATTCATACCGGAGAGAAGCCATATGCTTGTTCAGTATGTCCAAGGGCATTCAATCAACGAGTAGTTTTGCGTGAACATATACGTTCACATCATTCTGGCAAGGATGCAAGTCGTGGTACATACTTTTGTACAGTTTGCTCTGCAGATTTGGATACATCCAATGAATTGATTCAGCATCTCATCCAGCACAGTGATACAAATACAGCAAAACAACGACAACCAGTGACTGGTCCCCGCAAGTACAAACGTAGACGAAAATTGCAACCTCATGAAATTGCCCATTTACGTGCCGAGTGCAAAACTGAAAATTGTGGTTCTGATCTTGATATATCTGACTTTGATAtgaataatgttgatgatttgTTGGTAATATCTGATTCAGAATCTAAATCACCACCACGCAAGAACAAGAAATCAGAGaagacaacagcagcaatgaAACGTGGTGCTAATAGTAATGGCAAGAACCATgttagtggtggtggtggtggtggtaagATGATAAAATCGGAATCATCGCAAACTTGTAGCGAATCGACTTCTTATGGCGGCGGCACCACTTTGAACAATAATAACGACTTATCTGGCGGCAAACAACGCCACGAATCAACAAGTAGCAATTCAGATAAATTGTGGGAAACCAAATTTCTGCAAAGGGCAACAAATAATCAAGATGAATTCGACAAAAGTCTATTTAACAATGTGGAACAAGGACTTCAGACAATTGAATCTTTGGttgtgaataataataataatgatacaaCGAGAAATAGTCGCAATAAACGGCGaactaaacaaaatgattGTGGTGCTCAGCGTACACAGGAAATACAACCTACAAGAGTacagacgacgacgacgatgacgacgagcACAGCAGGTAAAGCGTCAAATTCTATGTCGACAACGTCATCGACATCGACGGCAAGAGGAACTCGAAAAAAATCATCGACAACAAAAGCTCAACCTAAGGTGGCTAATACGACGCGACCACGCATGATACATACAGAGAAATGGCGTGCAGAGCCTGGCCAAGATGTCAAGCGTACACGATCGAAAACTTATATTACACGCACTGAAACCACAAATCTTGATTTGTTGcagaaaaaatcaatttcagtAACGACTATTGTTGATGACTATGAGATTATATCGCCTGCAACAGAACCACCAAATCAGATTAGTTCAAGTCCTTTGCACATCAAGCAAgagaatgaacaacaacagaatcatCTGCAACATCATCAGAATCAACTGCAGCACATGTTTGATGCTCATCTATTGCTCGAAACCTCCAGTTTGCGTAAAGAGGCATATGAGAAATTCAATCCAAGTATTGTTAATGATCTCGAAGAGATTCTACGTTCACCTCTGAAATCCGAACGGAATGCAAGGCTACGTTTTACAAGTGAATCATCGACAACACCACAATTTTTACCAGAAGATGATCAgcatttgattaaaattgaacCAACATCACCGGATTTACGTGAAATTGTTGAGAGTCAACGCAGTGGAGGAACATCAGCTCGCACTGCATTGCGGCAGAACAATTCGCATAACAAATATCTGCTCGACACGGAAAGCAACATAAATGGTTCTCGTTCTAGACACAATAGATCAAATGCTaaaacaccatcatcatcatcaacatcttcattatcaatggcgtcgtcgtcatcaaagaaatataataataataacaataatataataagtaacTCTGCCAGAGCAACAAAATCTGCCAATGTGACCTCATCGCCTTCCTCATCATCTGCAGCCAATTCATCGTTTCTCAACTATAGTGTAGATGCATACAATGAAACTGTACCCAATGGCAATACTTCATCAGATGTTAGTTCAACTTTCTTTAACATATCGGAAGTAGTTTCCGCTGCTGATGCAGCCGCTGCTTCTGCCGAAGCGGCAGCTGCCAAACCCCCAATACCTAAGGGACGTCAATTTGATTGTGAAATGTGTTCGGAAGTGTTCTGTGATCGCACTCAATTACTCGAGCATGcacatatacatttttag
Protein Sequence: MNNQNYGGIKWVHHQSVSDIERSTQLIVGDRHLEVTEILDNNGGCGDDGDDNEFLDNDADTDMDQMAAENLIFMARDGQMVSEIIATDDTVVVTDGNSSAIELGQALVVGSDDFGDVYDEDTQQMVTEEVITGDWVEHQGEERVEIPADQIIVSNSSQVILDMVQDEYTASRPYPCDFCCRRFRKKASLNNHMIAHQNDRPQLCKLCGARFSRRTELMNHLKAHAEQQYADEAIQSEAASVVTFETERRQMDDHYYEQDWQMQTAKTINSSSNSQHEFLENLTSGSPASSSITVCSSASSTAVSTEPSSKSTSRGRISRLKPKEERQYIVEHNAAGPVSSEINYLDCQDLQAATASVKLTQEQSPATHQPNFPILDESKPFVCQECGLAFAREKALLSHVKNHRIESPFECNQCNEMFWDSNSLQEHQKTHQFEESNSEFDPAEDEDEGTQSESESEQQLYGEFYCNQCGISFHRQDLLRRHTKQHLKQNSDGAEASRASAIIVNDEKDTHHCCHTCGETFAEALDLLAHAEIHARFPPFKCVLCGEAFFEEQAIKRHLHTRHPHEMTTNSCILCGKECRDRKALIKHAWDHSREKCHSCSKCGKNFHNKARLKRHMASHRDKSVTCDVCHEEFPDGRSLSNHRHSHSTTSSGKLFPCNECGKTFGSRSSQQIHVRIHTGERPYGCRYCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGKDASRGTYFCTVCSADLDTSNELIQHLIQHSDTNTAKQRQPVTGPRKYKRRRKLQPHEIAHLRAECKTENCGSDLDISDFDMNNVDDLLVISDSESKSPPRKNKKSEKTTAAMKRGANSNGKNHVSGGGGGGKMIKSESSQTCSESTSYGGGTTLNNNNDLSGGKQRHESTSSNSDKLWETKFLQRATNNQDEFDKSLFNNVEQGLQTIESLVVNNNNNDTTRNSRNKRRTKQNDCGAQRTQEIQPTRVQTTTTMTTSTAGKASNSMSTTSSTSTARGTRKKSSTTKAQPKVANTTRPRMIHTEKWRAEPGQDVKRTRSKTYITRTETTNLDLLQKKSISVTTIVDDYEIISPATEPPNQISSSPLHIKQENEQQQNHLQHHQNQLQHMFDAHLLLETSSLRKEAYEKFNPSIVNDLEEILRSPLKSERNARLRFTSESSTTPQFLPEDDQHLIKIEPTSPDLREIVESQRSGGTSARTALRQNNSHNKYLLDTESNINGSRSRHNRSNAKTPSSSSTSSLSMASSSSKKYNNNNNNIISNSARATKSANVTSSPSSSSAANSSFLNYSVDAYNETVPNGNTSSDVSSTFFNISEVVSAADAAAASAEAAAAKPPIPKGRQFDCEMCSEVFCDRTQLLEHAHIHF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00061341;
90% Identity: -
80% Identity: -