Amar004147.2
Basic Information
- Insect
- Amiota mariae
- Gene Symbol
- bab2
- Assembly
- GCA_035041805.1
- Location
- JAWNKV010000187.1:1210336-1212143[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.3e-18 2e-14 53.9 0.0 1 43 59 102 59 104 0.95
Sequence Information
- Coding Sequence
- ATGATTGAAAGCGGCGGACATCCTTGGATTAGTGGCGGAGCAACAACTTCATCTGTGGCGGCAGATAGCTATCAGTATCAATTGCAATCCATGTGGCAGAAATGTTGGAATACGAATCAACAGAACCTTGTGCAGCAATTGAGATTTCGTGAGCGTGGCCCATTGAAATCATGGCGACCGGAAGCTATGGCTGAGGCCATATTCAGTGTGCTTAAGGAGGGTCTGTCCTTATCGCAGGCTGCCCGTAAATACGATATACCGTATCCGACATTTGTGCTCTATGCAAATCGTGTGCATAATATGCTGGGACCCTCTCTGGATGGTGGCACTGATCCAAGACCGAAAGCACGTGGACGACCGCAACGCATATTACTAGGCATGTGGCCAGAAGAACTCATCCGTTCAGTGATCAAAGCAGTAGTCTTTAGAGATTATCGGGAAATCAAGGAAGAAATTGCTGCCGGTCATCCATATGCCAATGGACAAGGTCATGTGTCTCCTTTTGGTCCTTCGGTTGGTAGTTCTGCAGCTGCTGTTGCCGCTGCTGCTAATGGTTATCACAATGCAGCCAAGTTGAATGCTGCACTTGTGCCACCTGATGCCAATAATTCTCCGCTCTCATCGATGACTGAGACCTTGCGTCGTCAGATACTTtcgcagcaacaacagcaatcgCCCATGCCACAATCAATGAACATGTACAAGTCACCAGCCTATTTGCAAAGATCAGAAATCGAAGATCAAGTATCCGCCGCCGCTGTAGCTGCTGCCAAGCAACAGCAGAGCGAACGTCGTGGCTCAGAGAATTTACCAGATTTGAGTGCTTTGGGTCTTATGGGTATTCCTGGTCTCAATGTCATACCAACATCACAGCGAGGTAGTGCTGGTGGTAGCGGTCAAATGCATCCGAGTGCGGCGAGCTATGCACGGGAACGTGAGCGTGAAATGACGCGTGAACGAGAGTTAAAGGAAGCAATGCAAGCCCGTCAATATGGTAATCAATCACGTGGCTCCAGCTCTTCTGGTGGTGGTGCTATTGCTGGTGCCAATCAAAAGGCAGGTGCTTCCTCATCCGCTGGTGGTGCCGCTTCGCCCTTCTCACTTTACAACAAACACAAGGAGCATCCAAATTATGCTTACAACAAACGATTCCTCGAAAGTTTGCCACCCGGCATTGACTTCGAGGCAATCGCCAATGGTTTCTTACAAAAGTCCGTAAACAAGAGTCCACGTTTTGAGGATTTCTTTCCGGGTCAAGATATGAGTGAACTCTTTGCTAGTGCTGAATCAGCGGCCGCAGTGAACGCTGCTGGTGGAGCCGCTGGCGGTTATCCAGGAGCGATTGGCGGCAGTGGTATACGTGAATCGCCActtatgaaaatcaaattggaacaacaacaagcagctGAAGTGCCACATGAAGATTAA
- Protein Sequence
- MIESGGHPWISGGATTSSVAADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSLDGGTDPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEEIAAGHPYANGQGHVSPFGPSVGSSAAAVAAAANGYHNAAKLNAALVPPDANNSPLSSMTETLRRQILSQQQQQSPMPQSMNMYKSPAYLQRSEIEDQVSAAAVAAAKQQQSERRGSENLPDLSALGLMGIPGLNVIPTSQRGSAGGSGQMHPSAASYAREREREMTRERELKEAMQARQYGNQSRGSSSSGGGAIAGANQKAGASSSAGGAASPFSLYNKHKEHPNYAYNKRFLESLPPGIDFEAIANGFLQKSVNKSPRFEDFFPGQDMSELFASAESAAAVNAAGGAAGGYPGAIGGSGIRESPLMKIKLEQQQAAEVPHED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00890895;
- 90% Identity
- iTF_00062686;
- 80% Identity
- -