Acom017037.1
Basic Information
- Insect
- Amiota communis
- Gene Symbol
- nfxl1
- Assembly
- GCA_037043315.1
- Location
- JBAMAV010001125.1:12709342-12712506[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 3.3e+04 -8.1 6.4 15 19 155 159 154 159 0.82 2 19 0.13 2.1e+03 -0.3 0.4 4 10 190 196 189 196 0.95 3 19 1.6e-08 0.00027 21.7 13.9 1 18 204 220 204 221 0.98 4 19 0.5 8.3e+03 -2.2 1.5 5 10 246 251 246 251 0.94 5 19 0.022 3.6e+02 2.1 13.6 3 18 258 272 257 273 0.94 6 19 0.093 1.5e+03 0.2 0.6 5 10 297 302 296 302 0.95 7 19 1.1e-06 0.018 15.9 10.6 1 19 308 326 308 326 0.99 8 19 1.3 2.1e+04 -3.5 0.4 1 8 351 357 351 358 0.59 9 19 1.3e-08 0.00022 22.0 9.8 1 18 361 378 361 379 0.97 10 19 0.3 5e+03 -1.5 0.4 1 5 388 392 388 397 0.75 11 19 2.2e-07 0.0037 18.1 16.7 1 18 413 430 413 431 0.97 12 19 3.8e-08 0.00063 20.6 14.5 1 18 440 457 434 458 0.90 13 19 4.1e-05 0.67 10.9 7.1 10 18 504 512 501 513 0.90 14 19 0.0013 21 6.1 4.8 1 11 525 534 525 535 0.95 15 19 0.86 1.4e+04 -2.9 1.4 6 10 586 590 585 590 0.88 16 19 1.3e-05 0.22 12.4 5.4 1 12 596 607 596 607 0.97 17 19 0.02 3.4e+02 2.2 16.4 3 19 636 652 635 652 0.92 18 19 2 3.3e+04 -5.5 2.1 9 13 658 662 657 662 0.72 19 19 1.6e-06 0.026 15.4 13.3 1 18 703 722 703 723 0.89
Sequence Information
- Coding Sequence
- ATGGAGACtagaaaaaaagcaaacaatgttgataataaatttatggaaatacaaaacagaaatacGAAGGCAATACAACGATTGGCAGCTGAGTACACCTCAAGTTCTGAGGACGAAGAACTAGACGAAAAGACAATTCTGGATGGGCTTTATAAACATTATAAACTTGTGTCGTCATCAAAtgatacaaataaattgacaaaaacaTCAACTTTCTTGGAAAATAGTCTTCACTCTGGTGCTGCATCCTGCCTAATATGCATTGGGAGTATTCGCAGAAACGAATCTGTATGGTCATGCAAGGACTGTTATTGTCTTTTTCATCTTGACTGTATTCGCAGATGGGCTAACGATAGCATCAAGCATTTAAAAGTACGATtggagcagcaacaacatgatCGGGGACATTATGTTGACGGAGAATATATTCCTCCAAAGCCTAAAGGTGCCCCCCATTGGTGTTGCCCCCAATGTCGCCATGAATACAAACCAAATGAAAGGCCTGAGCAATACGAGTGTTTTTGTGGCAAGGAACTTGAACCGAAGCCACAGCCTTTCCTTGTTCCTCATTCATGTGGtgaaatttgtggaaaattgCTTCAGCCACAATGCGGACATAATTGTATGTTACTTTGTCATCCCGGGCCCTGTCCCCCTTGTGCACAGTTTGCTACCAAATCGTGCCTCTGTAGTAAGTCCGAACCAAAATCAGTTCGTTGCTTAGACAAGAATTGGAAGTGTAAAGAATTGtgcCGAAAAATTCTTCCTTGTAAACATGTGTGTAACGAGATTTGTCATAAAAATTGTCCACCTTGCGGTAGAACAAGTGAACAATCTTGTGAGTGTGGTCAACAAGTTATGAAGCGACTCTGTTCGAACTTAAATTGGAAATGTCAAAAGGTATGTGGCAAAAAGTATACTTGTGGTATTCATGTTTGTAAGAAAGTTTGTCATGCGGACTCTTGCGGTGAATGTCCACTGGGAATGCCAAGAACTTGTCCATGTGGTAAATCGAGTAAAATTGGTCCGTGTACTCAAACGATTGAAAATTGTGGAGATACATGtcagaaattattaaaatgtggAATACACACTTGTGTTCAACGATGTCATCGGGGTGAATGCAATGTGTGCTTgacaagaataaaaaagaaatgccgTTGCGGAATGCATGAGAAGGAGTTACCCTGTTCAAAGGAATTCCTTTGTGAAACTAAATGCAAACATATACGAGACTGTGGCAAACACGCTTGCAATCGAAAGTGTTGTGATGGCGAGTGCCCTCCATGTGAAAAGATATGTGGAAAGCAGCTTTCTTGTAATAAACACAAATGTCAATCAGTCTGCCACAATGGTCCATGCTATCCTTGTAATCTGCAGTCTCAGGTAAATTGTCGTTGTGGAAAAACTCGGAAGAATGTACCATGTGGTCGGGAACGTAGTTTTAAAATCGTTTGCTTAGAACTTTGCCGGATAACATCAAAATGCCATCATCCAACTACCCATCGTTGTCATAAAGGCGAATGTCCACcatgtaataaaaaatgtggTTTACCAAATGATTCCAGTGGCTGTGGTCATAAATGTATGGCAAATTGCCATGCAGCGGTTCGAGTGACATCCTCAGTTTCGCATCCAAAAAAGtatGAATATAAATCACTGCCCCATCCACGATGCGAGGAGAAGGTTTTAGTAAATTGTATTGGCGGTCATGAAATCTGCAAATGGCCTTGCTGGAATTCGAAACCATCCTCATGTCAGCGCAAATGCAATCGAAAACTCTTATGTGGAAGTCATAGTTGTCAGTTAGTGTGTCACTCTGTCCCAGACATTCAGGATAACAAGCAACAACCCGGTTGTGCTGGCTGTGAAGAAGGTTGTAACTTACCTCGTCCATTGGGTTGTACACATCCTTGTACTAAGACCTGTCACCTACCACCTTGTGAGCCTTGCAAAGTTaatgtgaaaacaaaatgtcATTGCGGACtaacacaaatattttataagtgCACCGAATACTTTGCTACAGCAAATTCTGAGCAAGAAATTCAAATACGTCAGGAGCAATTAAAAAGTTGCGGAAATCGCTGCCTAAAAAATtttCCATGTGGTCATCGCTGTACTTCAAAATGTCATTCAGGAAAATGTCCCAATCCGGAATCCTGCcgtaaaaaagtaaaaatatattgtttatgCCAAAGATTGAAACTGGAAGTAAGTTGTGAAAAAATTCGTATGGGTCAAGTTGAATTATCATGTGACGAACACTGCCTGGCTGAACTTGAAAAAGCTGAGGAAATTGAAAAGAAGCAACTGAAACAGATGCAAACTGAAGAGGAGATCAAAAATCAACTTGAATTAGAACAATTCGAGAAGAAATTTGGAAAACGAAAATACAAAGAACGCAAAGTGCTAGCTAAACAAGTTAAGACTTCGATTAACTGGAAAATTATATCAATCTATGCTGGCATTGCAATAACCATTTTATTAGCTCTGGCTGTCGCACTTTATGCTGacaattga
- Protein Sequence
- METRKKANNVDNKFMEIQNRNTKAIQRLAAEYTSSSEDEELDEKTILDGLYKHYKLVSSSNDTNKLTKTSTFLENSLHSGAASCLICIGSIRRNESVWSCKDCYCLFHLDCIRRWANDSIKHLKVRLEQQQHDRGHYVDGEYIPPKPKGAPHWCCPQCRHEYKPNERPEQYECFCGKELEPKPQPFLVPHSCGEICGKLLQPQCGHNCMLLCHPGPCPPCAQFATKSCLCSKSEPKSVRCLDKNWKCKELCRKILPCKHVCNEICHKNCPPCGRTSEQSCECGQQVMKRLCSNLNWKCQKVCGKKYTCGIHVCKKVCHADSCGECPLGMPRTCPCGKSSKIGPCTQTIENCGDTCQKLLKCGIHTCVQRCHRGECNVCLTRIKKKCRCGMHEKELPCSKEFLCETKCKHIRDCGKHACNRKCCDGECPPCEKICGKQLSCNKHKCQSVCHNGPCYPCNLQSQVNCRCGKTRKNVPCGRERSFKIVCLELCRITSKCHHPTTHRCHKGECPPCNKKCGLPNDSSGCGHKCMANCHAAVRVTSSVSHPKKYEYKSLPHPRCEEKVLVNCIGGHEICKWPCWNSKPSSCQRKCNRKLLCGSHSCQLVCHSVPDIQDNKQQPGCAGCEEGCNLPRPLGCTHPCTKTCHLPPCEPCKVNVKTKCHCGLTQIFYKCTEYFATANSEQEIQIRQEQLKSCGNRCLKNFPCGHRCTSKCHSGKCPNPESCRKKVKIYCLCQRLKLEVSCEKIRMGQVELSCDEHCLAELEKAEEIEKKQLKQMQTEEEIKNQLELEQFEKKFGKRKYKERKVLAKQVKTSINWKIISIYAGIAITILLALAVALYADN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00063262;
- 90% Identity
- iTF_00063262;
- 80% Identity
- -