Acom014669.1
Basic Information
- Insect
- Amiota communis
- Gene Symbol
- -
- Assembly
- GCA_037043315.1
- Location
- JBAMAV010001076.1:426140-439888[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.61 73 5.0 1.1 1 23 1983 2006 1983 2006 0.92 2 8 0.018 2.2 9.7 0.1 1 23 2011 2034 2011 2034 0.97 3 8 0.15 18 6.9 2.4 1 23 2301 2324 2301 2324 0.94 4 8 2e-06 0.00024 22.2 0.7 1 23 2333 2355 2333 2355 0.98 5 8 3.9e-05 0.0046 18.2 1.3 1 23 2362 2385 2362 2385 0.98 6 8 2.9e-05 0.0034 18.6 1.4 1 23 2391 2413 2391 2413 0.97 7 8 8.7e-06 0.001 20.2 0.7 1 23 2418 2441 2418 2441 0.97 8 8 8.3 9.8e+02 1.4 1.2 1 23 2447 2469 2447 2469 0.93
Sequence Information
- Coding Sequence
- ATGTTTGGGGAGCCCGTAAATGTGCCCTGCCGTAAATCCGGCCTTGTTACACAACAGAGTATGATACGACGTGACGATGGTTTGCCACAGGATATATGCCGTCAGTGTACCGCACAATTTTACATGGTGCATAAATTCCGGCGCAAGTGCCTTAAAGTGCAAGCACGTCTACAGCGTATGTGGGAAcgtgaacaacaacaaaagcaaccacaacaacaccaacagaggcaacaaacaaaacaaaaacaacaagaacaacaggatcaacaaaaacaggaacagaaacagcaacagcaacagcaaccgAAACCCAAACAAGTGGGACCACAACAAAtggctaaaaaaaaagaagttgaTGACAAAATGATGGTGGAGAAGGTAATGGATAAAGAAAAGCTTCTTAATCTGGCGGCTTTGGAAGAACAAAAGCCAATTGTAGAAGGTGACACATTAGTGGATTTCATAGATGAAGAAAAATTGCTAAAGGCACACAAGATTTATAAACAAAGTCTAGATGCTAAGTGTCGTACTCGCCATAGTTctccaaatacaaaaaagaataatagaaCAAAAGAAGACAACTCGAATGAGGATGAAAGTAAAAAGCAGCACTCAACAAATCTTGCTATGTGCGCAGGCGCCATAGTAACACCAAAAGAGAATGATACAAATGCTTTAACCTCCTTCGCATCTTCCTCCTTTACCAATACATCCTTTTCCTcctcaccatcaccatcatcatcatcatcgtacTCATTCTATAAACAGGAAGGAGTAAAACATGAGACTGAAAAACACTTTACACCTGAAACAAAAACTACTAATGGTGAAGATGATGGTTGTGGAGATGGAAATGGCGATGAAGATGGTGGCgccgacgacgacgacgaggATGACTACAGCAATGACGACACTGGTGGCAGTGGCGCCGACTGTGGCGCCGGAAGTAGGAAACGCAAACTTACACAAATCTTGCTTAACAACTCCTCCTCACCCAAATGTGAACTCGTGTCCAATACGTTTGTAAAGGCCATTAAGAGAATACGACAACAACGTGATGTTGGCTCCGGACTCCGGACAAAAGGTAACGTGCGAACACGTTCAATGACTAAGTTAGAAGAGCAGACAACAACGACGTCGCCAACAACTTCAACGACGGCAACTACGGCGTCGTCGACAGCTATGACAATGATGGAGGTTACTGAGGATTGTAGCAATGATGATGCATCATCTGTgccggttgttgttgtaactaGTGGTGGATGCAAAGTTGATGAGAAGTTGACgacagaagaagaaatagaAGTAATTGCGGAAGTTGCAACAGCTACAACCACAGGAGAAAGCAATGtttcaacaactacaacaccaacaaaGGTAACAACAGAAAGAATAAGAGAAAGAACAACTTCAATGAATGAGGATGAAGAGGAGGTGCCATCTTCACCAAAACGTGCCAGATGTGCAATAAACGACCAGGAGGATGAAGTAAAATTACCTTGGAAAACCAAAGCTGCACGAAAAGAGATACCAATTATAAACTCTGACACTTCTACTCCATTGGATGCATCATCAACTGAGGAGAAGTCCTTGTCCTTGTCATCTTCGTTattatcaacatcagcatcaccaGTGCCACCAACCAAAGCAGAGGTAGAGGAAGAGACAAATGGTGATGCTGCTATTAAGCTTAATGATGTTGCTCCTAAAGCAATTACCACAGAGACAACAGCGGaaacaactaaacaaaatgGTATTACCGCAACCACTTCAccttcatcaacatcatcatcaaattctTCACCCTCTTCTAGTAATGagagaaaaaaagtaaatgcATTACACAgaggcggtggtggtggtgctagTGGtcgaaatcataaaaataagttGCACAGAAGTAAAAGCGGAAGATTTATTAAGCGAGAAGAATATGCATTGATTAGTAGGCGTCAACAAGGTGGCAACAACACTCGTGTTGTGGTAGGAGATGACAAGTCTGATATAATTAAAAAGGAAGAGGTGTTATTGTGCtgtttaaatgaaacaaaaaccaacaaccaaccaagTGAACATCAaaagacgatgatgacgacaaacGAGATTTGGGACCAtgttaaagaagaagaaacacaaaaaacttttcaaagtagtgatgatgttgttggaCACCATACTTCACTGAATTGTGCTGAAAAGCAAAAAGTTGTTACTACTGTTgttcaacaacagcaacaacaacaacaacaacaacaacaagaaccaGAACAAATGGAAGTCGAAATCGTTAAGTGCCAAAAAGCTGAAAAGCAAGAAATTTCCGTGCCGGTGATGGAGGTTTCTAAATCACTAGAGGAAACAACATATAACAACACCAATACCACCACCAATACCACCACCAATACCACCACcaataccaccaccaccatcagcaGCACCATCAGCAACCGAATCAATGTTGATAATACAGAAAAGGAATGCATTGATTGTAatgctgctactactactactactagtgcTGCTGTTAGTAAAGGAATCAGAGGACTAGAAAATGGTGTTACCCTAGAGACAGAAAAacagcataaaaataaaaaaccaaccaTTGATGtagttgctgctgttgatagAAATTCAGACAACAAAGCTTTAAAGACCCAACAGACACCTGCGCGAATTGAAAAAGTAACAAAGGTAGAAAAGGCAGCAACAAAATCACACAAACGCCAGAAAAAGCAGCAGAAACATCCTGAAAATGGGACCTCCAATGCAAAACACAAAGcatcaataacaacagaagTAGCAAAAATAGTCGATATAGTAGTTGATGTAGATGTGAAAGAAATAGTGGTggaaaaagaagacaaagtgATAATGGTAAAAGAAGAACCAAACAGTAGTAAAATGTTGGCAACAGCGGCACCGGcggcatcagcagcagcagcagcagcagcagtgaataaagaaaatgtagaTAAAGGTATTAAGGTAAGCATACCATTATCTCGGTTGAGTGAAGACTTTAAGAGACAACTACatttgcagcagcagcagggcATTGATATTGATGGTGTTGTCAATGATGCTACTGATGCTACTACCTCTGTCATTGGTGCTAATGTTCTTGCTGCTACTCATGCTACTGATGATGCTGCTAATATTGATCCAAATACAGAACTAAGCAGCATGCTGCCATTGCCGCTTACTAATAatactgctactactactactactactagtataatATCGCCTAATCAACTATTAGAGCTTAACAATAAAGAGAATGAACTCAATAGTAacaatgatgaaaattttcaGCAATGTGCTGTAATAGGAAGCAACTCCTCCAATGCCGTTACAGCACGTGATAAATCTGATATCATTGGAGAAGAAAgagtagcagtagcagtagcaacagcagatgatgataaaacaattgtgatgatgttgaataATGACGATGAAAAGGTAGAACTGGATAAAACTATGTCATCAGATCAAAGTGAATACTTTAGGTTTCCACCAACTTTCGATGGAATGCATACTGATGACACAATTGTTGACAAAGTGGTGGTGGATGATGAAGAATGCTGCACAGGAAAAGTGAATGAATTATTTGCTGAACTTCAACGTCATTGTGAAAGCAATAGtaatacaaatcaaaattcaaatgataaTGTTTCAAATGATATCGTTGTCAATGATgttggcaatgatgatgatgatgatgatgatccaaTGGCTTCACCAAAGGTAGATAGTAGTAATAGTCTATTGGATGCTGATGAAATGAATTATGTTGAGAGTACATTGAATGGCATACTAAATGAAATGCAAGATCAACATATTTATACACCAGTTTCGGATTTCCTTGAGCCATCAGATTATTCACCTCTAACACCAGGACATAGTCTACACCAGGAATCAGCATCACCGGCTGAtccatcaacagcaacaacatcagagGCAGGTAGCATATATGTACCAAGTCCTGGGGGTAGTATATTAATGACAGTTAATAATGGTGGATCACCATATGCTGagcatcatcaacaccaccaacagcagcagctgcaacagcatcatcaccttgagcaacaacaacaacagacgaATACAATTTGCATTCAACAACagaatggtgatgatgaagaggGTGATGCTACCACACAACGAGCAATTAATGAATTCTTTGGTGAAGCTTTCAATAATTACGAACAAGTCTTTACCGATAATGATGCCAATGATGCAGTTCCAACCAATTTGATTGGCTTTCAAAATGATATACCTTGTTTTGAGACAAtgtcgacaacagcaacagcacccAGTTCTCCACCACCTTTGGCACTCATCAAACCAACAAAATTACCATCTCTACCATTGCCACAAGCAATGCGTAGTGGTCGCACTCTAACTGATCTCATTCAATTGCCTTCAAGTGCTGCACAAAATATGCATTTGATGGCAACTGGTACAACGGGGGCTGCCAATCAAATAACAACACCACCAATTACTCTAAATTCAgaacagcagcaccagcaccaacaACTCCAACACCAACCAATATATGTGCCAAATGCAGCTGCTCTAACACCATCTAATGGAGGAGGagtatcagcagcagcagcagcaacattacCATCAAATTTGCAATTAGAATTATCAGAATTATTGGATGAATTGCAGCAACCCACAACAATaatagaacaacaacacctacatcaacagcaacagcagcaacaccaacaacagcagcagcagcatgagcaacaacaacaacagcaacaattgctTAATGCTACTTTTTGTAGCAGCAATGCTACATATACTACAACACACCTTCAACCGGTATTGGATGCTAATTCTGCCGCCAAATTACAGTTTATAACATTACAAACGCCACCACCATCTGTCAATAACTCTAATGACCTTAGTGCCTCCCCATATCATCTTCACCATCATACACATCCGCATTCACATCAATTTGCTCAACAAACACTGCCTTCCCTGCAGCACACACAACTTCAATGGTCTGCTGCTGGTGGTTTGGAAGCTATTAAAGCTACAACGGAAACTTTGTCAACACCGGTTGATGGTactacgacaacaacaaccacttACTATATAAATGCCACCGAATTGTATCAAACAAATCAGCAACCAGCTCAATTACAACAGACGACAACACATCATTACCTTGAATTGGACAACAAACGCACTTTAGATggcaatgaaaattatttagagACAAATAATGGAGGGGTTGGTGTTGGTGGACTAATTGGTGTTGGCGGTGGAGGTGTAGGTgtaggtggtggtggtggtgcagCAACAGTtaacaatcaacaaataatgatTGTTATACCACATTCATcaagtggtggtggtggtgttggtgcaGGAGGCACAGCAACTTTAGCACCAACATGTGCTATGGATATGAATAATCCTGTTGCCTCTGCAAGTAATCCTCATCAAGCACCATTACAAATTTATGGTACGACAACGGCAGCACCACCCACCATAAGTAATGACTTGCATACATCGTTACATGAACATCATCAGCAGTCGGCATTTTTATtgcaccagcaacaacagcagcagcagcagcgtaACCATGGCAACGCCATAATCAACACCAACACCGCCACCAGCAACGAACCATGTACAACAAATGTGTatatggcaacaacaacaccccTGCCGGAATCATCACCAACTGGTATACAATATACGTTCTCATCATTGTCACCCATTTTGCATCATCAAACCCCAGTGACTCCTCCTATGACACAGTTGTCGACGTCGTCACCCCCACAAACGCAAACTGGTAAAGCTCCGGCGAATCGCATAAGTCTTAACTGTCGGTTCTGTCATAGTCGTCCGCGTTTCACCAACAATCTGGAGTACAGCAAGCATATCATTGCAATGCATCCGGCAGAGGCACCCTTCAATTGTCCACACTGTCCAATGTTATTTAATGGCCGTACCAAGCGACAACAACACATTATCGAGCAACATTTCAGCCGACGTTTTTCATGTGGCCAATGTGGCCAAGCATTTCCGGCACAACGGGCACTCGACTTGCATTTACAACGTTATCATGCACTGGTGGATACTAATAATGTGACACAACAAAGATTGGTATTGCAACAGCcacagcagcatcagcatcaggaACAACACCACATTCAACAACATGgcattggtggtggtggtgttgatgTAGAGGATGTACAACTCCACATGAATGATGAGGGACATTGTTcaAATGATGGCCCTGTAGAGACAATCAACGGCAGTGCCAGTGGACCTAGTGATAGCATTATGAACAGACCAGAACAGACCAAAAAACATACACGCATCCTATGCTGTCCCGATTGTGGTGATTtGAACTCTACTGAACATCATGGCCATCATAGTCAACAACAGCGTTGCCCAACAAAGCTTAGTGTTGCTGTTCATGATGAACTCGCGCCATCACCAACAGCCATGAATGCAataacagcagtagcagcaacagtagcCACCTCCATTTCACCAACATCAAACCATACGCCGCCGCCGCCCACATCAATGCCAACAATTggaaatgcaacaacaacagcaacaacaacaacagcagcagcacaagGGATTACAACTAACAATTGCAATACTAATAGTCCCATGGCTGCTGGTGCACATATAACTCTACCATCACCAGAACAATCTGAACCAGattcaacatcaacatcaactttACGTCAATTTCGTCGACGACGAATTTCACCCTCAccatcgccatcaccatcaccatcattattatcatcgtcatcaccatccATATCACAGTCACCatcttcatcaccatcatcgtcCACAATGTCCGATGCTATGCAATTGGGTGAACTTCGTAGCACACATAATTGTGTCTATTGTACAGCGCGCTTTACAAATGATATAGCATTGCGTAAACATCATCAGTTGGCACATCGTGACCAAAACACAACGATGCCATTCGTTTGTTCGATTTGCAATCGTGGCTTCCGTACGCGTACCGCATTACAGCGACATATGGAATCACATAACAGTGAAGGTCGACCATTTGAGTGCGATACCTGTCATGTACGCTTTCCCAGACGATCACAACTCCGGCTGCACATCCTCACTGTACATATGTTATCAAAACCGCATACATGTGAGGAATGCGGCAAACAATTTGGTACCGAGAGTGCACTGAAAACACACATCAAATTCCATGGAGAACGATTATTCGAGTGTCCCGTATgcaatataagtttttcacTTAAAAGAGACTTACGCAAACATATACGACAAAGACATACGGGCGAGAAATTTTACAAATGCGATTTGTGCCCGgatacatttttacattattcACGTTATAGCGCACACATTAGTGGACATTTTCCGCCCATAAATTCAACCGATTCATCAACAACCATATTGACAACTACTAAAGAAGATATAGACAAgatgacaacaacgacaacttCTCCAGTGGAAAGTTTATTAAAAGTCGTTGATTCAATTACTCATTTGCCAGAGCTTATAATGCCACCAACACCAAATCCAATGGAAACTCTGGAACATGAACAACATAATGTTGAAgttaacaaacatataatacCAACACCTGCTTTAAAAGATAATCTTATTAATGTCGATCCACCGTtaactgctgttgctgtgatGTCCTCAGATTCTAGACTATTGGATTCTGatcataataaataa
- Protein Sequence
- MFGEPVNVPCRKSGLVTQQSMIRRDDGLPQDICRQCTAQFYMVHKFRRKCLKVQARLQRMWEREQQQKQPQQHQQRQQTKQKQQEQQDQQKQEQKQQQQQQPKPKQVGPQQMAKKKEVDDKMMVEKVMDKEKLLNLAALEEQKPIVEGDTLVDFIDEEKLLKAHKIYKQSLDAKCRTRHSSPNTKKNNRTKEDNSNEDESKKQHSTNLAMCAGAIVTPKENDTNALTSFASSSFTNTSFSSSPSPSSSSSYSFYKQEGVKHETEKHFTPETKTTNGEDDGCGDGNGDEDGGADDDDEDDYSNDDTGGSGADCGAGSRKRKLTQILLNNSSSPKCELVSNTFVKAIKRIRQQRDVGSGLRTKGNVRTRSMTKLEEQTTTTSPTTSTTATTASSTAMTMMEVTEDCSNDDASSVPVVVVTSGGCKVDEKLTTEEEIEVIAEVATATTTGESNVSTTTTPTKVTTERIRERTTSMNEDEEEVPSSPKRARCAINDQEDEVKLPWKTKAARKEIPIINSDTSTPLDASSTEEKSLSLSSSLLSTSASPVPPTKAEVEEETNGDAAIKLNDVAPKAITTETTAETTKQNGITATTSPSSTSSSNSSPSSSNERKKVNALHRGGGGGASGRNHKNKLHRSKSGRFIKREEYALISRRQQGGNNTRVVVGDDKSDIIKKEEVLLCCLNETKTNNQPSEHQKTMMTTNEIWDHVKEEETQKTFQSSDDVVGHHTSLNCAEKQKVVTTVVQQQQQQQQQQQQEPEQMEVEIVKCQKAEKQEISVPVMEVSKSLEETTYNNTNTTTNTTTNTTTNTTTTISSTISNRINVDNTEKECIDCNAATTTTTSAAVSKGIRGLENGVTLETEKQHKNKKPTIDVVAAVDRNSDNKALKTQQTPARIEKVTKVEKAATKSHKRQKKQQKHPENGTSNAKHKASITTEVAKIVDIVVDVDVKEIVVEKEDKVIMVKEEPNSSKMLATAAPAASAAAAAAAVNKENVDKGIKVSIPLSRLSEDFKRQLHLQQQQGIDIDGVVNDATDATTSVIGANVLAATHATDDAANIDPNTELSSMLPLPLTNNTATTTTTTSIISPNQLLELNNKENELNSNNDENFQQCAVIGSNSSNAVTARDKSDIIGEERVAVAVATADDDKTIVMMLNNDDEKVELDKTMSSDQSEYFRFPPTFDGMHTDDTIVDKVVVDDEECCTGKVNELFAELQRHCESNSNTNQNSNDNVSNDIVVNDVGNDDDDDDDPMASPKVDSSNSLLDADEMNYVESTLNGILNEMQDQHIYTPVSDFLEPSDYSPLTPGHSLHQESASPADPSTATTSEAGSIYVPSPGGSILMTVNNGGSPYAEHHQHHQQQQLQQHHHLEQQQQQTNTICIQQQNGDDEEGDATTQRAINEFFGEAFNNYEQVFTDNDANDAVPTNLIGFQNDIPCFETMSTTATAPSSPPPLALIKPTKLPSLPLPQAMRSGRTLTDLIQLPSSAAQNMHLMATGTTGAANQITTPPITLNSEQQHQHQQLQHQPIYVPNAAALTPSNGGGVSAAAAATLPSNLQLELSELLDELQQPTTIIEQQHLHQQQQQQHQQQQQQHEQQQQQQQLLNATFCSSNATYTTTHLQPVLDANSAAKLQFITLQTPPPSVNNSNDLSASPYHLHHHTHPHSHQFAQQTLPSLQHTQLQWSAAGGLEAIKATTETLSTPVDGTTTTTTTYYINATELYQTNQQPAQLQQTTTHHYLELDNKRTLDGNENYLETNNGGVGVGGLIGVGGGGVGVGGGGGAATVNNQQIMIVIPHSSSGGGGVGAGGTATLAPTCAMDMNNPVASASNPHQAPLQIYGTTTAAPPTISNDLHTSLHEHHQQSAFLLHQQQQQQQQRNHGNAIINTNTATSNEPCTTNVYMATTTPLPESSPTGIQYTFSSLSPILHHQTPVTPPMTQLSTSSPPQTQTGKAPANRISLNCRFCHSRPRFTNNLEYSKHIIAMHPAEAPFNCPHCPMLFNGRTKRQQHIIEQHFSRRFSCGQCGQAFPAQRALDLHLQRYHALVDTNNVTQQRLVLQQPQQHQHQEQHHIQQHGIGGGGVDVEDVQLHMNDEGHCSNDGPVETINGSASGPSDSIMNRPEQTKKHTRILCCPDCGDLNSTEHHGHHSQQQRCPTKLSVAVHDELAPSPTAMNAITAVAATVATSISPTSNHTPPPPTSMPTIGNATTTATTTTAAAQGITTNNCNTNSPMAAGAHITLPSPEQSEPDSTSTSTLRQFRRRRISPSPSPSPSPSLLSSSSPSISQSPSSSPSSSTMSDAMQLGELRSTHNCVYCTARFTNDIALRKHHQLAHRDQNTTMPFVCSICNRGFRTRTALQRHMESHNSEGRPFECDTCHVRFPRRSQLRLHILTVHMLSKPHTCEECGKQFGTESALKTHIKFHGERLFECPVCNISFSLKRDLRKHIRQRHTGEKFYKCDLCPDTFLHYSRYSAHISGHFPPINSTDSSTTILTTTKEDIDKMTTTTTSPVESLLKVVDSITHLPELIMPPTPNPMETLEHEQHNVEVNKHIIPTPALKDNLINVDPPLTAVAVMSSDSRLLDSDHNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -