Basic Information

Insect: Amiota communis
Gene Symbol: L
Assembly: GCA_037043315.1
Location: JBAMAV010001386.1:5169638-5174793[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 6e-06 0.00071 20.7 1.7 1 23 155 177 155 177 0.98

2 17 0.5 59 5.2 5.8 1 23 183 205 183 205 0.98

3 17 2.6e-07 3.1e-05 25.0 3.1 1 23 211 233 211 233 0.99

4 17 2.2e-05 0.0026 19.0 0.2 1 23 239 261 239 261 0.98

5 17 0.093 11 7.5 0.4 2 23 328 351 327 351 0.91

6 17 0.00041 0.048 15.0 0.6 2 23 373 395 372 395 0.96

7 17 0.032 3.7 9.0 0.7 1 23 518 540 518 540 0.97

8 17 0.0017 0.21 13.0 0.8 2 23 548 569 547 569 0.94

9 17 0.00047 0.055 14.8 0.3 1 23 577 601 577 601 0.94

10 17 8.8 1e+03 1.3 0.7 2 23 637 659 636 659 0.94

11 17 0.0033 0.39 12.1 2.7 1 23 709 731 709 732 0.96

12 17 0.28 33 6.1 7.0 2 23 929 951 928 951 0.94

13 17 0.046 5.5 8.5 0.1 1 23 957 979 957 979 0.92

14 17 0.34 40 5.8 0.2 2 23 987 1008 986 1008 0.92

15 17 0.85 1e+02 4.5 0.5 2 23 1124 1145 1124 1145 0.94

16 17 0.0011 0.13 13.6 0.1 1 23 1155 1177 1155 1177 0.97

17 17 0.068 8.1 8.0 1.2 1 23 1184 1206 1184 1206 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	6e-06	0.00071	20.7	1.7	1	23	155	177	155	177	0.98
2	17	0.5	59	5.2	5.8	1	23	183	205	183	205	0.98
3	17	2.6e-07	3.1e-05	25.0	3.1	1	23	211	233	211	233	0.99
4	17	2.2e-05	0.0026	19.0	0.2	1	23	239	261	239	261	0.98
5	17	0.093	11	7.5	0.4	2	23	328	351	327	351	0.91
6	17	0.00041	0.048	15.0	0.6	2	23	373	395	372	395	0.96
7	17	0.032	3.7	9.0	0.7	1	23	518	540	518	540	0.97
8	17	0.0017	0.21	13.0	0.8	2	23	548	569	547	569	0.94
9	17	0.00047	0.055	14.8	0.3	1	23	577	601	577	601	0.94
10	17	8.8	1e+03	1.3	0.7	2	23	637	659	636	659	0.94
11	17	0.0033	0.39	12.1	2.7	1	23	709	731	709	732	0.96
12	17	0.28	33	6.1	7.0	2	23	929	951	928	951	0.94
13	17	0.046	5.5	8.5	0.1	1	23	957	979	957	979	0.92
14	17	0.34	40	5.8	0.2	2	23	987	1008	986	1008	0.92
15	17	0.85	1e+02	4.5	0.5	2	23	1124	1145	1124	1145	0.94
16	17	0.0011	0.13	13.6	0.1	1	23	1155	1177	1155	1177	0.97
17	17	0.068	8.1	8.0	1.2	1	23	1184	1206	1184	1206	0.97

Sequence Information

Coding Sequence: ATGTATTCCACGCATACTTCATCCAGCTACTCGCCTTCTATTTCGGATGGCACATTGACGCCCAACTCCTTGCCGCCACATCCGCTACACTTGACAGGTGGTTTGCACTTGCAAGGCCATAGTGCTCACGATGAACCCACTTTAGAGAATATTGCAAAGACAAATGGCAATGCTGGAACGACAACAACTAAGGTTACTGAGCTGGAAGCTGTCGCCGCCGCTGCCGCCGGCAATGAGTCTGAGACTAGAAAACGAACGACACAACGTCAtaatcagcagcaacagaatcCACATCATTCCCAACCTCACCATCGCCATGCCGAGCATTCCTTAAAAGTTGCGCACAAAATGCGTAAAATCGATAGAGTTGGTGGGACTACAGCCACGGTGTCAACAGGAGCTGCGAACAAGTTTGATAAGTTGACAGGCGAAAGCATTAAGAACTGCAGGCCCGACGGTTCCTATCAGTGTCAGTTCTGTGATAAGTCATTTCCGCGACTCGGCTACTTGAAGAAACACGAACAGAGCCATGCCGAGCACCTGCCCTTCAAATGTGACTATTGTGCGCGTCTGTTTAAGCACAAACGTTCTAGAGATCGACACACAAAGCTTCATACAGGCGATCGACGTTATAGATGTCCACATTGTGAGGCAGCATTCTCTAGAAGtgaTCATTTGAAGATTCATATGAAGACACATGATAACCAGAAGCCATTCCAGTGCACTGTCTGCAATCGTGGATATAATACAGCGGCTGCTCTTACTTCCCATATGCAGAACCACAAAAAACAGGCAGCCATACTTGCTGCCGGCGGTAATCCCCAGGCTCTTAACTACAGTCCACGATCTACGGGCTCTGCTTCGAGTAATGGCAGCCTCCACAAGCGTCGTTATGTCATGGCTATTGCCTCCGATAGTAGCCCCAGTCGCTTGGAGTATCCAAAGCGTGTGCGCAGCAATGTCAATACTGCCCTCCAGTTACGGTGCAGCTACTGCCAGAAATCAGAATTCAGCACCCTGGAACAATTAAATGGACACATTCAAAGTGTCCACGAGAAGGAGTATCAACAGACACAACAGGCGGAGGGTGGTTCTTTGGCCAGTGGATTTCAGTTATCTTGCGAGTATTGTACAATGAGATTTGCAAGCATTGCTACGCTTTTTCAGCACATGCGTAGCACTCACATTGATCGCTTAAGCAGCCCCAATTCgtattttgaacattttaatCGTTTGGCTATGACGGGCACCTTTAGTCCTCGTTTGGCTTTAGCTGCCAATCACATGCAGCAACATGTGGAGAACACCATTAAGTTGGAACAACAACAGAGTTTGCCCAGTCCGAAGATTATAAAGTCGGAAGGATTGCCACCGCCAGGGCAACAACAGCCAACTGGACAGGATGTAGAAGAACCAACTGATTTAAGTCAACACAACAAGCGGCGTTCAGTATCGCCTAGAACTAGATCAGCTTCTCCAACTCCGCCAGCACCACTTCTTCCACCATCAGCAAGTCAATGCTCTCCAGATTTATTGGAAAGACCAGGAGTATTTTTCTGTAATCAATGCAATGCAGGTCTACCGGATTTTGAGAGTTTTCGTAATCACCTGAAAACTCATATTGCGGAAGGTTTAAGCTTGGTGTGCCATCACTGTGGCATGACATTGCAGGATCAATCAGAGTACGAACGCCATGTCATCGCACACTTTCTTATTAGTAATTCAGAGTACAATTGTTCTGCCAACTGTAGCAAGTCCTATGCAAAACCGGATGAATTGCAGAAGCATCTTATGGATCAGCATGTTGTCACTATGTTCAAGTGCGCATTATGTGCTGAACTTTTTGATACGAAGGTCGCTATTCAGGTTCATTTTGCTTGTGCCCATACCACGGAAACAAAGTTGTTGCGCTGTTCAGCTTGCATGGAGGTTTTCCGCGCGGAAGCTGATTTTCACTTGCATGTCAAGACCCGTCATCAGTTGACgaacaacatgaacaacaacaataatagtcAAGGCGTCATTGGCGCTATGGGGTTAAACTCATTGCAATGCATGTTTTGTCGTGCAGTCTGTGCCTCTGATCTTGAGATGCATTTTCACTTGGCAGCGCACGCACGTCAATTCCGTTGCCCCTCGTGCCCAGAAACATTTCATGTTGAATTTCTACTAGATCGGCATATGCAGAGTCACCATGGAGGCAATGAACGTGCCAATGAACGAAGTGATAAGGAATCTTATGAAGAACAGACATCTACACTGAGTCCCATGAACTCTTTGTATGTCAATGCGCTCTTCGGTGGCAAACCGCCTTTGCTGCCACCGTTAGCTTCTAACCaaactaataacaacaacagtattATTGACTATAACGTAGCCTTTGCAGCGGCTCATCTACAGAAGGGTCTATTTCCACCccctgccgctgctgctgctgccgctgcggCAAGTAAATTCTATAGTCCCTTGCAAGTGGATACAGCCAGTGCCATGAAACCGCATCCAGCTTTAATGTACGGTCTTAGTCAACGTTACTTTGATACCAATCGTGCTCTGATGGACATGTATGCTGCTCAACAAGAGAAGACCTATTTTGTCAGTCCTAAGCCACAACAACAGACTTGTGCTGACAATCGGGGCGGTAATGGTGAGCTAAACAATGGAGCCAACAGCAGTATGCCTGGCTTCAGTTGTGGCATGTGTGAACGTAATGATTTTCGTACTGAGGCTGAGGTGCATTCGCATCGCAAAATCGTTCACAATATGAAGACCGGAGTCAGTCTACGTTGCGCTTATTGCTGTGGTAATTTTAAATCACGTAGCGAACTAGAACATCACATGAAAACATGTCACAATTCTACGGGTAAACACAAGTGCCTCATTTGTGATGAGGTCTTTCCTTCGCCCGCCATACTTGCCGAACATAAGCTACAGCATTCTAAAGTGGGTCAATCTGGAAAGTGTTCACACTGCTCCAAACCACTTGCCGATGTGGCAGCCTTTAAGGATCATTTGGGTGaccataacaacaataatgaaggTCAAATGCCCGTTCAGTGTATTTGTTGCCGTCAAACGCTTCACTCGGACTTTGAAATTAGTTTGCATGCCAAATTCCATACTAAATCTGGTAGTACCATGCAAGAAGCTGCTTGTGCTTTGTGTCTTGAACCAATTGGAAATGGAGCCGTTGGTGGCAATGTTAACAATAGCAGTGAAAGTACTGCTAAAGTATGTGAAAAATGTTGCCGTAAACATAACCTCAATGCCAGGTCACAACGCAAGCGCAGTACTGATCTCTATGCAGAGCGTTCCACGActgatcatcatcaacatcatcatcatcatgtcatCCAGTATATTGAGAATCGCtgtaatttatgtaaaatgatATTGCCTCATGCACAGAAATTGCAAGAGCATCTGGTGGAGCATACATTCGCTGGTACAGAAGAACGTGGTTTCAACTGCTACATCTGTTCGGCAGTGTTCACTGCACCCAGCGGTCTGCTTAATCACATGAACGAACATGGTGCCAATGCACGTCCCTACGACTGTAATTTATGCCcagataaattttatttccgTGCCGAACTGGATCACCATTTGCGAGAACATGAATTGCGACCAATTCCTACGCCGCCACGTCCTACAACTAAAGAAGAACGTGCCACCAGTTCACCACCATTGCTGGAAGCATCACCAACTATTGGCTCGCTCACAACTCCACCAGTTAAACAGGAAATGTATGAGTCGGAAACTCAAGACGAAACCGATTCCACTgagcaccagcaacaacagacaTCGAATGCAATTGGTGAAGATGATGAGTATATTGAAGTGGAGCAAGTACCGGAACCGAGACTAGAGGATAACTGCCGGCGTTCAGTTTGTAGCTcttaa
Protein Sequence: MYSTHTSSSYSPSISDGTLTPNSLPPHPLHLTGGLHLQGHSAHDEPTLENIAKTNGNAGTTTTKVTELEAVAAAAAGNESETRKRTTQRHNQQQQNPHHSQPHHRHAEHSLKVAHKMRKIDRVGGTTATVSTGAANKFDKLTGESIKNCRPDGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCDYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTVCNRGYNTAAALTSHMQNHKKQAAILAAGGNPQALNYSPRSTGSASSNGSLHKRRYVMAIASDSSPSRLEYPKRVRSNVNTALQLRCSYCQKSEFSTLEQLNGHIQSVHEKEYQQTQQAEGGSLASGFQLSCEYCTMRFASIATLFQHMRSTHIDRLSSPNSYFEHFNRLAMTGTFSPRLALAANHMQQHVENTIKLEQQQSLPSPKIIKSEGLPPPGQQQPTGQDVEEPTDLSQHNKRRSVSPRTRSASPTPPAPLLPPSASQCSPDLLERPGVFFCNQCNAGLPDFESFRNHLKTHIAEGLSLVCHHCGMTLQDQSEYERHVIAHFLISNSEYNCSANCSKSYAKPDELQKHLMDQHVVTMFKCALCAELFDTKVAIQVHFACAHTTETKLLRCSACMEVFRAEADFHLHVKTRHQLTNNMNNNNNSQGVIGAMGLNSLQCMFCRAVCASDLEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQSHHGGNERANERSDKESYEEQTSTLSPMNSLYVNALFGGKPPLLPPLASNQTNNNNSIIDYNVAFAAAHLQKGLFPPPAAAAAAAAASKFYSPLQVDTASAMKPHPALMYGLSQRYFDTNRALMDMYAAQQEKTYFVSPKPQQQTCADNRGGNGELNNGANSSMPGFSCGMCERNDFRTEAEVHSHRKIVHNMKTGVSLRCAYCCGNFKSRSELEHHMKTCHNSTGKHKCLICDEVFPSPAILAEHKLQHSKVGQSGKCSHCSKPLADVAAFKDHLGDHNNNNEGQMPVQCICCRQTLHSDFEISLHAKFHTKSGSTMQEAACALCLEPIGNGAVGGNVNNSSESTAKVCEKCCRKHNLNARSQRKRSTDLYAERSTTDHHQHHHHHVIQYIENRCNLCKMILPHAQKLQEHLVEHTFAGTEERGFNCYICSAVFTAPSGLLNHMNEHGANARPYDCNLCPDKFYFRAELDHHLREHELRPIPTPPRPTTKEERATSSPPLLEASPTIGSLTTPPVKQEMYESETQDETDSTEHQQQQTSNAIGEDDEYIEVEQVPEPRLEDNCRRSVCSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00062208;
90% Identity: iTF_00063034;
80% Identity: -