Basic Information

Insect: Amiota communis
Gene Symbol: -
Assembly: GCA_037043315.1
Location: JBAMAV010000566.1:1826535-1834081[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.00029 0.034 15.4 2.3 2 23 205 227 204 227 0.95

2 22 0.0017 0.2 13.0 2.5 3 23 236 256 234 256 0.96

3 22 0.033 3.9 8.9 0.4 2 21 283 302 282 303 0.94

4 22 0.023 2.7 9.5 4.3 1 23 351 374 351 374 0.98

5 22 0.19 23 6.5 0.4 2 23 412 434 411 434 0.92

6 22 0.00032 0.039 15.3 1.2 2 23 466 488 465 488 0.95

7 22 0.00022 0.026 15.8 0.9 1 23 502 524 502 524 0.96

8 22 0.00077 0.091 14.1 2.6 1 23 530 552 530 552 0.99

9 22 0.00034 0.04 15.2 5.1 1 23 558 580 558 580 0.98

10 22 0.0089 1.1 10.8 0.2 2 23 852 873 851 873 0.96

11 22 0.00013 0.015 16.6 5.1 1 23 964 987 964 987 0.97

12 22 0.017 2 9.8 1.0 1 21 994 1014 994 1015 0.93

13 22 0.064 7.6 8.1 2.6 1 23 1024 1046 1024 1046 0.93

14 22 0.00024 0.028 15.7 2.2 2 23 1054 1076 1053 1076 0.96

15 22 0.00092 0.11 13.8 2.3 2 23 1084 1105 1083 1105 0.96

16 22 0.039 4.6 8.7 0.3 2 21 1132 1151 1131 1152 0.94

17 22 0.0088 1.1 10.8 4.6 1 23 1200 1223 1200 1223 0.98

18 22 0.043 5.1 8.6 0.4 2 23 1261 1283 1260 1283 0.94

19 22 0.00019 0.023 16.0 1.2 2 23 1315 1337 1314 1337 0.95

20 22 0.0066 0.78 11.2 0.1 1 23 1346 1368 1346 1368 0.95

21 22 0.019 2.3 9.7 1.6 1 23 1374 1396 1374 1396 0.99

22 22 6.6e-07 7.9e-05 23.7 1.7 1 23 1402 1424 1402 1424 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.00029	0.034	15.4	2.3	2	23	205	227	204	227	0.95
2	22	0.0017	0.2	13.0	2.5	3	23	236	256	234	256	0.96
3	22	0.033	3.9	8.9	0.4	2	21	283	302	282	303	0.94
4	22	0.023	2.7	9.5	4.3	1	23	351	374	351	374	0.98
5	22	0.19	23	6.5	0.4	2	23	412	434	411	434	0.92
6	22	0.00032	0.039	15.3	1.2	2	23	466	488	465	488	0.95
7	22	0.00022	0.026	15.8	0.9	1	23	502	524	502	524	0.96
8	22	0.00077	0.091	14.1	2.6	1	23	530	552	530	552	0.99
9	22	0.00034	0.04	15.2	5.1	1	23	558	580	558	580	0.98
10	22	0.0089	1.1	10.8	0.2	2	23	852	873	851	873	0.96
11	22	0.00013	0.015	16.6	5.1	1	23	964	987	964	987	0.97
12	22	0.017	2	9.8	1.0	1	21	994	1014	994	1015	0.93
13	22	0.064	7.6	8.1	2.6	1	23	1024	1046	1024	1046	0.93
14	22	0.00024	0.028	15.7	2.2	2	23	1054	1076	1053	1076	0.96
15	22	0.00092	0.11	13.8	2.3	2	23	1084	1105	1083	1105	0.96
16	22	0.039	4.6	8.7	0.3	2	21	1132	1151	1131	1152	0.94
17	22	0.0088	1.1	10.8	4.6	1	23	1200	1223	1200	1223	0.98
18	22	0.043	5.1	8.6	0.4	2	23	1261	1283	1260	1283	0.94
19	22	0.00019	0.023	16.0	1.2	2	23	1315	1337	1314	1337	0.95
20	22	0.0066	0.78	11.2	0.1	1	23	1346	1368	1346	1368	0.95
21	22	0.019	2.3	9.7	1.6	1	23	1374	1396	1374	1396	0.99
22	22	6.6e-07	7.9e-05	23.7	1.7	1	23	1402	1424	1402	1424	0.98

Sequence Information

Coding Sequence: ATGGTGCTTAACAGAATTTGCAGAACTTGCGATGTAACTAATTCCGCAGAGATCTTTAAACTGAATTCATGTCCAAAAAAATATGGCGGAAAAATGCTCCTGGACATGTTAAAAGAAGTAACTCAAATAGATATCGGAAAAGAAAACACAGACAAGTTGCCACAGTTCGTATGTTGCACTTGTATCCGTAAACTACAAATTGCCtatgattttgttattcaaGCACGTCAAGCAACCAAAGATATGTTGGATTTTCTTAATGGCATTAATACAGAATGCTTGCAAGAAATTCCAATGGAAGTTTGTACTGAACAATTATTGGAAATAAAGCTGGAAGAAGACACTTACGAAGAGTCAATTCCAATAAATACAACTTATTGGAGTGATCAGAGCAAATtagatataaaaatgaatatatcaGATGATGAGGGAAATATCAATCCAAAAAGAGATCCCTTAGTTATgaataaatcaatgaaaaacaCTGCGAAACGGACAAACGAAATCATCAATGATGATACTGTAAGCTCCGaTGAACTTGATGAATTACCATTACTACAGCGAAgactcaaacaaaaacaatcgaATAATTTAAAAACGAAAGAAACATTACATTGTTCCAAGTGTAATCGAACATACGAtgacaaaaaatcattaactATACACATGATTAAAATTCATGCGGACGGTTCTAAAATGCTTTTTTGCCAATGGTGTAGTCGAACATTTTACCGGAGGGATTATATGTTAAAACATCTAAAACGCCATGGCATTAGCGAAAAAGATCTGCCTCTTGCTGAAATGCTTGTTATAGCAACTTCAAAACCCAATGGTGACAAAGTCATTCAATGCAAAGTTTGTAATCTACAATTTGATCGAATTTGTGATTTAAGAGAACACATTCAATTGGagttaaaattaaacttattgAAACATCAAAGCTATGAATCACTAACGAATTACACAATTACAAATGAATCTGGATTTGAATTGCACCTTGAAGACTCTGAAACAGATGAAGAAGATTCAGTTGAAAGCAAGCAGATGTGCTACAAATGTGAGATTTGCCAGGTCCAGTGTAAGCGCAAGTTTGAAATGtttcaacatcaacaatcaATGCACCGATTTGAGCATTTGCCATACTCTTGCGAGAAgtgtatttttaaatgtgtATCAAagaaTATACTTGATCATCATCGGAGTACACAATGTTTTAATGAGCAGAAGGAGTTATCATGTGaaaaatgttcttataaatttttgtggcCAGAAAATTTAACGCGGCACATGTTGCTCCAGCATCCAGACGAAGTAGATAGCAAAATTTCTTCACAAGAGTCTGGCATAAGTAGTTCCAAGGAGGTTGTTGAAGAAACAGATGCGACTGTTCAGTTGCAATGTCCACATTGTGATAAAtcataccaattgaaaggtcgCCTTAAAAATCATATTCGAGATGTGCACATAGATGgcgataaaaagaaaaaagatgcTGAAAGAAAGTATCTCTGCTCCTTATGTGGCATAGAATCCAAGTCGCAAGCACATTTAGTAACACATATGCGAAGACATACTGGAGAAAAACCATTTAAATGTGATATGTGCGAAATGGCTTTTCCACGACATTACGATATGTTGCAACATCGTAGAAAACACACAGGCGAAAAGCCTTATCATTGCACTGTTTGTAGCAAAGATTTTGCCCAATCTTGCAAACTCAAGCGCCACATGTTGATTCACAGTGGCTTAAAGCCACACAAATGCACAGTATGTGATTATAAAACTATACACGATATAATGGCGCCTAACAGAATTTGCAGAACTTGCGATGTAACTAATCCCACAGAGTTCTTTAAACTGAATTCAAGTCCTAAAAAATATGGTGGAAAGATGCTCCTGGATTTGTTAAAGGAAGTAACTCAAATAGATATTAAAAAAGaccacaaagaaaaattaccACAGTTCATTTGTTGCACTTGCGTTCGTAAGCTACAAAATGcctatgattttattattcaagCACATGAGGCAAATAAACAATTGTTGGACCTTCTTAATGACATTAATACAGAATGCCTGCAAGAAGTTCCAATGGAGTTTTGTATTGAACAATTGGAGATAAAGTTAGAAGAAGGCAGTTACGAAGAGTCTATTCCAAAAACTGCATCTTATTTAAGTGATCAGagcaaattaaatattaaaataaatatatcagATGATGAGGGAAATATAAATCCAAAAAGAGATCCCTTAGTTatgaataaaacaatgaaaaacacTGCGAAACGACCAAAGGAAATCATCGGTGATGATACAGTAAGCTCCGATGAACTTGATGAATTACCATTACAACAGCGAAgactcaaacaaaaacaatcgaATATTTCAAAAACGACGGATGCTAGGAAATTGCGCAAGGATGCATTAGGCACCCATTTTAAAACACATCAAGAAgaaaagatgaaaacaaaagtaacagCTACTCTTCCGGAATCAAAGCAAGCCAAAGAAGTCGATATAAATCTATGCAGGCCGCATGGTTGCAAACTAATTCAATGCatgatttgtttaataaagTTCGCGAAAATCTCTGACCTAcgaaaacatttaaatgagCACCCGGTTATTTCTTCGTTTGCAGAACGCTCTAACGAATCGTTGCACGATATAGCCAAacgtttttatatttacttcaAAGATGCAACTGAAGAAAagttgacaacaaaaattcgCGAAGACTTAAGcgataaaaaatttgaaaatttttactCAATAACCAATCAATCCGGATATGAATTAAGTTTGTCGAGTTCAGAGACTGAAAGTGAAGTTGCATCACAATCGGAATCAGAATCAGATGAGCCCAAATGTAAAGATTCAAGAAAGAGCTACACCTGTGAGTTGtgcaataagaaatataatcGGAAATATCAACTTTTTGATCACCAGAGGCATGAACATGAGTGGAGTGAAGCAGTTCATGTGTGCAGACGTTGCGATGCAAGATTTGTAAATCAACAACTACTGGAGCATCATTATGAAACACAATGCAAAAACTCAAATAAGCGTTTCATATGTAAGAAGTGCCCTCTTAGATTTCGATGgaaacacaatttattaacACATTACGATGACCATAGGAAGAACAAAGAAACATTACAATGTTCGAAGTGCAATCGAACCTACGAtgacaaaaaatcatttactaTACACATGCTTAAAACTCATGCCGACGGTTCTAAAATGCTGTCTTGCCAGTGGTGTAGCCGGACATTTTACCGGAGGGATTATATGTTAAAACATCTAAAGCGCCATGGCATTAGAGAAAAAGATCTGCCTCTCGCTGAAACACTTGTTATGGCAACTTCAAAACCCAATGGTGACAAAGTCATTCAATGCAAAGTTTGTAATCTACAATTTGAACGAATTTGTGATTTAAAAGAACACATTCTATTGGagttaaaattaaacttatcGAAACATCAAAGCTATGAATCACTAACCAATTACACAATTACAAATGAATCTGGATTTGAATTGCACCTCGATGACTCGGAAACAGATGAAGAAGATTCAGTTGAAAGTAAGCAGATGTGCTACAAATGTGAGATTTGCCAGGTCCAGTGTAAGCGCAAGTTTGAAATGTTTCAACATCAACGATCAATGCACCGATTTGAGCAATTGCCATACTCTTGCGAGAAgtgtatttttaaatgtgtATCTAagaatatACTTGATCATCATCGGAGCACACAATGTTTTAATGAGCAGAAGCAGTTATCATGTGaaaaatgttcttataaatatatgtgGCCTGAAAATTTAACGCGGCACATGTTGCTCCAGCATCCAGACAAAGTAGATAGCAAAATTTCTGCACAAGAAtctaacataaataaatgtaaggAGGTTGTTGCAGAAACAGATGCGACTGTTCAGTTGCAGTGTCCACATTGTGATAAAACATACCAATTTCAAGGACGCCTGAATAATCATATACGCGATGTGCATAAGAAAAAGGATActgaaagaaaatttctttgttcGTTGTGTGGGATGGAGTTACAATCAAATGCTTACTTGGTTATACATATGCGAAGACATACTGGGGATAAACCATTCAAATGTGATATGTGTGAAATGGCGTTTCCACTACACTACGAAATGTTGCTGCATCGGAGAAAACATACAGGCGAAAAACCATACCATTGCACTGTTTGTGGGAAGGATTTTGCCCGCTCCGACAAACTCAAACGGCACATGTTAATACACAGTGATTTAAAACCACACAAGTGCACACGGCTTATTCGAATAACTATGGATCGTTTTCGCACCACGTTTACTCTTAATGATAATGTGCATTCAGTAAGACGCCCAACAGTGCGCACCGAACAAGCTACAGCCGCTGTACGGAAagcattgaattga
Protein Sequence: MVLNRICRTCDVTNSAEIFKLNSCPKKYGGKMLLDMLKEVTQIDIGKENTDKLPQFVCCTCIRKLQIAYDFVIQARQATKDMLDFLNGINTECLQEIPMEVCTEQLLEIKLEEDTYEESIPINTTYWSDQSKLDIKMNISDDEGNINPKRDPLVMNKSMKNTAKRTNEIINDDTVSSDELDELPLLQRRLKQKQSNNLKTKETLHCSKCNRTYDDKKSLTIHMIKIHADGSKMLFCQWCSRTFYRRDYMLKHLKRHGISEKDLPLAEMLVIATSKPNGDKVIQCKVCNLQFDRICDLREHIQLELKLNLLKHQSYESLTNYTITNESGFELHLEDSETDEEDSVESKQMCYKCEICQVQCKRKFEMFQHQQSMHRFEHLPYSCEKCIFKCVSKNILDHHRSTQCFNEQKELSCEKCSYKFLWPENLTRHMLLQHPDEVDSKISSQESGISSSKEVVEETDATVQLQCPHCDKSYQLKGRLKNHIRDVHIDGDKKKKDAERKYLCSLCGIESKSQAHLVTHMRRHTGEKPFKCDMCEMAFPRHYDMLQHRRKHTGEKPYHCTVCSKDFAQSCKLKRHMLIHSGLKPHKCTVCDYKTIHDIMAPNRICRTCDVTNPTEFFKLNSSPKKYGGKMLLDLLKEVTQIDIKKDHKEKLPQFICCTCVRKLQNAYDFIIQAHEANKQLLDLLNDINTECLQEVPMEFCIEQLEIKLEEGSYEESIPKTASYLSDQSKLNIKINISDDEGNINPKRDPLVMNKTMKNTAKRPKEIIGDDTVSSDELDELPLQQRRLKQKQSNISKTTDARKLRKDALGTHFKTHQEEKMKTKVTATLPESKQAKEVDINLCRPHGCKLIQCMICLIKFAKISDLRKHLNEHPVISSFAERSNESLHDIAKRFYIYFKDATEEKLTTKIREDLSDKKFENFYSITNQSGYELSLSSSETESEVASQSESESDEPKCKDSRKSYTCELCNKKYNRKYQLFDHQRHEHEWSEAVHVCRRCDARFVNQQLLEHHYETQCKNSNKRFICKKCPLRFRWKHNLLTHYDDHRKNKETLQCSKCNRTYDDKKSFTIHMLKTHADGSKMLSCQWCSRTFYRRDYMLKHLKRHGIREKDLPLAETLVMATSKPNGDKVIQCKVCNLQFERICDLKEHILLELKLNLSKHQSYESLTNYTITNESGFELHLDDSETDEEDSVESKQMCYKCEICQVQCKRKFEMFQHQRSMHRFEQLPYSCEKCIFKCVSKNILDHHRSTQCFNEQKQLSCEKCSYKYMWPENLTRHMLLQHPDKVDSKISAQESNINKCKEVVAETDATVQLQCPHCDKTYQFQGRLNNHIRDVHKKKDTERKFLCSLCGMELQSNAYLVIHMRRHTGDKPFKCDMCEMAFPLHYEMLLHRRKHTGEKPYHCTVCGKDFARSDKLKRHMLIHSDLKPHKCTRLIRITMDRFRTTFTLNDNVHSVRRPTVRTEQATAAVRKALN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -