Aequ017253.1
Basic Information
- Insect
- Ametastegia equiseti
- Gene Symbol
- -
- Assembly
- GCA_963989295.1
- Location
- OZ022396.1:8607094-8614578[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.0012 0.14 13.3 0.8 2 23 1132 1153 1131 1153 0.97 2 15 0.31 37 5.8 0.1 2 17 1160 1175 1160 1180 0.86 3 15 0.001 0.12 13.6 3.3 1 23 1189 1212 1189 1212 0.97 4 15 0.00026 0.03 15.5 1.2 2 23 1232 1253 1231 1253 0.98 5 15 0.48 56 5.2 4.8 2 21 1346 1365 1345 1366 0.93 6 15 0.0015 0.18 13.0 0.9 1 21 1481 1501 1481 1502 0.95 7 15 0.0061 0.71 11.1 0.1 2 23 1524 1545 1523 1545 0.91 8 15 0.02 2.4 9.5 0.6 2 23 1568 1589 1567 1589 0.96 9 15 0.34 39 5.7 0.3 1 23 1637 1659 1637 1659 0.97 10 15 0.046 5.4 8.4 1.0 1 23 1686 1708 1686 1708 0.97 11 15 0.066 7.8 7.9 1.7 1 21 1789 1809 1789 1810 0.94 12 15 0.1 12 7.3 3.0 1 23 2341 2365 2341 2365 0.94 13 15 0.0012 0.14 13.4 4.9 2 23 2387 2409 2386 2409 0.96 14 15 0.002 0.23 12.7 0.1 1 23 2427 2450 2427 2450 0.97 15 15 0.004 0.47 11.7 0.2 1 23 2467 2489 2467 2489 0.99
Sequence Information
- Coding Sequence
- ATGGAATTTTGGAGACGCAGGTCAGAGAGTCGTATAGGTAAAATCTACAAGAAACTAAACTTGAAAAGCAATCGTCGCGACAGTACGAACTCATCGAGTTCCGACACAATCACTACTACGTTTGTGAACAGTGGAATTATCGACGATGACGACACGGAGGATGGAAATGACTGTTGTGCCGTTACCAACAGAGAAACGGAAATATCCGATAAAACTTCAAATTCAATCTCCAGTTCTGAACCAAACAGCGATTCAACTTTGAAGAGACAATTTGACGATGGACGAAGCAGAATGTACGATATAACATCGTGTAAACCATGTTCTGTGATACTAGAACGTATGTCCGAAGAGGATGTGAAGAAATTATCGTCAAGAAGTAATTTCGGGGTGAAGAATGTCAAGAAGAAACATGATGGTAAGAAACCTCCCAGAGTTCAGGAACTTCGTCAATACGTGAGAGGACCTAACGGAAAATATATGTGGAGATCTTCTGTAGAGGAAACTGATGTTAACAAACCAGGGAATTCCGTTGCTGATAAGAAACCGAATGATGGGAAAAACAAAACTTCTTCGGTGAGACTCACAAGATCTAATGACAAATCTCAAGCAAGCTTATCCGACGAGAGAACCACTACATCTTGTCATCTGTTGAGTCAGGAGAAACTTACCACTGACAACTtggataagaaaaatgaagattctaatgaaaatgaaagcaGTGAGATCGCTGCAAAGGATTCTGAGATCAAAGTACTGCAACCAACACGATTTAGACTCTCTCTTAGGAAGAAGATTTCCAATACCAAAGAGGACGAGGCATTTAGACAAGATCCTTCTGCCCAAAAAAGCGGCCAAGATCCTTCTAGTAATACATCCAAAGCTGGGGATAACGATGGCATTGACACAAATAGGTTTAGTCTACATGACTCTGAAGCAAGAGCATCCCcacggaaaaatttcaagctctCGCTCAAGCAGATGAGGAATAATACGAAAGATGATGAAGCACATGGACAAGATCCTCCCGACGAAGTCTCTCAGCTTGAGGATTCCAAAGAAATAATTGAGAGCAATGTGTTCGAGTTGAATCACCTGAAGCGGTTGATCAAGAGAAGATTGGACGAAACAGAAGGAGGGGATGAAGCATCTGTTagtaagttgaaaaaatacaaagaaaagCAGGATGCGCCTGGTCACCATCGCAGCGAAGTGGACCAACTTGATTCACGTCCACATAAATCTAGCTCACTCAGACCCTCTCATCAAAAAACCAGATCTCAAGGCCTGAGGGTACTTGATGACAGGGCAAGTACACAGAAAATTTGTTCCGAAGTACAAAAGGAAGCACCTATAGttagaaatgttagagtttCACTTGTAAAACTAGATAAGAATGTTGAATTTAAGATTGATGAGGTTCCAGATCGTTGCATAGATAGACGTGAATCAGTTAACGattctgaaattgaaattctaaagaCTCAATCTAACGAGTTGAGTCAAAGTTGTTCTAACAAAACTAAAGATACTAAGATTACGGATTACTTTtttaaaatcgataaaaccAGAGTCGTATCGCACAGTAATAGCATAGATCAGAAAGCCAGGGATTcgttattgaaaaagaaacacgGTATTCTTAGGGACCCTATGGTATTGTTGATCGATCtccagaagttgaaaataccTAAATCTAAATATTCAGcttcaaaaattgagaaattgtcACGGGAATATGCCAAATCATCCTTTATTAACTATTCCACTAGTACAACAGTCGATCTGCCATCGTCATTTTTAATTCCCAGTACTAATTTCCCACTCAATTCTAAGGAATCATCGACAAATTGTGAACCATCATCATCAATAACACATACAATTCCAATGACAAAGAATCTGCCATCTAAAGCTCTCAACTTACTGcaagtgaaaaaatgtttgccAGTCGCTACACATGATTCGATAAATAATGATCAAACGTTGTTGGTCCATGATCATTTAGTTAACCCAAAATATGAGTTACAGATTGACCTAGTTCCAATCTCAGATAATCTATTATCCGCGCGCTGTAGATCACCGCCAATGAAAAAACATTCGCCAGCTAAAAGCACACAAGATCCGTTACAGGATCATTCATATGTGGATACTTGTACTACGCCTAGATCAAGAAGGGGGAATAATACTAAACGTGTTAACAAAGATTTAGGTATTAATCAAGAAGTTCCTAACAAAGATTCGTCTCATCAGAATTCTTGCGAGCTAAGAACTGCCCTGCATTCCTCACCCACGATTACCAGAAAACGTGGGAACTATTCTCCAATCTCTCAGATTAGAAATACTACACCAAAATCAGCCCAAAATGTGAACTCAGAGCTCAGAAATTTGGCTCTTTCACCAGTGAAACGGACCGTTTTGATCGACAATGAAATCCCATTGAATAAATCTCAAGATCAGGTGATCCACGTTATTAGCAAATCACCTAAAACTATTGAAACACAGAAAAGAGATGGTGCTAGGTCACGGATGGATAGTTTGGATGTTACGCCCGTTCGAAACGACAAAcggaaaaaatcgaacaagaCTTCAACGATTCTTAACGGAGATTCAAATGATACTGCAAAACGTCCACCGGATACAAGCCCGGCGATTTCATCTGTTACAAAATCTCCCACACACATGGGAATCTCAACAATTCATTCAAGACATGAGTCACCATGGCGTCTACCGGTGGACAGTATGACTATTGTGAGCCGTGAGATGATGGAAGAAAATAACTACTGGTTGGGCTTGGATAACACCATTATTAACGATTTGACTAAGGACTGTACAACTGTGGCTCAAGATCATGCCACGGAAGGAAACGCATCTTTGGACATCTTGCCATCTAACAATACGACTAAAGATAAAACAAGAACAACCAGCAGTACCACATCAAATGTTGACAAGACTTCATCTCCGAAATCACTAATGACACAGAgtgtgattaatttttctccaaaacgACTCGCTGGCACAACCGTTGGAGTTTGTTCAAGTGAATTAAATGCTCCTACTAGTAGTGGCgtggagcaaaaaaaaaatgacaatataCAGAAAAGCGATTCAGTTTCGCAAACACAAACAATGATATCATCTGTTCAAAATCCAATGCATTCAATTGCGGTTGAGAGTATTGATCAGGGGAGCCGAAACTCCAAAGTTCAGGACGAGCTGTTATTGGATTCTCAGGAAGAAAATCAGTTGGTAATTGACACAGATGGAAGCGATTCTGAGTCGCCAGCGGTAGAAGATACACTGCCAGGTACATCAACTTTGGGCTGTTTGAACAGTGGCGCAGATACATCAGTACAAAATGAAAAGGCGGGTACAAAGAAAGTGGTATCCACCAGGCAAGAATGCGCCATCTGCCAAAAGATATGTAGAAGCTACGCAGGCCTAGAGCAGCACATGAGACAGCACGTTAAACATACGGTTGCATCTTGCCCTATCTGTGACAAACCGCTTTCTAAAAGAGATGCTCTTCAACATTATCTTCAGCATTCACAGGGCGGCGAATTTGGTTTTCACTCATGTGGTATgtgtgaattgaaattcaggaaaaaatcTAGTCTCACTGGTCATTTGAGGACTAAacataacattggaaaaaatcgcCTCAGATCAAAAATAAATCCGACGAGTGAAAATTATAACAAGTGCACCATTTGCCAAACAACGTATAATTCCAAGGAAGACTTGTTCTTACATATGATAAAACACACGCCGCAGGAATTGCGAGATACTTATGCGGTTGAAAAAGCTAAGCTGGAACGTCTTACAAGTGGAAATACCCTTTGTCAGAATCAAGGCGGCCAAActcttgaaaaagaaaagactcaagaaagtgaagaaaaatcatctcAAACCATAGAGACTAATAATCCTCTACCAACGTCGCCTCCTCCACCTCTTGTTAACTTTGACGTATCCATTTGTATGTGCCATAAAGATGAAAGACTAGAAATAGCCGGTGGtgtgataattgaaattgCACTCACTTGTATGGAGTGCAAAACGTTttttaaaacgaaaaaatgctTTAAAGATCATTACAATAGCACCTCGTGCAAATGGAGTGATAATGCTGTAATCTCGCCTACAATGTTCTGCAACAAATGCTGCacgattttgaataacttgcAAGACATGCACGGACATCTGACAAAGCACGGAAGTGTTGACGTTGATACAAAAACATCCGTGTATTGCAAATTTtgcaatatatttttctttggaattggATCTTTGTTTTATGCGCATTGGTCAGAACACAGGAAGAACCCATTATTTCAAGCCGATCATTTCTCGTTTCCAAAGAATACAAAGGTCAAGATTGTTGAGCTCGGAGGTTCGCAGCCTGCTGAACAAGATGAACCCACGGAAAGTCTCTTCATAGCAGACCATCAATGCCAGAATTGTGAAAGACCGTTTCAAAGTGAAGATGAGCTCAAAAAACATCTCAAGTCATGCTCTAAGAAAGGGGATTCTGAATCTCAGGCgattgaaaaccaaaaatctgttttgaaattaatttgcaGCATTTGTAACAAAGAATTTGTGAACAAGTCAACGTTTGATGGTCACATCGGGGAGCACGATACTATCAAAGATCTTCTTCAAGCACCGAAATCCTTGGACAAGTcattcgaaaataatcaacTGACATGCAGTATTTGTCAAACTGAGTACGACACGATGGAAAGTTACAAAAAACACTTAGCCAGACATGAAgttattcaagaaaaatttctctgCGATTATTGTACTCTCATGATGGACAGTGTAGAAGATTTTGAACTCCATTGTGCGGAGCATAAAGGTACGCCGGAAAAACCAGTTTCATGCAAAGTTATATTTGCTATAAATAAGTTTCATTGCAAGGTTTGCAAAATAGGGCTAGACAATCAATCTGTGTTAGACGAACACCTGGCAACGCATACCAATTCAATTACACCGATCCCAAAGTTGTCAGAGAATTTGACGACTGGAATTGTCCCAGATACCGAGACGAAACTTCACAGTTGCACAACCTGCCAGCTAGAGTTCGATAACCAAATCAAGTTAGATGCTCATACTGCTACACACAATAAAGATCCGTTGAGCGACACGATAGAAGACCCTGTCCTTATTCACCTATCTGATGATTCAAATTCCACCGACATTGAAATAGTAGCTATCGAGGATAATGGGGAAAGGGAAATACCTGTTGTAGAAAATACTGTACCAGATGTACAACAAGCTGAAGAACAACAGGAAACAGCTAATGCACCGGAACCCAAAAAACCAGCATTCCTGCGTGTAAAGAATTTGAAGGAATTATTGCCCTATGCTTGTAGCAAGTGCAAGTCGGAGTTCGACACGCAAATTAATCTCAGCAAACATGTTTGTAAGCAAAACGCTACCCCTGTTCGAAGTAAAGGGTACAATTACTTTTGTAGAATCTGCAAGAGCTTCCCATGTGATAATGATTCCGATTGGAATCGTCACGTATTGACACATTTTCCACTCAATGCTTCTCAAAAGTTTAGTGGCCACTGGTTCCATGTGTTGACAACGCAATGCGGGCAACAAATTTTAAAATGCGCACTTTGTCCTAACTTCGATTCTCTGACGATCCACACGATGCGCAAGCATTTTATATCTAATCACCGAGATATTTATCATCCAATTTTCACCTGTAGAGTTTGTCATACTTTCAAAACTGATATGGAACAGGAAATTCGACGACACGAAGCTGGTCACTTTCAACAATCATCTCCGCGACAACCGTTAGCTTACTCTGCCAACAATTTATTGTCTTCTTTGTCGGTTGAAAATGCCAACAACTACCAACAGTCACTTTTGATGCCACCTTCAATTGCCTCTGGCAATAAGGCATTCATCCCTCAACCggtggaaaatttgaatcactCTGATCAACCAGATTCGATACAGCCCCTCGTCAACTTGAGTAACAATATGCCGACAGCTCAGCCAGTTGAGAATTCCAACAACCTTCAACTACCAGTCCTAAATCAGTCTTCAATTGGATCAGGCAATAATTCCTCCTCACTTCAATCGCTACAGAATTTTACCAACTCTCAACAACTAGGACCAACGCTCCAACCAAGCAATAATTCTAACAATTTCCAACAACATGGTCCAATCCCTCCTGTAACAAGTTCAGGCAACAATTCATCCTCACTTCCACTGCTACAAAGTTCCAACAACTTTGAACAACCAGGACAAATACTCCAACCAGATAATAATTCTGACTTGCAACAGCCAAGTTCAATTTCATCTGCGACTGATACTACTACTCATAAGATGCAGTCACTTCAACCGGCTGACAATTTCAACAACATTAGACGAACACTATGGATTCCACCTATGGTTACCGCAGTCAATAAGTTATCCTCGCTTCAATCAACGCAAAGTTTCAACACGACCCAGGAACCGGTTCAAACACTACAGCCAGATAATAGTTTGAACAATTTCCAACTATCAATTCCGGTTTCATCCGTGACTACCTCGGCCAGTAATCTCTCGCAAATTCAACCAGTTGACAATGCAAACAAGCTTCCACAACCAGTTACGATTCCTCATGTAACCAGTTCAGGTAATAATTTGGTGTTGAAATATATCCTCAACACTGGACCACCGAGCTCCATCCTTCAATCAGTTGATAAGCCAAACAACACTCAACAATCGATTTTAACTCCACCTGTGACTAGCGTGGCAAGCAGCAGTCTAGCTCCACTCCAATCTGTGGATAATGGACAATGGTTATCGACAACGCCACAAACTTTTCAGGTACAAATCAACGGTGCTCCTCCATTGAACAATATGACTAATGTGGTGCACACATTACCCTTGTATGTAGCAAGTACGATATACTGTTGTCGTATTTGTAAGGATTACAAGTGTTCTAGCGAACAGGAATTAAAGGCACACGAATCTCTGCACGAGTTCATCCAGTTGGGCGAAACTTCTAAGAGATTATTCAGTTGCAAATTGTGCacaaatatgtttttttcaacccaGGATCAGTTGAGAacacatatagatatatgtcaTAAAGCTGAGAAATCAAATGTACAACAGAATCAGACACAGTCTAATGTCATCGATACTACATCTAAATGCACACATTGTTCCCAGACCTTTTCATCATCTGCTCAATTAATGCAACATGTACATACTACTCACAATTTAGTTAATCAACAACAAAACGACaatcagtttcaaaattcatgtcCCTACTCTTGCCAAATATGCTCGATGGGTTTCCCAAACGAGCCCTTCTTGCAGGCACACATAAGGCAGATACATCCCAACGTTAAATTACCCCGTCAGAAACTAAGCGATCCTAAAACTTTATATCAATGTGATACTTGCGGTCTGCTTCTTATATCTGAAGCAACGTTGACCTATCACATGAGATCTCACAACATAGGATTTCAGTAA
- Protein Sequence
- MEFWRRRSESRIGKIYKKLNLKSNRRDSTNSSSSDTITTTFVNSGIIDDDDTEDGNDCCAVTNRETEISDKTSNSISSSEPNSDSTLKRQFDDGRSRMYDITSCKPCSVILERMSEEDVKKLSSRSNFGVKNVKKKHDGKKPPRVQELRQYVRGPNGKYMWRSSVEETDVNKPGNSVADKKPNDGKNKTSSVRLTRSNDKSQASLSDERTTTSCHLLSQEKLTTDNLDKKNEDSNENESSEIAAKDSEIKVLQPTRFRLSLRKKISNTKEDEAFRQDPSAQKSGQDPSSNTSKAGDNDGIDTNRFSLHDSEARASPRKNFKLSLKQMRNNTKDDEAHGQDPPDEVSQLEDSKEIIESNVFELNHLKRLIKRRLDETEGGDEASVSKLKKYKEKQDAPGHHRSEVDQLDSRPHKSSSLRPSHQKTRSQGLRVLDDRASTQKICSEVQKEAPIVRNVRVSLVKLDKNVEFKIDEVPDRCIDRRESVNDSEIEILKTQSNELSQSCSNKTKDTKITDYFFKIDKTRVVSHSNSIDQKARDSLLKKKHGILRDPMVLLIDLQKLKIPKSKYSASKIEKLSREYAKSSFINYSTSTTVDLPSSFLIPSTNFPLNSKESSTNCEPSSSITHTIPMTKNLPSKALNLLQVKKCLPVATHDSINNDQTLLVHDHLVNPKYELQIDLVPISDNLLSARCRSPPMKKHSPAKSTQDPLQDHSYVDTCTTPRSRRGNNTKRVNKDLGINQEVPNKDSSHQNSCELRTALHSSPTITRKRGNYSPISQIRNTTPKSAQNVNSELRNLALSPVKRTVLIDNEIPLNKSQDQVIHVISKSPKTIETQKRDGARSRMDSLDVTPVRNDKRKKSNKTSTILNGDSNDTAKRPPDTSPAISSVTKSPTHMGISTIHSRHESPWRLPVDSMTIVSREMMEENNYWLGLDNTIINDLTKDCTTVAQDHATEGNASLDILPSNNTTKDKTRTTSSTTSNVDKTSSPKSLMTQSVINFSPKRLAGTTVGVCSSELNAPTSSGVEQKKNDNIQKSDSVSQTQTMISSVQNPMHSIAVESIDQGSRNSKVQDELLLDSQEENQLVIDTDGSDSESPAVEDTLPGTSTLGCLNSGADTSVQNEKAGTKKVVSTRQECAICQKICRSYAGLEQHMRQHVKHTVASCPICDKPLSKRDALQHYLQHSQGGEFGFHSCGMCELKFRKKSSLTGHLRTKHNIGKNRLRSKINPTSENYNKCTICQTTYNSKEDLFLHMIKHTPQELRDTYAVEKAKLERLTSGNTLCQNQGGQTLEKEKTQESEEKSSQTIETNNPLPTSPPPPLVNFDVSICMCHKDERLEIAGGVIIEIALTCMECKTFFKTKKCFKDHYNSTSCKWSDNAVISPTMFCNKCCTILNNLQDMHGHLTKHGSVDVDTKTSVYCKFCNIFFFGIGSLFYAHWSEHRKNPLFQADHFSFPKNTKVKIVELGGSQPAEQDEPTESLFIADHQCQNCERPFQSEDELKKHLKSCSKKGDSESQAIENQKSVLKLICSICNKEFVNKSTFDGHIGEHDTIKDLLQAPKSLDKSFENNQLTCSICQTEYDTMESYKKHLARHEVIQEKFLCDYCTLMMDSVEDFELHCAEHKGTPEKPVSCKVIFAINKFHCKVCKIGLDNQSVLDEHLATHTNSITPIPKLSENLTTGIVPDTETKLHSCTTCQLEFDNQIKLDAHTATHNKDPLSDTIEDPVLIHLSDDSNSTDIEIVAIEDNGEREIPVVENTVPDVQQAEEQQETANAPEPKKPAFLRVKNLKELLPYACSKCKSEFDTQINLSKHVCKQNATPVRSKGYNYFCRICKSFPCDNDSDWNRHVLTHFPLNASQKFSGHWFHVLTTQCGQQILKCALCPNFDSLTIHTMRKHFISNHRDIYHPIFTCRVCHTFKTDMEQEIRRHEAGHFQQSSPRQPLAYSANNLLSSLSVENANNYQQSLLMPPSIASGNKAFIPQPVENLNHSDQPDSIQPLVNLSNNMPTAQPVENSNNLQLPVLNQSSIGSGNNSSSLQSLQNFTNSQQLGPTLQPSNNSNNFQQHGPIPPVTSSGNNSSSLPLLQSSNNFEQPGQILQPDNNSDLQQPSSISSATDTTTHKMQSLQPADNFNNIRRTLWIPPMVTAVNKLSSLQSTQSFNTTQEPVQTLQPDNSLNNFQLSIPVSSVTTSASNLSQIQPVDNANKLPQPVTIPHVTSSGNNLVLKYILNTGPPSSILQSVDKPNNTQQSILTPPVTSVASSSLAPLQSVDNGQWLSTTPQTFQVQINGAPPLNNMTNVVHTLPLYVASTIYCCRICKDYKCSSEQELKAHESLHEFIQLGETSKRLFSCKLCTNMFFSTQDQLRTHIDICHKAEKSNVQQNQTQSNVIDTTSKCTHCSQTFSSSAQLMQHVHTTHNLVNQQQNDNQFQNSCPYSCQICSMGFPNEPFLQAHIRQIHPNVKLPRQKLSDPKTLYQCDTCGLLLISEATLTYHMRSHNIGFQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -